Collecting genomepy==0.5.0 1 location(s) to search for versions of genomepy: * https://pypi.python.org/simple/genomepy/ Getting page https://pypi.python.org/simple/genomepy/ Analyzing links from page https://pypi.python.org/simple/genomepy/ Found link https://pypi.python.org/packages/10/64/a5bcce920dbd4d139e719692932e2b3b390b7fa843eb4d2c7dac8f46c16c/genomepy-0.2.2.tar.gz#md5=a708f663ee52aef4353bc118bee00b5a (from https://pypi.python.org/simple/genomepy/), version: 0.2.2 Found link https://pypi.python.org/packages/5a/a0/e2be6ce2c7bf329fa6cafe2885056bcb6f2454b89770d12c4680b5aa6045/genomepy-0.4.0.tar.gz#md5=67bc7d86c8562cb9ce34222c040a762c (from https://pypi.python.org/simple/genomepy/), version: 0.4.0 Found link https://pypi.python.org/packages/73/5c/c9658f1df6016c0d9e3fa1b8bf9e02b5cff3402e9a18695ce23c778506ae/genomepy-0.2.3.tar.gz#md5=ebafa788c55751068cd3743a90c46359 (from https://pypi.python.org/simple/genomepy/), version: 0.2.3 Found link https://pypi.python.org/packages/7b/e5/bad5d131f07fe68cdfc4284da5aa003751b8a29295b0e07b652d3990d93f/genomepy-0.5.0.tar.gz#md5=69dfa235eea3cff5971aad8dbaa103ad (from https://pypi.python.org/simple/genomepy/), version: 0.5.0 Found link https://pypi.python.org/packages/7c/b2/e5bd26c22ac60d21cebfce9716f3817927e675d31bf9e8a6f2e9d28161cc/genomepy-0.3.1.tar.gz#md5=7327461d731abd4275f48981be5591dd (from https://pypi.python.org/simple/genomepy/), version: 0.3.1 Found link https://pypi.python.org/packages/8b/f7/2ff0b588d992e55b034d2dd38d0c2b25b3101edb14f49aae15969f5162ad/genomepy-0.2.1.tar.gz#md5=6bfae8006759c383dbc22490df20432f (from https://pypi.python.org/simple/genomepy/), version: 0.2.1 Found link https://pypi.python.org/packages/8d/12/5a10995e86898b161b1e2e402adbe48e3d1b1e186dc7da520371fff8ee82/genomepy-0.3.0.tar.gz#md5=9e4e0429528e3e837092c01831076067 (from https://pypi.python.org/simple/genomepy/), version: 0.3.0 Found link https://pypi.python.org/packages/c0/49/e4aa0b64eda667bbd4c6fb3d0b6c6fb0d4a0ba03ceda3a4409a60f76d41b/genomepy-0.0.1.tar.gz#md5=a2f0dfefb1288aa201b23c7d4e2b0945 (from https://pypi.python.org/simple/genomepy/), version: 0.0.1 Found link https://pypi.python.org/packages/f5/51/e073d9fd991f7048af595c0655947eb6b94aea4e8d6a498bb8fc6558b7c3/genomepy-0.0.2.tar.gz#md5=cb3ae6e446eb06351d14915f48a8e949 (from https://pypi.python.org/simple/genomepy/), version: 0.0.2 Using version 0.5.0 (newest of versions: 0.5.0) Downloading genomepy-0.5.0.tar.gz Downloading from URL https://pypi.python.org/packages/7b/e5/bad5d131f07fe68cdfc4284da5aa003751b8a29295b0e07b652d3990d93f/genomepy-0.5.0.tar.gz#md5=69dfa235eea3cff5971aad8dbaa103ad (from https://pypi.python.org/simple/genomepy/) Running setup.py (path:/tmp/pip-build-4rda7w5y/genomepy/setup.py) egg_info for package genomepy Running command python setup.py egg_info running egg_info creating pip-egg-info/genomepy.egg-info writing dependency_links to pip-egg-info/genomepy.egg-info/dependency_links.txt writing top-level names to pip-egg-info/genomepy.egg-info/top_level.txt writing entry points to pip-egg-info/genomepy.egg-info/entry_points.txt writing requirements to pip-egg-info/genomepy.egg-info/requires.txt writing pip-egg-info/genomepy.egg-info/PKG-INFO writing manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt' Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- Source in /tmp/pip-build-4rda7w5y/genomepy has version 0.5.0, which satisfies requirement genomepy==0.5.0 from https://pypi.python.org/packages/7b/e5/bad5d131f07fe68cdfc4284da5aa003751b8a29295b0e07b652d3990d93f/genomepy-0.5.0.tar.gz#md5=69dfa235eea3cff5971aad8dbaa103ad Building wheels for collected packages: genomepy Running setup.py bdist_wheel for genomepy: started Destination directory: /tmp/tmpd4jionsepip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-4rda7w5y/genomepy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpd4jionsepip-wheel- Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/genomepy copying genomepy/exceptions.py -> build/lib/genomepy copying genomepy/__about__.py -> build/lib/genomepy copying genomepy/plugin.py -> build/lib/genomepy copying genomepy/__init__.py -> build/lib/genomepy copying genomepy/provider.py -> build/lib/genomepy copying genomepy/cli.py -> build/lib/genomepy copying genomepy/utils.py -> build/lib/genomepy copying genomepy/functions.py -> build/lib/genomepy creating build/lib/genomepy/plugins copying genomepy/plugins/minimap2.py -> build/lib/genomepy/plugins copying genomepy/plugins/gaps.py -> build/lib/genomepy/plugins copying genomepy/plugins/bwa.py -> build/lib/genomepy/plugins copying genomepy/plugins/gmap.py -> build/lib/genomepy/plugins copying genomepy/plugins/hisat2.py -> build/lib/genomepy/plugins copying genomepy/plugins/__init__.py -> build/lib/genomepy/plugins copying genomepy/plugins/bowtie2.py -> build/lib/genomepy/plugins copying genomepy/plugins/sizes.py -> build/lib/genomepy/plugins creating build/lib/genomepy/cfg copying genomepy/cfg/default.yaml -> build/lib/genomepy/cfg installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/exceptions.py -> build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/__about__.py -> build/bdist.linux-armv7l/wheel/genomepy creating build/bdist.linux-armv7l/wheel/genomepy/cfg copying build/lib/genomepy/cfg/default.yaml -> build/bdist.linux-armv7l/wheel/genomepy/cfg copying build/lib/genomepy/plugin.py -> build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/__init__.py -> build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/provider.py -> build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/cli.py -> build/bdist.linux-armv7l/wheel/genomepy creating build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/minimap2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/gaps.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/bwa.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/gmap.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/hisat2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/bowtie2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/plugins/sizes.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins copying build/lib/genomepy/utils.py -> build/bdist.linux-armv7l/wheel/genomepy copying build/lib/genomepy/functions.py -> build/bdist.linux-armv7l/wheel/genomepy running install_egg_info running egg_info writing requirements to genomepy.egg-info/requires.txt writing top-level names to genomepy.egg-info/top_level.txt writing entry points to genomepy.egg-info/entry_points.txt writing dependency_links to genomepy.egg-info/dependency_links.txt writing genomepy.egg-info/PKG-INFO reading manifest file 'genomepy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'genomepy.egg-info/SOURCES.txt' Copying genomepy.egg-info to build/bdist.linux-armv7l/wheel/genomepy-0.5.0-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/genomepy-0.5.0.dist-info/WHEEL Running setup.py bdist_wheel for genomepy: finished with status 'done' Stored in directory: /tmp/tmp_pqjfjkx Successfully built genomepy Cleaning up... Removing source in /tmp/pip-build-4rda7w5y/genomepy