Collecting checkm-genome==1.0.10 1 location(s) to search for versions of checkm-genome: * https://pypi.python.org/simple/checkm-genome/ Getting page https://pypi.python.org/simple/checkm-genome/ Analyzing links from page https://pypi.python.org/simple/checkm-genome/ Found link https://pypi.python.org/packages/0f/28/0c0e639dbdabf29808615ffe781675b8c8376ffc176e3ec9060c53ee99bd/checkm-genome-1.0.3.tar.gz#md5=316f98ec75e0c0907217430a75518079 (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.3 Found link https://pypi.python.org/packages/28/18/bfa95eace6e39c78c3d59e9409a6a6bf5d6b8eb02a84fe8f1587a604cccc/checkm-genome-0.9.0.tar.gz#md5=c6fb94cc0bc0e192f3b4b1283980d68b (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.0 Found link https://pypi.python.org/packages/41/31/d1cbd54a0356a8cfabe59a3d932dc5bfc25c8a62d21e8a6c95ef5ee84a5d/checkm-genome-0.9.1.tar.gz#md5=7d547e9a217f5f3762d718622b3668e6 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.1 Found link https://pypi.python.org/packages/55/62/35b519866fff020ef0b213e0665dc4d43cb1bb588a6575dd3270d3708095/checkm-genome-1.0.7.tar.gz#md5=e62f95b73c11cb4b68ce32d840a5e17e (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.7 Found link https://pypi.python.org/packages/5c/d0/884dcda6dc25ec5b1a0dfb781b67dbf4c9cfbe2ab3ef3935b3d4cbbcd0e3/checkm-genome-0.9.5.tar.gz#md5=ddacc5510b4776e4e5719e5dee4a1de0 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.5 Found link https://pypi.python.org/packages/5f/2b/d0283c04c98b60afb23a8e4220f4c99bdb5a5a4fa08e928d1e16cefc8c65/checkm-genome-0.9.7.tar.gz#md5=4499b236903c412274693f6bc75c1721 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.7 Found link https://pypi.python.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz#md5=da5e597844c94638202df78f6b143634 (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.10 Found link https://pypi.python.org/packages/ae/51/c5173a5940663f1a25311584f322ccfd22148097eea896f3fe96071292a6/checkm-genome-0.9.4.tar.gz#md5=1b5699c943a784ce8c380e6a501a7537 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.4 Found link https://pypi.python.org/packages/af/c9/61e0998688374f8155107e3e81cf8920658b72e2e97df8595beaf6dad498/checkm-genome-0.9.2.tar.gz#md5=56ef2927210280049849460d01ecafe9 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.2 Found link https://pypi.python.org/packages/d0/17/9442a51f37f3bb6f112b3dc03a6aaaca3417ec5ade8208abbccec7906757/checkm-genome-1.0.5.tar.gz#md5=5b45f196f1741bc8ed6668d1e42f5b80 (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.5 Found link https://pypi.python.org/packages/d4/0b/6b2bbcea9bb373f458ece939f7d999bbeaf47f6562f7a5b459f5b3de0ef0/checkm-genome-1.0.1.tar.gz#md5=fb7c4cb9385f0589356c7957b5776e44 (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.1 Found link https://pypi.python.org/packages/da/37/38c9a10a61ed2657a798188c83674b813d90425c73091c0106b50ce18172/checkm-genome-1.0.11.tar.gz#md5=3058546ec324e2420cf72f0d2576114b (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.11 Found link https://pypi.python.org/packages/de/22/74f9a5f3c6716fb5df55e4ffe32addf3bf972771ee68e41d8b50f65bc45f/checkm-genome-1.0.2.tar.gz#md5=c06847a075937f48a234867beb63157a (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.2 Found link https://pypi.python.org/packages/e7/d4/18407c20a8f220428e9b2b42c9c5768321060965d790e2861b1a3550ac21/checkm-genome-1.0.8.tar.gz#md5=8c0db1b076574e80562d2e3cf659f749 (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.8 Found link https://pypi.python.org/packages/ec/7d/8ffd56d3ea47b908b869e7556f3ed2211bbd0f299ddb8bd34ee34c7cdfb2/checkm-genome-0.9.6.tar.gz#md5=7e6dda73e795f27e4366847a7e7f6206 (from https://pypi.python.org/simple/checkm-genome/), version: 0.9.6 Found link https://pypi.python.org/packages/fe/e1/7821a08e9c5462181f4768eff196ceeab5b6cfdf40b09874cd7d42bc733d/checkm-genome-1.0.4.tar.gz#md5=70dc3ea23425f8ad55460bfe2cc39a7b (from https://pypi.python.org/simple/checkm-genome/), version: 1.0.4 Using version 1.0.10 (newest of versions: 1.0.10) Downloading checkm-genome-1.0.10.tar.gz (116kB) Downloading from URL https://pypi.python.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz#md5=da5e597844c94638202df78f6b143634 (from https://pypi.python.org/simple/checkm-genome/) Running setup.py (path:/tmp/pip-build-w6pz4ft3/checkm-genome/setup.py) egg_info for package checkm-genome Running command python setup.py egg_info running egg_info creating pip-egg-info/checkm_genome.egg-info writing dependency_links to pip-egg-info/checkm_genome.egg-info/dependency_links.txt writing requirements to pip-egg-info/checkm_genome.egg-info/requires.txt writing pip-egg-info/checkm_genome.egg-info/PKG-INFO writing top-level names to pip-egg-info/checkm_genome.egg-info/top_level.txt writing manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt' Source in /tmp/pip-build-w6pz4ft3/checkm-genome has version 1.0.10, which satisfies requirement checkm-genome==1.0.10 from https://pypi.python.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz#md5=da5e597844c94638202df78f6b143634 Building wheels for collected packages: checkm-genome Running setup.py bdist_wheel for checkm-genome: started Destination directory: /tmp/tmp947q5fmrpip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-w6pz4ft3/checkm-genome/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmp947q5fmrpip-wheel- running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/checkm copying checkm/resultsParser.py -> build/lib/checkm copying checkm/customHelpFormatter.py -> build/lib/checkm copying checkm/checkmData.py -> build/lib/checkm copying checkm/main.py -> build/lib/checkm copying checkm/binComparer.py -> build/lib/checkm copying checkm/__init__.py -> build/lib/checkm copying checkm/hmmerModelParser.py -> build/lib/checkm copying checkm/treeParser.py -> build/lib/checkm copying checkm/binStatistics.py -> build/lib/checkm copying checkm/coverage.py -> build/lib/checkm copying checkm/binUnion.py -> build/lib/checkm copying checkm/coverageWindows.py -> build/lib/checkm copying checkm/profile.py -> build/lib/checkm copying checkm/aminoAcidIdentity.py -> build/lib/checkm copying checkm/merger.py -> build/lib/checkm copying checkm/ssuFinder.py -> build/lib/checkm copying checkm/pplacer.py -> build/lib/checkm copying checkm/markerGeneFinder.py -> build/lib/checkm copying checkm/timeKeeper.py -> build/lib/checkm copying checkm/taxonParser.py -> build/lib/checkm copying checkm/uniqueMarkers.py -> build/lib/checkm copying checkm/markerSets.py -> build/lib/checkm copying checkm/prodigal.py -> build/lib/checkm copying checkm/binTools.py -> build/lib/checkm copying checkm/PCA.py -> build/lib/checkm copying checkm/prettytable.py -> build/lib/checkm copying checkm/hmmerAligner.py -> build/lib/checkm copying checkm/manifestManager.py -> build/lib/checkm copying checkm/common.py -> build/lib/checkm copying checkm/defaultValues.py -> build/lib/checkm copying checkm/fileEntity.py -> build/lib/checkm copying checkm/unbinned.py -> build/lib/checkm copying checkm/genomicSignatures.py -> build/lib/checkm copying checkm/hmmer.py -> build/lib/checkm creating build/lib/checkm/plot copying checkm/plot/cumulativeLengthPlot.py -> build/lib/checkm/plot copying checkm/plot/distributionPlots.py -> build/lib/checkm/plot copying checkm/plot/gcBiasPlots.py -> build/lib/checkm/plot copying checkm/plot/lengthHistogram.py -> build/lib/checkm/plot copying checkm/plot/__init__.py -> build/lib/checkm/plot copying checkm/plot/AbstractPlot.py -> build/lib/checkm/plot copying checkm/plot/codingDensityPlots.py -> build/lib/checkm/plot copying checkm/plot/nxPlot.py -> build/lib/checkm/plot copying checkm/plot/tetraDistPlots.py -> build/lib/checkm/plot copying checkm/plot/markerGenePosPlot.py -> build/lib/checkm/plot copying checkm/plot/binQAPlot.py -> build/lib/checkm/plot copying checkm/plot/pcaPlot.py -> build/lib/checkm/plot copying checkm/plot/parallelCoordPlot.py -> build/lib/checkm/plot copying checkm/plot/gcPlots.py -> build/lib/checkm/plot creating build/lib/checkm/test copying checkm/test/test_seqUtils.py -> build/lib/checkm/test copying checkm/test/test_markerSets.py -> build/lib/checkm/test copying checkm/test/__init__.py -> build/lib/checkm/test copying checkm/test/test_ecoli.py -> build/lib/checkm/test copying checkm/test/test_taxonomyUtils.py -> build/lib/checkm/test copying checkm/test/test_binStatistics.py -> build/lib/checkm/test copying checkm/test/test_aminoAcidIdentity.py -> build/lib/checkm/test copying checkm/test/test_genomicSignatures.py -> build/lib/checkm/test creating build/lib/checkm/util copying checkm/util/taxonomyUtils.py -> build/lib/checkm/util copying checkm/util/__init__.py -> build/lib/checkm/util copying checkm/util/seqUtils.py -> build/lib/checkm/util copying checkm/util/pfam.py -> build/lib/checkm/util copying checkm/util/img.py -> build/lib/checkm/util copying checkm/VERSION -> build/lib/checkm copying checkm/DATA_CONFIG -> build/lib/checkm running build_scripts creating build/scripts-3.4 copying and adjusting bin/checkm -> build/scripts-3.4 changing mode of build/scripts-3.4/checkm from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/resultsParser.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/customHelpFormatter.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/checkmData.py -> build/bdist.linux-armv7l/wheel/checkm creating build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/cumulativeLengthPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/distributionPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/gcBiasPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/lengthHistogram.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/AbstractPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/codingDensityPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/nxPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/tetraDistPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/markerGenePosPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/binQAPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/pcaPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/parallelCoordPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/plot/gcPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot copying build/lib/checkm/main.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/binComparer.py -> build/bdist.linux-armv7l/wheel/checkm creating build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/util/taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/util/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/util/seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/util/pfam.py -> build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/util/img.py -> build/bdist.linux-armv7l/wheel/checkm/util copying build/lib/checkm/__init__.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/hmmerModelParser.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/treeParser.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/coverage.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/VERSION -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/binUnion.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/coverageWindows.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/profile.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/merger.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/DATA_CONFIG -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/ssuFinder.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/pplacer.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/markerGeneFinder.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/timeKeeper.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/taxonParser.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/uniqueMarkers.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/markerSets.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/prodigal.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/binTools.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/PCA.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/prettytable.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/hmmerAligner.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/manifestManager.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/common.py -> build/bdist.linux-armv7l/wheel/checkm creating build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_markerSets.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_ecoli.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/test/test_genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm/test copying build/lib/checkm/defaultValues.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/fileEntity.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/unbinned.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm copying build/lib/checkm/hmmer.py -> build/bdist.linux-armv7l/wheel/checkm running install_egg_info running egg_info creating checkm_genome.egg-info writing top-level names to checkm_genome.egg-info/top_level.txt writing requirements to checkm_genome.egg-info/requires.txt writing dependency_links to checkm_genome.egg-info/dependency_links.txt writing checkm_genome.egg-info/PKG-INFO writing manifest file 'checkm_genome.egg-info/SOURCES.txt' reading manifest file 'checkm_genome.egg-info/SOURCES.txt' writing manifest file 'checkm_genome.egg-info/SOURCES.txt' Copying checkm_genome.egg-info to build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10.data creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10.data/scripts copying build/scripts-3.4/checkm -> build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10.data/scripts changing mode of build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10.data/scripts/checkm to 755 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.10.dist-info/WHEEL Running setup.py bdist_wheel for checkm-genome: finished with status 'done' Stored in directory: /tmp/tmp_7umu223 Successfully built checkm-genome Cleaning up... Removing source in /tmp/pip-build-w6pz4ft3/checkm-genome