Collecting mhcflurry==1.1.0 1 location(s) to search for versions of mhcflurry: * https://pypi.python.org/simple/mhcflurry/ Getting page https://pypi.python.org/simple/mhcflurry/ Analyzing links from page https://pypi.python.org/simple/mhcflurry/ Found link https://pypi.python.org/packages/2a/67/5b7689dbbe5a50aeeea3af8c23c1ed9bbe21b2d2d808cec1e9778f90da26/mhcflurry-1.0.0.tar.gz#md5=b75f11b7e68c4e83e2cb9680cfeb37b7 (from https://pypi.python.org/simple/mhcflurry/), version: 1.0.0 Found link https://pypi.python.org/packages/35/96/070fec2dc7f14885c55321725c51e0fd3cf5b0a735fbfafd2550f5dbb1c9/mhcflurry-0.2.0.tar.gz#md5=18d0b55627daef2ef63a255df131110f (from https://pypi.python.org/simple/mhcflurry/), version: 0.2.0 Found link https://pypi.python.org/packages/3b/70/8b01c23689e0b7fc76e60ef96c3ce96bc646b6bae39e4e24d9fc8592a1e1/mhcflurry-0.9.2.tar.gz#md5=36c88e672de7026bf3f5b651c7378ccc (from https://pypi.python.org/simple/mhcflurry/), version: 0.9.2 Found link https://pypi.python.org/packages/8a/07/1bc0f24d7d5d3bced5b807b33ef82a7cb871c626d58674bcb45b4bc3d0e2/mhcflurry-0.9.1.tar.gz#md5=38501a2a953234be864d5956d9c0d664 (from https://pypi.python.org/simple/mhcflurry/), version: 0.9.1 Found link https://pypi.python.org/packages/be/bb/361ede9170c41e0ef0c5926640572cce53aa53fee3f5d75f2a0329d186af/mhcflurry-1.1.0.tar.gz#md5=bb3853ed304dd48e35c5110968fd6bee (from https://pypi.python.org/simple/mhcflurry/), version: 1.1.0 Found link https://pypi.python.org/packages/c0/64/04096dac4409ba389ae2a473608b8c1b34722d9a11465f3fa427a8ee552f/mhcflurry-0.9.0.tar.gz#md5=fd5d1e31f61c8cd90212e4e23440a2dc (from https://pypi.python.org/simple/mhcflurry/), version: 0.9.0 Found link https://pypi.python.org/packages/e5/cb/3fa7a07b33cf3df2797a7579428262307c08b553fdedfa14daa21ba4c789/mhcflurry-0.0.8.tar.gz#md5=63c24e07765b87ad140ec295fb449e3e (from https://pypi.python.org/simple/mhcflurry/), version: 0.0.8 Using version 1.1.0 (newest of versions: 1.1.0) Downloading mhcflurry-1.1.0.tar.gz (41kB) Downloading from URL https://pypi.python.org/packages/be/bb/361ede9170c41e0ef0c5926640572cce53aa53fee3f5d75f2a0329d186af/mhcflurry-1.1.0.tar.gz#md5=bb3853ed304dd48e35c5110968fd6bee (from https://pypi.python.org/simple/mhcflurry/) Running setup.py (path:/tmp/pip-build-c8ksstzv/mhcflurry/setup.py) egg_info for package mhcflurry Running command python setup.py egg_info Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- WARNING:root:Conversion of long_description from MD to RST failed running egg_info creating pip-egg-info/mhcflurry.egg-info writing pip-egg-info/mhcflurry.egg-info/PKG-INFO writing requirements to pip-egg-info/mhcflurry.egg-info/requires.txt writing top-level names to pip-egg-info/mhcflurry.egg-info/top_level.txt writing dependency_links to pip-egg-info/mhcflurry.egg-info/dependency_links.txt writing entry points to pip-egg-info/mhcflurry.egg-info/entry_points.txt writing manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt' Source in /tmp/pip-build-c8ksstzv/mhcflurry has version 1.1.0, which satisfies requirement mhcflurry==1.1.0 from https://pypi.python.org/packages/be/bb/361ede9170c41e0ef0c5926640572cce53aa53fee3f5d75f2a0329d186af/mhcflurry-1.1.0.tar.gz#md5=bb3853ed304dd48e35c5110968fd6bee Building wheels for collected packages: mhcflurry Running setup.py bdist_wheel for mhcflurry: started Destination directory: /tmp/tmpkxi0on8dpip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-c8ksstzv/mhcflurry/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpkxi0on8dpip-wheel- Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- WARNING:root:Conversion of long_description from MD to RST failed running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/mhcflurry copying mhcflurry/downloads_command.py -> build/lib/mhcflurry copying mhcflurry/common.py -> build/lib/mhcflurry copying mhcflurry/custom_loss.py -> build/lib/mhcflurry copying mhcflurry/predict_command.py -> build/lib/mhcflurry copying mhcflurry/class1_affinity_predictor.py -> build/lib/mhcflurry copying mhcflurry/ensemble_centrality.py -> build/lib/mhcflurry copying mhcflurry/class1_neural_network.py -> build/lib/mhcflurry copying mhcflurry/amino_acid.py -> build/lib/mhcflurry copying mhcflurry/encodable_sequences.py -> build/lib/mhcflurry copying mhcflurry/percent_rank_transform.py -> build/lib/mhcflurry copying mhcflurry/allele_encoding.py -> build/lib/mhcflurry copying mhcflurry/train_allele_specific_models_command.py -> build/lib/mhcflurry copying mhcflurry/version.py -> build/lib/mhcflurry copying mhcflurry/__init__.py -> build/lib/mhcflurry copying mhcflurry/downloads.py -> build/lib/mhcflurry copying mhcflurry/hyperparameters.py -> build/lib/mhcflurry copying mhcflurry/regression_target.py -> build/lib/mhcflurry copying mhcflurry/scoring.py -> build/lib/mhcflurry copying mhcflurry/downloads.yml -> build/lib/mhcflurry installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/downloads_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/common.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/custom_loss.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/predict_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/class1_affinity_predictor.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/ensemble_centrality.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/class1_neural_network.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/amino_acid.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/encodable_sequences.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/percent_rank_transform.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/allele_encoding.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/train_allele_specific_models_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/version.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/downloads.yml -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/__init__.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/downloads.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/hyperparameters.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/regression_target.py -> build/bdist.linux-armv7l/wheel/mhcflurry copying build/lib/mhcflurry/scoring.py -> build/bdist.linux-armv7l/wheel/mhcflurry running install_egg_info running egg_info writing dependency_links to mhcflurry.egg-info/dependency_links.txt writing entry points to mhcflurry.egg-info/entry_points.txt writing mhcflurry.egg-info/PKG-INFO writing top-level names to mhcflurry.egg-info/top_level.txt writing requirements to mhcflurry.egg-info/requires.txt reading manifest file 'mhcflurry.egg-info/SOURCES.txt' writing manifest file 'mhcflurry.egg-info/SOURCES.txt' Copying mhcflurry.egg-info to build/bdist.linux-armv7l/wheel/mhcflurry-1.1.0-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/mhcflurry-1.1.0.dist-info/WHEEL Running setup.py bdist_wheel for mhcflurry: finished with status 'done' Stored in directory: /tmp/tmpt13rt49p Successfully built mhcflurry Cleaning up... Removing source in /tmp/pip-build-c8ksstzv/mhcflurry