Collecting isovar==0.7.4 1 location(s) to search for versions of isovar: * https://pypi.python.org/simple/isovar/ Getting page https://pypi.python.org/simple/isovar/ Analyzing links from page https://pypi.python.org/simple/isovar/ Found link https://pypi.python.org/packages/03/ac/1627b0180ffd2aff813066e0f455d65c49d13e1774e944dfc29726c247b0/isovar-0.2.2.tar.gz#md5=6b317921e157a5d8a07b2c8a1b922846 (from https://pypi.python.org/simple/isovar/), version: 0.2.2 Found link https://pypi.python.org/packages/09/7c/e80ccfcab66948d3c69dd70159439be76843cfcc08421a7b0e50248a6c34/isovar-0.0.6.tar.gz#md5=a4fd673f19801e58c75aa6037b87965b (from https://pypi.python.org/simple/isovar/), version: 0.0.6 Found link https://pypi.python.org/packages/0d/3c/f7108c0b1aba27d58b30075287874b88b194cc34ba8938a89cfdc40fbc19/isovar-0.7.4.tar.gz#md5=e798ff15621ae97dc0bac94550cccb5c (from https://pypi.python.org/simple/isovar/), version: 0.7.4 Found link https://pypi.python.org/packages/0e/f2/dc74cc8ce342d8ea408452ebda0ad498f1879c28e2d01b42f96e8ea7cba1/isovar-0.7.3.tar.gz#md5=7793fbca479170493a2f78fdf02cb424 (from https://pypi.python.org/simple/isovar/), version: 0.7.3 Found link https://pypi.python.org/packages/19/c9/6e8f71fb30ac619216f5ccbf0a444ba2cf19fc0e9955c5d1ef8984e01264/isovar-0.6.0.tar.gz#md5=f2bdb8e802ad15c5388eacb179bc438a (from https://pypi.python.org/simple/isovar/), version: 0.6.0 Found link https://pypi.python.org/packages/1d/1f/d51e079dd9a1d9c572405e64b25feffdcdeefac96786451d4caa1bab671e/isovar-0.1.5.tar.gz#md5=591ff3829b907c3a41ce29883bd03e23 (from https://pypi.python.org/simple/isovar/), version: 0.1.5 Found link https://pypi.python.org/packages/1e/5a/5dc4f54bb9d10f3bd3755b5e87bfd51b33f5c538b69af6d807509698a297/isovar-0.5.0.tar.gz#md5=1de4281900bb46185283abd95e755840 (from https://pypi.python.org/simple/isovar/), version: 0.5.0 Found link https://pypi.python.org/packages/27/84/9251647726f83d32a9af94b54e9faacd046b9ecca0cd415f436acde977b9/isovar-0.7.1.tar.gz#md5=dfb9e1589112abc507bdf0fee3d1cc0e (from https://pypi.python.org/simple/isovar/), version: 0.7.1 Found link https://pypi.python.org/packages/72/bf/82e36d137b0866be27e0a27c1545fa4fb0b519e1aac31734b239fff5bff9/isovar-0.2.3.tar.gz#md5=e427c8a8dbd61490c205057c9e9b03fc (from https://pypi.python.org/simple/isovar/), version: 0.2.3 Found link https://pypi.python.org/packages/a2/c7/c98501932e9bf937a69d9f13cd3cdc91b92936520f2f27d3c3961bf14c2f/isovar-0.6.1.tar.gz#md5=d3f837de936c7a9cf8302c3622e2d939 (from https://pypi.python.org/simple/isovar/), version: 0.6.1 Found link https://pypi.python.org/packages/ab/e1/110b3dab08491c53f28a69c65c9effd112c0ae4a9412a6ff3328655dee91/isovar-0.2.1.tar.gz#md5=867d845853d4305812ba334d15ec9740 (from https://pypi.python.org/simple/isovar/), version: 0.2.1 Found link https://pypi.python.org/packages/ac/c8/a208dbd44c8e1010147b662a62fc5cb4114024eebb5a47dd9da1beca8aa8/isovar-0.1.0.tar.gz#md5=a50462ca3773209bb0715b2907e7b7b6 (from https://pypi.python.org/simple/isovar/), version: 0.1.0 Found link https://pypi.python.org/packages/b0/1c/c0f91c7c46aac659e075d34e0d55a05c5dbfd38727a4ee39911f6bf7d1e6/isovar-0.7.2.tar.gz#md5=71eb01b930f8fd47af732a4727346b03 (from https://pypi.python.org/simple/isovar/), version: 0.7.2 Found link https://pypi.python.org/packages/b3/6e/66e364fe1888d0a1c57e34142d1a10c17c2a74fec1d2ac2229c7f8405ec3/isovar-0.7.0.tar.gz#md5=0d57cbfe86a50cfbca54eafcbb0d78ba (from https://pypi.python.org/simple/isovar/), version: 0.7.0 Found link https://pypi.python.org/packages/b6/80/350ac9b97f7c872d7f2422a11bdb228a0286661fe2983884724735bff630/isovar-0.0.5.tar.gz#md5=4ea76990f809a286ffb5bc628626919c (from https://pypi.python.org/simple/isovar/), version: 0.0.5 Found link https://pypi.python.org/packages/c9/a1/c06698d8df3d589ba44819394d4c78273c81d6472135fe96ce73b01f33b3/isovar-0.5.2.tar.gz#md5=1a96f66d7a9abac0f42e1a231b4d545c (from https://pypi.python.org/simple/isovar/), version: 0.5.2 Found link https://pypi.python.org/packages/d7/d7/b4749eb20a87bd034eae20ee564eb8d69a109a3c74ddfd0044a4ad9e4d0a/isovar-0.4.0.tar.gz#md5=f07f1a7aad400a1ea18802970b376a37 (from https://pypi.python.org/simple/isovar/), version: 0.4.0 Found link https://pypi.python.org/packages/ef/24/21c68468b0b1130123aadc8451be794806adf0ebc7a63f8eb0e0ad30fca3/isovar-0.2.4.tar.gz#md5=17093d3ae6c0ee0e25592518820ca9b7 (from https://pypi.python.org/simple/isovar/), version: 0.2.4 Found link https://pypi.python.org/packages/f8/2c/7217a7fe510804c536a379cf7e66cf92fb056bb5d9a552de1d4774d6fe12/isovar-0.1.3.tar.gz#md5=7998f3c4671041a485bb206af7016829 (from https://pypi.python.org/simple/isovar/), version: 0.1.3 Found link https://pypi.python.org/packages/ff/ae/5df86c7a7f4449949dfc43961e50ac47963582c303b40659a1762feb14c2/isovar-0.2.0.tar.gz#md5=268459572450c1a3f784f185f728c288 (from https://pypi.python.org/simple/isovar/), version: 0.2.0 Using version 0.7.4 (newest of versions: 0.7.4) Downloading isovar-0.7.4.tar.gz (62kB) Downloading from URL https://pypi.python.org/packages/0d/3c/f7108c0b1aba27d58b30075287874b88b194cc34ba8938a89cfdc40fbc19/isovar-0.7.4.tar.gz#md5=e798ff15621ae97dc0bac94550cccb5c (from https://pypi.python.org/simple/isovar/) Running setup.py (path:/tmp/pip-build-s2p62wsg/isovar/setup.py) egg_info for package isovar Running command python setup.py egg_info Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- WARNING:root:Conversion of long_description from MD to RST failed running egg_info creating pip-egg-info/isovar.egg-info writing top-level names to pip-egg-info/isovar.egg-info/top_level.txt writing requirements to pip-egg-info/isovar.egg-info/requires.txt writing pip-egg-info/isovar.egg-info/PKG-INFO writing dependency_links to pip-egg-info/isovar.egg-info/dependency_links.txt writing manifest file 'pip-egg-info/isovar.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/isovar.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/isovar.egg-info/SOURCES.txt' Source in /tmp/pip-build-s2p62wsg/isovar has version 0.7.4, which satisfies requirement isovar==0.7.4 from https://pypi.python.org/packages/0d/3c/f7108c0b1aba27d58b30075287874b88b194cc34ba8938a89cfdc40fbc19/isovar-0.7.4.tar.gz#md5=e798ff15621ae97dc0bac94550cccb5c Building wheels for collected packages: isovar Running setup.py bdist_wheel for isovar: started Destination directory: /tmp/tmpuivp4ffjpip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-s2p62wsg/isovar/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpuivp4ffjpip-wheel- Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- WARNING:root:Conversion of long_description from MD to RST failed running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/isovar copying isovar/common.py -> build/lib/isovar copying isovar/read_helpers.py -> build/lib/isovar copying isovar/reference_context.py -> build/lib/isovar copying isovar/protein_sequences.py -> build/lib/isovar copying isovar/variant_reads.py -> build/lib/isovar copying isovar/translation.py -> build/lib/isovar copying isovar/default_parameters.py -> build/lib/isovar copying isovar/allele_counts.py -> build/lib/isovar copying isovar/variant_sequences.py -> build/lib/isovar copying isovar/dna.py -> build/lib/isovar copying isovar/string_helpers.py -> build/lib/isovar copying isovar/variant_sequence_in_reading_frame.py -> build/lib/isovar copying isovar/allele_reads.py -> build/lib/isovar copying isovar/nucleotide_counts.py -> build/lib/isovar copying isovar/locus_reads.py -> build/lib/isovar copying isovar/genetic_code.py -> build/lib/isovar copying isovar/__init__.py -> build/lib/isovar copying isovar/value_object.py -> build/lib/isovar copying isovar/variant_helpers.py -> build/lib/isovar copying isovar/reference_coding_sequence_key.py -> build/lib/isovar copying isovar/assembly.py -> build/lib/isovar copying isovar/reference_sequence_key.py -> build/lib/isovar copying isovar/effect_prediction.py -> build/lib/isovar copying isovar/dataframe_builder.py -> build/lib/isovar creating build/lib/isovar/cli copying isovar/cli/reference_context.py -> build/lib/isovar/cli copying isovar/cli/protein_sequences.py -> build/lib/isovar/cli copying isovar/cli/translation.py -> build/lib/isovar/cli copying isovar/cli/variant_sequences.py -> build/lib/isovar/cli copying isovar/cli/rna_reads.py -> build/lib/isovar/cli copying isovar/cli/__init__.py -> build/lib/isovar/cli copying isovar/cli/logging.conf -> build/lib/isovar/cli running build_scripts creating build/scripts-3.4 copying and adjusting script/isovar-protein-sequences.py -> build/scripts-3.4 copying and adjusting script/isovar-translations.py -> build/scripts-3.4 copying and adjusting script/isovar-reference-contexts.py -> build/scripts-3.4 copying and adjusting script/isovar-allele-reads.py -> build/scripts-3.4 copying and adjusting script/isovar-allele-counts.py -> build/scripts-3.4 copying and adjusting script/isovar-variant-reads.py -> build/scripts-3.4 copying and adjusting script/isovar-variant-sequences.py -> build/scripts-3.4 changing mode of build/scripts-3.4/isovar-protein-sequences.py from 644 to 755 changing mode of build/scripts-3.4/isovar-translations.py from 644 to 755 changing mode of build/scripts-3.4/isovar-reference-contexts.py from 644 to 755 changing mode of build/scripts-3.4/isovar-allele-reads.py from 644 to 755 changing mode of build/scripts-3.4/isovar-allele-counts.py from 644 to 755 changing mode of build/scripts-3.4/isovar-variant-reads.py from 644 to 755 changing mode of build/scripts-3.4/isovar-variant-sequences.py from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/common.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/read_helpers.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/reference_context.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/protein_sequences.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/variant_reads.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/translation.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/default_parameters.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/allele_counts.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/variant_sequences.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/dna.py -> build/bdist.linux-armv7l/wheel/isovar creating build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/reference_context.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/protein_sequences.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/logging.conf -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/translation.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/variant_sequences.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/rna_reads.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/cli/__init__.py -> build/bdist.linux-armv7l/wheel/isovar/cli copying build/lib/isovar/string_helpers.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/variant_sequence_in_reading_frame.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/allele_reads.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/nucleotide_counts.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/locus_reads.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/genetic_code.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/__init__.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/value_object.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/variant_helpers.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/reference_coding_sequence_key.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/assembly.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/reference_sequence_key.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/effect_prediction.py -> build/bdist.linux-armv7l/wheel/isovar copying build/lib/isovar/dataframe_builder.py -> build/bdist.linux-armv7l/wheel/isovar running install_egg_info running egg_info writing requirements to isovar.egg-info/requires.txt writing top-level names to isovar.egg-info/top_level.txt writing dependency_links to isovar.egg-info/dependency_links.txt writing isovar.egg-info/PKG-INFO reading manifest file 'isovar.egg-info/SOURCES.txt' writing manifest file 'isovar.egg-info/SOURCES.txt' Copying isovar.egg-info to build/bdist.linux-armv7l/wheel/isovar-0.7.4-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/isovar-0.7.4.data creating build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-reference-contexts.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-translations.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-allele-reads.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-allele-counts.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-variant-sequences.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-protein-sequences.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts copying build/scripts-3.4/isovar-variant-reads.py -> build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-reference-contexts.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-translations.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-allele-reads.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-allele-counts.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-variant-sequences.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-protein-sequences.py to 755 changing mode of build/bdist.linux-armv7l/wheel/isovar-0.7.4.data/scripts/isovar-variant-reads.py to 755 creating build/bdist.linux-armv7l/wheel/isovar-0.7.4.dist-info/WHEEL Running setup.py bdist_wheel for isovar: finished with status 'done' Stored in directory: /tmp/tmpfv0_xear Successfully built isovar Cleaning up... Removing source in /tmp/pip-build-s2p62wsg/isovar