Collecting kipoi==0.2.2 1 location(s) to search for versions of kipoi: * https://pypi.python.org/simple/kipoi/ Getting page https://pypi.python.org/simple/kipoi/ Analyzing links from page https://pypi.python.org/simple/kipoi/ Found link https://pypi.python.org/packages/39/3e/afe197ea98098ecbe6f629af532afbcd8d18969e0ccd97e8ff3d80939a3f/kipoi-0.2.1.tar.gz#md5=8e9acb9543e03dd3a89e4a170a58a04f (from https://pypi.python.org/simple/kipoi/), version: 0.2.1 Found link https://pypi.python.org/packages/87/09/5986bd2d509d41c902762343362e66ba8af5024c3644110319b2b4968d1c/kipoi-0.2.2.tar.gz#md5=50a8915f0b782df3e519686d7dc6ad69 (from https://pypi.python.org/simple/kipoi/), version: 0.2.2 Found link https://pypi.python.org/packages/c3/20/3acfd6713bd05f87716c3960ff8fc7aa2f21610bb4bc866b07b83c65dc05/kipoi-0.0.1.tar.gz#md5=0d5d1686273853fac7cebf9a536b8811 (from https://pypi.python.org/simple/kipoi/), version: 0.0.1 Found link https://pypi.python.org/packages/e8/db/536249265d988733a0fc02cc6a549864c477fa91d48d230d750c2894ff21/kipoi-0.2.0.tar.gz#md5=25b63a75baca8b6d92359990453b6ac6 (from https://pypi.python.org/simple/kipoi/), version: 0.2.0 Using version 0.2.2 (newest of versions: 0.2.2) Downloading kipoi-0.2.2.tar.gz (1.9MB) Downloading from URL https://pypi.python.org/packages/87/09/5986bd2d509d41c902762343362e66ba8af5024c3644110319b2b4968d1c/kipoi-0.2.2.tar.gz#md5=50a8915f0b782df3e519686d7dc6ad69 (from https://pypi.python.org/simple/kipoi/) Running setup.py (path:/tmp/pip-build-98zkomns/kipoi/setup.py) egg_info for package kipoi Running command python setup.py egg_info Unable to convert REAMDE.md to rst using pypandoc running egg_info creating pip-egg-info/kipoi.egg-info writing pip-egg-info/kipoi.egg-info/PKG-INFO writing dependency_links to pip-egg-info/kipoi.egg-info/dependency_links.txt writing top-level names to pip-egg-info/kipoi.egg-info/top_level.txt writing requirements to pip-egg-info/kipoi.egg-info/requires.txt writing entry points to pip-egg-info/kipoi.egg-info/entry_points.txt writing manifest file 'pip-egg-info/kipoi.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/kipoi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- warning: no files found matching 'LICENSE' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no files found matching '*.rst' under directory 'docs' warning: no files found matching 'conf.py' under directory 'docs' warning: no files found matching 'make.bat' under directory 'docs' warning: no files found matching '*.gif' under directory 'docs' writing manifest file 'pip-egg-info/kipoi.egg-info/SOURCES.txt' Source in /tmp/pip-build-98zkomns/kipoi has version 0.2.2, which satisfies requirement kipoi==0.2.2 from https://pypi.python.org/packages/87/09/5986bd2d509d41c902762343362e66ba8af5024c3644110319b2b4968d1c/kipoi-0.2.2.tar.gz#md5=50a8915f0b782df3e519686d7dc6ad69 Building wheels for collected packages: kipoi Running setup.py bdist_wheel for kipoi: started Destination directory: /tmp/tmpogr1n1nypip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-98zkomns/kipoi/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpogr1n1nypip-wheel- Maybe try: sudo apt-get install pandoc See http://johnmacfarlane.net/pandoc/installing.html for installation options --------------------------------------------------------------- Unable to convert REAMDE.md to rst using pypandoc running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/kipoi copying kipoi/remote.py -> build/lib/kipoi copying kipoi/config.py -> build/lib/kipoi copying kipoi/data_utils.py -> build/lib/kipoi copying kipoi/pipeline.py -> build/lib/kipoi copying kipoi/model.py -> build/lib/kipoi copying kipoi/utils.py -> build/lib/kipoi copying kipoi/components.py -> build/lib/kipoi copying kipoi/conda.py -> build/lib/kipoi copying kipoi/data.py -> build/lib/kipoi copying kipoi/__init__.py -> build/lib/kipoi copying kipoi/__main__.py -> build/lib/kipoi copying kipoi/metadata.py -> build/lib/kipoi creating build/lib/kipoi/postprocessing copying kipoi/postprocessing/snv_predict.py -> build/lib/kipoi/postprocessing copying kipoi/postprocessing/components.py -> build/lib/kipoi/postprocessing copying kipoi/postprocessing/variant_effects.py -> build/lib/kipoi/postprocessing copying kipoi/postprocessing/__init__.py -> build/lib/kipoi/postprocessing creating build/lib/kipoi/cli copying kipoi/cli/env.py -> build/lib/kipoi/cli copying kipoi/cli/source_test.py -> build/lib/kipoi/cli copying kipoi/cli/ls.py -> build/lib/kipoi/cli copying kipoi/cli/__init__.py -> build/lib/kipoi/cli copying kipoi/cli/main.py -> build/lib/kipoi/cli copying kipoi/cli/postproc.py -> build/lib/kipoi/cli copying kipoi/cli/parser_utils.py -> build/lib/kipoi/cli creating build/lib/kipoi/external copying kipoi/external/__init__.py -> build/lib/kipoi/external creating build/lib/kipoi/postprocessing/utils copying kipoi/postprocessing/utils/io.py -> build/lib/kipoi/postprocessing/utils copying kipoi/postprocessing/utils/generic.py -> build/lib/kipoi/postprocessing/utils copying kipoi/postprocessing/utils/__init__.py -> build/lib/kipoi/postprocessing/utils copying kipoi/postprocessing/utils/parsers.py -> build/lib/kipoi/postprocessing/utils creating build/lib/kipoi/external/torch copying kipoi/external/torch/sampler.py -> build/lib/kipoi/external/torch copying kipoi/external/torch/data.py -> build/lib/kipoi/external/torch copying kipoi/external/torch/__init__.py -> build/lib/kipoi/external/torch creating build/lib/kipoi/external/related copying kipoi/external/related/dispatchers.py -> build/lib/kipoi/external/related copying kipoi/external/related/mixins.py -> build/lib/kipoi/external/related copying kipoi/external/related/converters.py -> build/lib/kipoi/external/related copying kipoi/external/related/fields.py -> build/lib/kipoi/external/related copying kipoi/external/related/__init__.py -> build/lib/kipoi/external/related running egg_info writing top-level names to kipoi.egg-info/top_level.txt writing kipoi.egg-info/PKG-INFO writing requirements to kipoi.egg-info/requires.txt writing dependency_links to kipoi.egg-info/dependency_links.txt writing entry points to kipoi.egg-info/entry_points.txt reading manifest file 'kipoi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENSE' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no files found matching '*.rst' under directory 'docs' warning: no files found matching 'conf.py' under directory 'docs' warning: no files found matching 'make.bat' under directory 'docs' warning: no files found matching '*.gif' under directory 'docs' writing manifest file 'kipoi.egg-info/SOURCES.txt' copying kipoi/logging.conf -> build/lib/kipoi creating build/lib/kipoi/model_template copying kipoi/model_template/README.md -> build/lib/kipoi/model_template copying kipoi/model_template/cookiecutter.json -> build/lib/kipoi/model_template creating build/lib/kipoi/model_template/hooks copying kipoi/model_template/hooks/pre_gen_project.py -> build/lib/kipoi/model_template/hooks creating build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/LICENSE -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/dataloader.py -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/dataloader.yaml -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/model.yaml -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/readme.md -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} copying kipoi/model_template/{{cookiecutter.model_name}}/{% if cookiecutter.model_type == 'custom' %}model.py{% endif %} -> build/lib/kipoi/model_template/{{cookiecutter.model_name}} creating build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files copying kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files/x_transformer.pkl -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files copying kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files/y_transformer.pkl -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files creating build/lib/kipoi/model_template/{{cookiecutter.model_name}}/example_files copying kipoi/model_template/{{cookiecutter.model_name}}/example_files/features.csv -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/example_files copying kipoi/model_template/{{cookiecutter.model_name}}/example_files/targets.csv -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/example_files creating build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying kipoi/model_template/{{cookiecutter.model_name}}/model_files/model.json -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying kipoi/model_template/{{cookiecutter.model_name}}/model_files/model.pkl -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying kipoi/model_template/{{cookiecutter.model_name}}/model_files/weights.h5 -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying kipoi/model_template/{{cookiecutter.model_name}}/model_files/weights.json -> build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/remote.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/config.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/data_utils.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/logging.conf -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/pipeline.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/model.py -> build/bdist.linux-armv7l/wheel/kipoi creating build/bdist.linux-armv7l/wheel/kipoi/postprocessing creating build/bdist.linux-armv7l/wheel/kipoi/postprocessing/utils copying build/lib/kipoi/postprocessing/utils/io.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing/utils copying build/lib/kipoi/postprocessing/utils/generic.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing/utils copying build/lib/kipoi/postprocessing/utils/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing/utils copying build/lib/kipoi/postprocessing/utils/parsers.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing/utils copying build/lib/kipoi/postprocessing/snv_predict.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing copying build/lib/kipoi/postprocessing/components.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing copying build/lib/kipoi/postprocessing/variant_effects.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing copying build/lib/kipoi/postprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/postprocessing creating build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/env.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/source_test.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/ls.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/main.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/postproc.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/cli/parser_utils.py -> build/bdist.linux-armv7l/wheel/kipoi/cli copying build/lib/kipoi/utils.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/components.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/conda.py -> build/bdist.linux-armv7l/wheel/kipoi creating build/bdist.linux-armv7l/wheel/kipoi/external creating build/bdist.linux-armv7l/wheel/kipoi/external/torch copying build/lib/kipoi/external/torch/sampler.py -> build/bdist.linux-armv7l/wheel/kipoi/external/torch copying build/lib/kipoi/external/torch/data.py -> build/bdist.linux-armv7l/wheel/kipoi/external/torch copying build/lib/kipoi/external/torch/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/external/torch creating build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/related/dispatchers.py -> build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/related/mixins.py -> build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/related/converters.py -> build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/related/fields.py -> build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/related/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/external/related copying build/lib/kipoi/external/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi/external copying build/lib/kipoi/data.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/__init__.py -> build/bdist.linux-armv7l/wheel/kipoi copying build/lib/kipoi/__main__.py -> build/bdist.linux-armv7l/wheel/kipoi creating build/bdist.linux-armv7l/wheel/kipoi/model_template copying build/lib/kipoi/model_template/cookiecutter.json -> build/bdist.linux-armv7l/wheel/kipoi/model_template creating build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader.py -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/readme.md -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/{% if cookiecutter.model_type == 'custom' %}model.py{% endif %} -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/LICENSE -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader.yaml -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} creating build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files/x_transformer.pkl -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files/y_transformer.pkl -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/dataloader_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model.yaml -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}} creating build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files/weights.json -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files/model.json -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files/weights.h5 -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/model_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/model_files/model.pkl -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/model_files creating build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/example_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/example_files/features.csv -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/example_files copying build/lib/kipoi/model_template/{{cookiecutter.model_name}}/example_files/targets.csv -> build/bdist.linux-armv7l/wheel/kipoi/model_template/{{cookiecutter.model_name}}/example_files copying build/lib/kipoi/model_template/README.md -> build/bdist.linux-armv7l/wheel/kipoi/model_template creating build/bdist.linux-armv7l/wheel/kipoi/model_template/hooks copying build/lib/kipoi/model_template/hooks/pre_gen_project.py -> build/bdist.linux-armv7l/wheel/kipoi/model_template/hooks copying build/lib/kipoi/metadata.py -> build/bdist.linux-armv7l/wheel/kipoi running install_egg_info Copying kipoi.egg-info to build/bdist.linux-armv7l/wheel/kipoi-0.2.2-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/kipoi-0.2.2.dist-info/WHEEL Running setup.py bdist_wheel for kipoi: finished with status 'done' Stored in directory: /tmp/tmp4k1vak0h Successfully built kipoi Cleaning up... Removing source in /tmp/pip-build-98zkomns/kipoi