Collecting gtdbtk==0.0.8b1 1 location(s) to search for versions of gtdbtk: * https://pypi.python.org/simple/gtdbtk/ Getting page https://pypi.python.org/simple/gtdbtk/ Analyzing links from page https://pypi.org/simple/gtdbtk/ Found link https://files.pythonhosted.org/packages/77/1d/a47e727062761ea6108b1be340d24c711131df11415d82cdb30bcb51738b/gtdbtk-0.0.1.tar.gz#sha256=3f9a367bf64dc907226c2ac5f39204080fa5f305a995dcfa183ec0da6f4187a8 (from https://pypi.org/simple/gtdbtk/), version: 0.0.1 Found link https://files.pythonhosted.org/packages/78/fc/021b3e4fc9fc1a8d8596ccf703ee4f5abd97b496bc714a9bfc69332e913e/gtdbtk-0.0.2.tar.gz#sha256=b350aa8766a772509197a361646104b17dd106cf834fb9ea517c1924f5a8d345 (from https://pypi.org/simple/gtdbtk/), version: 0.0.2 Found link https://files.pythonhosted.org/packages/b8/55/a62d05d6a2d35a6e9f2247586a77f8033eaeeffb8e8d4db6511252c8a59b/gtdbtk-0.0.3.tar.gz#sha256=55d6be274b732fa9bda5682892900ad0edc06a32f44db1fd5990910c206692b8 (from https://pypi.org/simple/gtdbtk/), version: 0.0.3 Found link https://files.pythonhosted.org/packages/88/3d/2dedbfdce682d2c73aebb1182835889222aecefac4072e205e885b601be5/gtdbtk-0.0.4b0.tar.gz#sha256=39e82b23287c42e89b097b7aa163425a46b8616f2ec356d6b9fa5b1dccd85984 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b0 Found link https://files.pythonhosted.org/packages/e7/21/7b30d68267c9ed81610a37c8fdac4b53f7090f9511d963a54754ec49d521/gtdbtk-0.0.4b1.tar.gz#sha256=eb4de226ccd8f266cc31fe11f2df8d8582cfd7164d7b3b4bf08cf97e0acf5004 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b1 Found link https://files.pythonhosted.org/packages/d1/f0/970559d46438a2004ccaa4199491188afc1bb13304fb899b26a3530ed841/gtdbtk-0.0.4b2.tar.gz#sha256=a92edcfd6f7e15b3aad5154d10f08798417d49df4634b7e9165c0e0fe55f35f0 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b2 Found link https://files.pythonhosted.org/packages/e0/47/a9610df19e2bcf2782fc1ee29e5f85452b20a22d6f80581a23e3c0111c52/gtdbtk-0.0.4b3.tar.gz#sha256=c98f0847a434e9f88cfaaa33b11b99f97123e6982a59d90a7291370f3cc2cc46 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b3 Found link https://files.pythonhosted.org/packages/bf/f1/ebd7ba5d9ac68fc00ec0f7a69b52111d945a70f836dd4ba975600b088a98/gtdbtk-0.0.5.tar.gz#sha256=116c8aff980e2af0d18cf79a5ce452cb78cee11c226425554c9b6f2b2969ec27 (from https://pypi.org/simple/gtdbtk/), version: 0.0.5 Found link https://files.pythonhosted.org/packages/ca/7c/fc51570da6722bd31e310bb1ac218cb9d839dfae5d5e94d0ea3666402812/gtdbtk-0.0.6.tar.gz#sha256=e83a8ec329637753a4f7fc4672ae89442aa464a7daba55067cbf05ff195ae8c9 (from https://pypi.org/simple/gtdbtk/), version: 0.0.6 Found link https://files.pythonhosted.org/packages/68/72/fdfc81336d6a94e8f286f562bc265e5d215f653f5d08d91689b6cb69a6cb/gtdbtk-0.0.7.tar.gz#sha256=6fa59cd7cb19aee52b82b179bb6efa7ba00a22b9c2317f9d01837e1e35d4a1e0 (from https://pypi.org/simple/gtdbtk/), version: 0.0.7 Found link https://files.pythonhosted.org/packages/00/bb/2c2c4a00d4ca637be0daa7ac6bca99011afa8c42de7148c4e5dd6fc28141/gtdbtk-0.0.8b1.tar.gz#sha256=09183582b140dd0f40bda9db70e1f49347934c61cc2deab7214a183b915a0057 (from https://pypi.org/simple/gtdbtk/), version: 0.0.8b1 Using version 0.0.8b1 (newest of versions: 0.0.8b1) Downloading https://files.pythonhosted.org/packages/00/bb/2c2c4a00d4ca637be0daa7ac6bca99011afa8c42de7148c4e5dd6fc28141/gtdbtk-0.0.8b1.tar.gz (70kB) Downloading from URL https://files.pythonhosted.org/packages/00/bb/2c2c4a00d4ca637be0daa7ac6bca99011afa8c42de7148c4e5dd6fc28141/gtdbtk-0.0.8b1.tar.gz#sha256=09183582b140dd0f40bda9db70e1f49347934c61cc2deab7214a183b915a0057 (from https://pypi.org/simple/gtdbtk/) Running setup.py (path:/tmp/pip-build-ccwotkml/gtdbtk/setup.py) egg_info for package gtdbtk Running command python setup.py egg_info running egg_info creating pip-egg-info/gtdbtk.egg-info writing top-level names to pip-egg-info/gtdbtk.egg-info/top_level.txt writing requirements to pip-egg-info/gtdbtk.egg-info/requires.txt writing pip-egg-info/gtdbtk.egg-info/PKG-INFO writing dependency_links to pip-egg-info/gtdbtk.egg-info/dependency_links.txt writing manifest file 'pip-egg-info/gtdbtk.egg-info/SOURCES.txt' package init file 'gtdbtk/external/Bio/Pfam/Active_site/__init__.py' not found (or not a regular file) package init file 'gtdbtk/external/Bio/Pfam/HMM/__init__.py' not found (or not a regular file) package init file 'gtdbtk/external/Bio/Pfam/Scan/__init__.py' not found (or not a regular file) reading manifest file 'pip-egg-info/gtdbtk.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'config.py' found anywhere in distribution writing manifest file 'pip-egg-info/gtdbtk.egg-info/SOURCES.txt' Source in /tmp/pip-build-ccwotkml/gtdbtk has version 0.0.8b1, which satisfies requirement gtdbtk==0.0.8b1 from https://files.pythonhosted.org/packages/00/bb/2c2c4a00d4ca637be0daa7ac6bca99011afa8c42de7148c4e5dd6fc28141/gtdbtk-0.0.8b1.tar.gz#sha256=09183582b140dd0f40bda9db70e1f49347934c61cc2deab7214a183b915a0057 Building wheels for collected packages: gtdbtk Running setup.py bdist_wheel for gtdbtk: started Destination directory: /tmp/tmpicgsjo90pip-wheel- Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-ccwotkml/gtdbtk/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpicgsjo90pip-wheel- running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/gtdbtk copying gtdbtk/tools.py -> build/lib/gtdbtk copying gtdbtk/reroot_tree.py -> build/lib/gtdbtk copying gtdbtk/relative_distance.py -> build/lib/gtdbtk copying gtdbtk/__init__.py -> build/lib/gtdbtk copying gtdbtk/main.py -> build/lib/gtdbtk copying gtdbtk/classify.py -> build/lib/gtdbtk copying gtdbtk/markers.py -> build/lib/gtdbtk creating build/lib/gtdbtk/config copying gtdbtk/config/config_template.py -> build/lib/gtdbtk/config copying gtdbtk/config/config_metadata.py -> build/lib/gtdbtk/config copying gtdbtk/config/default_values.py -> build/lib/gtdbtk/config copying gtdbtk/config/__init__.py -> build/lib/gtdbtk/config creating build/lib/gtdbtk/external copying gtdbtk/external/tigrfam_search.py -> build/lib/gtdbtk/external copying gtdbtk/external/prodigal.py -> build/lib/gtdbtk/external copying gtdbtk/external/hmm_aligner.py -> build/lib/gtdbtk/external copying gtdbtk/external/__init__.py -> build/lib/gtdbtk/external copying gtdbtk/external/pfam_search.py -> build/lib/gtdbtk/external package init file 'gtdbtk/external/Bio/Pfam/Active_site/__init__.py' not found (or not a regular file) package init file 'gtdbtk/external/Bio/Pfam/HMM/__init__.py' not found (or not a regular file) package init file 'gtdbtk/external/Bio/Pfam/Scan/__init__.py' not found (or not a regular file) copying gtdbtk/VERSION -> build/lib/gtdbtk copying gtdbtk/external/pfam_search.pl -> build/lib/gtdbtk/external creating build/lib/gtdbtk/external/Bio creating build/lib/gtdbtk/external/Bio/Pfam creating build/lib/gtdbtk/external/Bio/Pfam/Active_site copying gtdbtk/external/Bio/Pfam/Active_site/as_search.pm -> build/lib/gtdbtk/external/Bio/Pfam/Active_site creating build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMM.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMIO.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMMatch.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMResults.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMResultsIO.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMSequence.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM copying gtdbtk/external/Bio/Pfam/HMM/HMMUnit.pm -> build/lib/gtdbtk/external/Bio/Pfam/HMM creating build/lib/gtdbtk/external/Bio/Pfam/Scan copying gtdbtk/external/Bio/Pfam/Scan/PfamScan.pm -> build/lib/gtdbtk/external/Bio/Pfam/Scan copying gtdbtk/external/Bio/Pfam/Scan/Seq.pm -> build/lib/gtdbtk/external/Bio/Pfam/Scan running build_scripts creating build/scripts-3.4 copying and adjusting bin/gtdbtk -> build/scripts-3.4 changing mode of build/scripts-3.4/gtdbtk from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/VERSION -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/tools.py -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/reroot_tree.py -> build/bdist.linux-armv7l/wheel/gtdbtk creating build/bdist.linux-armv7l/wheel/gtdbtk/external copying build/lib/gtdbtk/external/tigrfam_search.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external creating build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio creating build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam creating build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMM.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMResults.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMMatch.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMUnit.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMResultsIO.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMIO.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM copying build/lib/gtdbtk/external/Bio/Pfam/HMM/HMMSequence.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/HMM creating build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/Active_site copying build/lib/gtdbtk/external/Bio/Pfam/Active_site/as_search.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/Active_site creating build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/Scan copying build/lib/gtdbtk/external/Bio/Pfam/Scan/PfamScan.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/Scan copying build/lib/gtdbtk/external/Bio/Pfam/Scan/Seq.pm -> build/bdist.linux-armv7l/wheel/gtdbtk/external/Bio/Pfam/Scan copying build/lib/gtdbtk/external/prodigal.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external copying build/lib/gtdbtk/external/hmm_aligner.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external copying build/lib/gtdbtk/external/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external copying build/lib/gtdbtk/external/pfam_search.pl -> build/bdist.linux-armv7l/wheel/gtdbtk/external copying build/lib/gtdbtk/external/pfam_search.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external creating build/bdist.linux-armv7l/wheel/gtdbtk/config copying build/lib/gtdbtk/config/config_template.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config copying build/lib/gtdbtk/config/config_metadata.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config copying build/lib/gtdbtk/config/default_values.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config copying build/lib/gtdbtk/config/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config copying build/lib/gtdbtk/relative_distance.py -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/main.py -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/classify.py -> build/bdist.linux-armv7l/wheel/gtdbtk copying build/lib/gtdbtk/markers.py -> build/bdist.linux-armv7l/wheel/gtdbtk running install_egg_info running egg_info writing gtdbtk.egg-info/PKG-INFO writing dependency_links to gtdbtk.egg-info/dependency_links.txt writing requirements to gtdbtk.egg-info/requires.txt writing top-level names to gtdbtk.egg-info/top_level.txt reading manifest file 'gtdbtk.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'config.py' found anywhere in distribution writing manifest file 'gtdbtk.egg-info/SOURCES.txt' Copying gtdbtk.egg-info to build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1.data creating build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1.data/scripts copying build/scripts-3.4/gtdbtk -> build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1.data/scripts changing mode of build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1.data/scripts/gtdbtk to 755 creating build/bdist.linux-armv7l/wheel/gtdbtk-0.0.8b1.dist-info/WHEEL Running setup.py bdist_wheel for gtdbtk: finished with status 'done' Stored in directory: /tmp/tmpkqemqwki Successfully built gtdbtk Cleaning up... Removing source in /tmp/pip-build-ccwotkml/gtdbtk