Created temporary directory: /tmp/pip-ephem-wheel-cache-uso_qoy6 Created temporary directory: /tmp/pip-wheel-3h2l_3gl Looking in indexes: https://pypi.python.org/simple Collecting pythomics==0.3.45 1 location(s) to search for versions of pythomics: * https://pypi.python.org/simple/pythomics/ Getting page https://pypi.python.org/simple/pythomics/ Analyzing links from page https://pypi.org/simple/pythomics/ Found link https://files.pythonhosted.org/packages/12/d8/0c8683eea4f50e7f56594af44116e813dd0a1fd9a87044a530d8068109d6/pythomics-0.1.1.tar.gz#sha256=a5d1a927054db342621c6c45420b4d387f39901d48b6585fada728b60e55d219 (from https://pypi.org/simple/pythomics/), version: 0.1.1 Found link https://files.pythonhosted.org/packages/bf/45/cafdadb67cc77378c2c582b704bc969b2b2f21946f73782333f960ce3fd2/pythomics-0.1.2.tar.gz#sha256=b0e209367d36157c26051ad3ffb0810401903d8e1a2e8863be615b9443feeae7 (from https://pypi.org/simple/pythomics/), version: 0.1.2 Found link 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https://files.pythonhosted.org/packages/7b/f9/132720c57fad583de0753c42c09fad624a13b85f4a74b187811cd66ccd02/pythomics-0.3.43.tar.gz#sha256=ecaf8e02fb91e0ed909059a66c52463a6b93b396e6ada36d70e2b792efb0ae1e (from https://pypi.org/simple/pythomics/), version: 0.3.43 Found link https://files.pythonhosted.org/packages/e2/d9/9827ab27551762a658900c18360acbb4a9e8119e9b684f5f79ee20bc43d5/pythomics-0.3.44.tar.gz#sha256=28c7f6ea43275f48b7b8d55d8931de974950139342273606d5e5f78d440ad0c1 (from https://pypi.org/simple/pythomics/), version: 0.3.44 Found link https://files.pythonhosted.org/packages/46/7e/bab1d1db24d175ceded016d7e8a2e7c2623fd46e4be56949deb9c71843e3/pythomics-0.3.45.tar.gz#sha256=827539f8c13dba0a89a02d81e5636cb1d92ebea237e9fe4af255dc5eb630bb48 (from https://pypi.org/simple/pythomics/), version: 0.3.45 Using version 0.3.45 (newest of versions: 0.3.45) Created temporary directory: /tmp/pip-unpack-0cn49t6l Downloading https://files.pythonhosted.org/packages/46/7e/bab1d1db24d175ceded016d7e8a2e7c2623fd46e4be56949deb9c71843e3/pythomics-0.3.45.tar.gz (66kB) Downloading from URL https://files.pythonhosted.org/packages/46/7e/bab1d1db24d175ceded016d7e8a2e7c2623fd46e4be56949deb9c71843e3/pythomics-0.3.45.tar.gz#sha256=827539f8c13dba0a89a02d81e5636cb1d92ebea237e9fe4af255dc5eb630bb48 (from https://pypi.org/simple/pythomics/) Running setup.py (path:/tmp/pip-wheel-3h2l_3gl/pythomics/setup.py) egg_info for package pythomics Running command python setup.py egg_info running egg_info creating pip-egg-info/pythomics.egg-info writing requirements to pip-egg-info/pythomics.egg-info/requires.txt writing top-level names to pip-egg-info/pythomics.egg-info/top_level.txt writing dependency_links to pip-egg-info/pythomics.egg-info/dependency_links.txt writing pip-egg-info/pythomics.egg-info/PKG-INFO writing manifest file 'pip-egg-info/pythomics.egg-info/SOURCES.txt' warning: manifest_maker: standard file '-c' not found reading manifest file 'pip-egg-info/pythomics.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pip-egg-info/pythomics.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-3h2l_3gl/pythomics has version 0.3.45, which satisfies requirement pythomics==0.3.45 from https://files.pythonhosted.org/packages/46/7e/bab1d1db24d175ceded016d7e8a2e7c2623fd46e4be56949deb9c71843e3/pythomics-0.3.45.tar.gz#sha256=827539f8c13dba0a89a02d81e5636cb1d92ebea237e9fe4af255dc5eb630bb48 Building wheels for collected packages: pythomics Created temporary directory: /tmp/pip-wheel-4sqelyzc Running setup.py bdist_wheel for pythomics: started Destination directory: /tmp/pip-wheel-4sqelyzc Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-3h2l_3gl/pythomics/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-4sqelyzc running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pythomics copying pythomics/__init__.py -> build/lib/pythomics creating build/lib/pythomics/templates copying pythomics/templates/__init__.py -> build/lib/pythomics/templates creating build/lib/pythomics/utils copying pythomics/utils/__init__.py -> build/lib/pythomics/utils creating build/lib/pythomics/parsers copying pythomics/parsers/config.py -> build/lib/pythomics/parsers copying pythomics/parsers/fastq.py -> build/lib/pythomics/parsers copying pythomics/parsers/__init__.py -> build/lib/pythomics/parsers copying pythomics/parsers/fasta.py -> build/lib/pythomics/parsers creating build/lib/pythomics/transcriptomics copying pythomics/transcriptomics/__init__.py -> build/lib/pythomics/transcriptomics creating build/lib/pythomics/proteomics copying pythomics/proteomics/peptide.py -> build/lib/pythomics/proteomics copying pythomics/proteomics/digest.py -> build/lib/pythomics/proteomics copying pythomics/proteomics/config.py -> build/lib/pythomics/proteomics copying pythomics/proteomics/structures.py -> build/lib/pythomics/proteomics copying pythomics/proteomics/__init__.py -> build/lib/pythomics/proteomics copying pythomics/proteomics/parsers.py -> build/lib/pythomics/proteomics creating build/lib/pythomics/genomics copying pythomics/genomics/config.py -> build/lib/pythomics/genomics copying pythomics/genomics/structures.py -> build/lib/pythomics/genomics copying pythomics/genomics/__init__.py -> build/lib/pythomics/genomics copying pythomics/genomics/parsers.py -> build/lib/pythomics/genomics running egg_info writing top-level names to pythomics.egg-info/top_level.txt writing requirements to pythomics.egg-info/requires.txt writing dependency_links to pythomics.egg-info/dependency_links.txt writing pythomics.egg-info/PKG-INFO warning: manifest_maker: standard file '-c' not found reading manifest file 'pythomics.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pythomics.egg-info/SOURCES.txt' running build_scripts creating build/scripts-3.4 copying and adjusting scripts/fastadigest.py -> build/scripts-3.4 copying and adjusting scripts/fastadigeststats.py -> build/scripts-3.4 copying and adjusting scripts/incorporateVCF.py -> build/scripts-3.4 copying and adjusting scripts/fetchOrfs.py -> build/scripts-3.4 copying and adjusting scripts/incorporateGFF.py -> build/scripts-3.4 copying and adjusting scripts/proteinInference.py -> build/scripts-3.4 copying and adjusting scripts/featureCollapser.py -> build/scripts-3.4 copying and adjusting scripts/fastxTrimmer.py -> build/scripts-3.4 copying and adjusting scripts/intersectFiles.py -> build/scripts-3.4 copying and adjusting scripts/junctionalReads.py -> build/scripts-3.4 copying and adjusting scripts/ptmSummary.py -> build/scripts-3.4 changing mode of build/scripts-3.4/fastadigest.py from 644 to 755 changing mode of build/scripts-3.4/fastadigeststats.py from 644 to 755 changing mode of build/scripts-3.4/incorporateVCF.py from 644 to 755 changing mode of build/scripts-3.4/fetchOrfs.py from 644 to 755 changing mode of build/scripts-3.4/incorporateGFF.py from 644 to 755 changing mode of build/scripts-3.4/proteinInference.py from 644 to 755 changing mode of build/scripts-3.4/featureCollapser.py from 644 to 755 changing mode of build/scripts-3.4/fastxTrimmer.py from 644 to 755 changing mode of build/scripts-3.4/intersectFiles.py from 644 to 755 changing mode of build/scripts-3.4/junctionalReads.py from 644 to 755 changing mode of build/scripts-3.4/ptmSummary.py from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/pythomics creating build/bdist.linux-armv7l/wheel/pythomics/templates copying build/lib/pythomics/templates/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/templates creating build/bdist.linux-armv7l/wheel/pythomics/utils copying build/lib/pythomics/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/utils creating build/bdist.linux-armv7l/wheel/pythomics/parsers copying build/lib/pythomics/parsers/config.py -> build/bdist.linux-armv7l/wheel/pythomics/parsers copying build/lib/pythomics/parsers/fastq.py -> build/bdist.linux-armv7l/wheel/pythomics/parsers copying build/lib/pythomics/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/parsers copying build/lib/pythomics/parsers/fasta.py -> build/bdist.linux-armv7l/wheel/pythomics/parsers creating build/bdist.linux-armv7l/wheel/pythomics/transcriptomics copying build/lib/pythomics/transcriptomics/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/transcriptomics creating build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/peptide.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/digest.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/config.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/structures.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/proteomics/parsers.py -> build/bdist.linux-armv7l/wheel/pythomics/proteomics copying build/lib/pythomics/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics creating build/bdist.linux-armv7l/wheel/pythomics/genomics copying build/lib/pythomics/genomics/config.py -> build/bdist.linux-armv7l/wheel/pythomics/genomics copying build/lib/pythomics/genomics/structures.py -> build/bdist.linux-armv7l/wheel/pythomics/genomics copying build/lib/pythomics/genomics/__init__.py -> build/bdist.linux-armv7l/wheel/pythomics/genomics copying build/lib/pythomics/genomics/parsers.py -> build/bdist.linux-armv7l/wheel/pythomics/genomics running install_egg_info Copying pythomics.egg-info to build/bdist.linux-armv7l/wheel/pythomics-0.3.45.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data creating build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/proteinInference.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/fetchOrfs.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/fastxTrimmer.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/incorporateGFF.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/fastadigest.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/incorporateVCF.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/intersectFiles.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/junctionalReads.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/featureCollapser.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/ptmSummary.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts copying build/scripts-3.4/fastadigeststats.py -> build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/proteinInference.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/fetchOrfs.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/fastxTrimmer.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/incorporateGFF.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/fastadigest.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/incorporateVCF.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/intersectFiles.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/junctionalReads.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/featureCollapser.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/ptmSummary.py to 755 changing mode of build/bdist.linux-armv7l/wheel/pythomics-0.3.45.data/scripts/fastadigeststats.py to 755 creating build/bdist.linux-armv7l/wheel/pythomics-0.3.45.dist-info/WHEEL creating '/tmp/pip-wheel-4sqelyzc/pythomics-0.3.45-py3-none-any.whl' and adding '.' to it adding 'pythomics/__init__.py' adding 'pythomics/genomics/__init__.py' adding 'pythomics/genomics/config.py' adding 'pythomics/genomics/parsers.py' adding 'pythomics/genomics/structures.py' adding 'pythomics/parsers/__init__.py' adding 'pythomics/parsers/config.py' adding 'pythomics/parsers/fasta.py' adding 'pythomics/parsers/fastq.py' adding 'pythomics/proteomics/__init__.py' adding 'pythomics/proteomics/config.py' adding 'pythomics/proteomics/digest.py' adding 'pythomics/proteomics/parsers.py' adding 'pythomics/proteomics/peptide.py' adding 'pythomics/proteomics/structures.py' adding 'pythomics/templates/__init__.py' adding 'pythomics/transcriptomics/__init__.py' adding 'pythomics/utils/__init__.py' adding 'pythomics-0.3.45.data/scripts/fastadigest.py' adding 'pythomics-0.3.45.data/scripts/fastadigeststats.py' adding 'pythomics-0.3.45.data/scripts/fastxTrimmer.py' adding 'pythomics-0.3.45.data/scripts/featureCollapser.py' adding 'pythomics-0.3.45.data/scripts/fetchOrfs.py' adding 'pythomics-0.3.45.data/scripts/incorporateGFF.py' adding 'pythomics-0.3.45.data/scripts/incorporateVCF.py' adding 'pythomics-0.3.45.data/scripts/intersectFiles.py' adding 'pythomics-0.3.45.data/scripts/junctionalReads.py' adding 'pythomics-0.3.45.data/scripts/proteinInference.py' adding 'pythomics-0.3.45.data/scripts/ptmSummary.py' adding 'pythomics-0.3.45.dist-info/pbr.json' adding 'pythomics-0.3.45.dist-info/top_level.txt' adding 'pythomics-0.3.45.dist-info/WHEEL' adding 'pythomics-0.3.45.dist-info/METADATA' adding 'pythomics-0.3.45.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for pythomics: finished with status 'done' Stored in directory: /tmp/tmprc4mitgq Successfully built pythomics Cleaning up... Removing source in /tmp/pip-wheel-3h2l_3gl/pythomics