Created temporary directory: /tmp/pip-ephem-wheel-cache-qiihv1c7 Created temporary directory: /tmp/pip-req-tracker-axsgww1c Created requirements tracker '/tmp/pip-req-tracker-axsgww1c' Created temporary directory: /tmp/pip-wheel-jsri480d Looking in indexes: https://pypi.python.org/simple Collecting AdaptivePELE==1.5.1 1 location(s) to search for versions of AdaptivePELE: * https://pypi.python.org/simple/adaptivepele/ Getting page https://pypi.python.org/simple/adaptivepele/ Analyzing links from page https://pypi.org/simple/adaptivepele/ Found link https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 (from https://pypi.org/simple/adaptivepele/), version: 1.5.1 Using version 1.5.1 (newest of versions: 1.5.1) Created temporary directory: /tmp/pip-unpack-eax1kcsj Downloading https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz (3.0MB) Downloading from URL https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 (from https://pypi.org/simple/adaptivepele/) Added AdaptivePELE==1.5.1 from https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 to build tracker '/tmp/pip-req-tracker-axsgww1c' Running setup.py (path:/tmp/pip-wheel-jsri480d/AdaptivePELE/setup.py) egg_info for package AdaptivePELE Running command python setup.py egg_info running egg_info creating pip-egg-info/AdaptivePELE.egg-info writing dependency_links to pip-egg-info/AdaptivePELE.egg-info/dependency_links.txt writing pip-egg-info/AdaptivePELE.egg-info/PKG-INFO writing top-level names to pip-egg-info/AdaptivePELE.egg-info/top_level.txt writing requirements to pip-egg-info/AdaptivePELE.egg-info/requires.txt writing manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-jsri480d/AdaptivePELE has version 1.5.1, which satisfies requirement AdaptivePELE==1.5.1 from https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 Removed AdaptivePELE==1.5.1 from https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 from build tracker '/tmp/pip-req-tracker-axsgww1c' Building wheels for collected packages: AdaptivePELE Created temporary directory: /tmp/pip-wheel-zgb1whay Running setup.py bdist_wheel for AdaptivePELE: started Destination directory: /tmp/pip-wheel-zgb1whay Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-jsri480d/AdaptivePELE/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-zgb1whay running bdist_wheel running build running build_py creating build creating build/lib.linux-armv7l-3.5 creating build/lib.linux-armv7l-3.5/AdaptivePELE copying AdaptivePELE/adaptiveSampling.py -> build/lib.linux-armv7l-3.5/AdaptivePELE copying AdaptivePELE/runAllTests.py -> build/lib.linux-armv7l-3.5/AdaptivePELE copying AdaptivePELE/makeRelease.py -> build/lib.linux-armv7l-3.5/AdaptivePELE copying AdaptivePELE/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE copying AdaptivePELE/automateRoundsAdaptive.py -> build/lib.linux-armv7l-3.5/AdaptivePELE creating build/lib.linux-armv7l-3.5/AdaptivePELE/validator copying AdaptivePELE/validator/validatorBlockNames.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/validator copying AdaptivePELE/validator/controlFileValidator.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/validator copying AdaptivePELE/validator/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/validator creating build/lib.linux-armv7l-3.5/AdaptivePELE/constants copying AdaptivePELE/constants/symmetries.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/constants copying AdaptivePELE/constants/constants.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/constants copying AdaptivePELE/constants/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/constants copying AdaptivePELE/constants/blockNames.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/constants creating build/lib.linux-armv7l-3.5/AdaptivePELE/simulation copying AdaptivePELE/simulation/simulationTypes.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/simulation copying AdaptivePELE/simulation/simulationrunner.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/simulation copying AdaptivePELE/simulation/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/simulation creating build/lib.linux-armv7l-3.5/AdaptivePELE/atomset copying AdaptivePELE/atomset/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/atomset copying AdaptivePELE/atomset/setup.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/atomset creating build/lib.linux-armv7l-3.5/AdaptivePELE/utilities copying AdaptivePELE/utilities/clusteringUtilities.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/utilities copying AdaptivePELE/utilities/utilities.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/utilities copying AdaptivePELE/utilities/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/utilities creating build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testClustering.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testAdaptiveSampling.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testAtomset.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testSpawning.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testThresholdcalculator.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests copying AdaptivePELE/tests/testDensityCalculator.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/tests creating build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/findfirstbindingevent.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/makePNGs.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/plotRMSF.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/addRejectedSteps.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/pathwayRMSD.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/splitTrajectory.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/writeClusteringStructures.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/convertTrajectory.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/plotAdaptive.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/plot3DNetwork.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/analyseClustering.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/plotSpawningClusters.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/numberOfClusters.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/analyse.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/correctRMSD.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/writeNetworkFiles.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/histCM.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/networkCM.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis copying AdaptivePELE/analysis/compareClustering.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/analysis creating build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/computeDGGrid.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/estimate.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/estimateDG.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/extractCoords.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/extendTrajectories.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/computeDeltaG.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies copying AdaptivePELE/freeEnergies/cluster.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies creating build/lib.linux-armv7l-3.5/AdaptivePELE/clustering copying AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/clustering copying AdaptivePELE/clustering/clusteringTypes.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/clustering copying AdaptivePELE/clustering/clustering.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/clustering copying AdaptivePELE/clustering/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/clustering copying AdaptivePELE/clustering/thresholdcalculator.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/clustering creating build/lib.linux-armv7l-3.5/AdaptivePELE/spawning copying AdaptivePELE/spawning/densitycalculatortypes.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/spawning copying AdaptivePELE/spawning/spawning.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/spawning copying AdaptivePELE/spawning/spawningTypes.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/spawning copying AdaptivePELE/spawning/densitycalculator.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/spawning copying AdaptivePELE/spawning/__init__.py -> build/lib.linux-armv7l-3.5/AdaptivePELE/spawning running build_ext building 'AdaptivePELE.atomset.atomset' extension creating build/temp.linux-armv7l-3.5 creating build/temp.linux-armv7l-3.5/AdaptivePELE creating build/temp.linux-armv7l-3.5/AdaptivePELE/atomset arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include -I/usr/include/python3.5m -c AdaptivePELE/atomset/atomset.c -o build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/atomset.o In file included from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarraytypes.h:1821:0, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/arrayobject.h:4, from AdaptivePELE/atomset/atomset.c:502: /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/atomset.o -o build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/atomset.cpython-35m-arm-linux-gnueabihf.so building 'AdaptivePELE.atomset.SymmetryContactMapEvaluator' extension arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include -I/usr/include/python3.5m -c AdaptivePELE/atomset/SymmetryContactMapEvaluator.c -o build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o In file included from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarraytypes.h:1821:0, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/arrayobject.h:4, from AdaptivePELE/atomset/SymmetryContactMapEvaluator.c:502: /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o -o build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-35m-arm-linux-gnueabihf.so building 'AdaptivePELE.atomset.RMSDCalculator' extension arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include -I/usr/include/python3.5m -c AdaptivePELE/atomset/RMSDCalculator.c -o build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/RMSDCalculator.o In file included from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarraytypes.h:1821:0, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/arrayobject.h:4, from AdaptivePELE/atomset/RMSDCalculator.c:502: /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/AdaptivePELE/atomset/RMSDCalculator.o -o build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/RMSDCalculator.cpython-35m-arm-linux-gnueabihf.so building 'AdaptivePELE.freeEnergies.utils' extension creating build/temp.linux-armv7l-3.5/AdaptivePELE/freeEnergies arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/freeEnergies -I/home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include -I/usr/include/python3.5m -c AdaptivePELE/freeEnergies/utils.c -o build/temp.linux-armv7l-3.5/AdaptivePELE/freeEnergies/utils.o In file included from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarraytypes.h:1821:0, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/arrayobject.h:4, from AdaptivePELE/freeEnergies/utils.c:503: /home/piwheels/.local/lib/python3.5/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-RUbMX3/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/AdaptivePELE/freeEnergies/utils.o -o build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/utils.cpython-35m-arm-linux-gnueabihf.so installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/AdaptivePELE creating build/bdist.linux-armv7l/wheel/AdaptivePELE/validator copying build/lib.linux-armv7l-3.5/AdaptivePELE/validator/validatorBlockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator copying build/lib.linux-armv7l-3.5/AdaptivePELE/validator/controlFileValidator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator copying build/lib.linux-armv7l-3.5/AdaptivePELE/validator/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator copying build/lib.linux-armv7l-3.5/AdaptivePELE/adaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE copying build/lib.linux-armv7l-3.5/AdaptivePELE/runAllTests.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE copying build/lib.linux-armv7l-3.5/AdaptivePELE/makeRelease.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE creating build/bdist.linux-armv7l/wheel/AdaptivePELE/constants copying build/lib.linux-armv7l-3.5/AdaptivePELE/constants/symmetries.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants copying build/lib.linux-armv7l-3.5/AdaptivePELE/constants/constants.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants copying build/lib.linux-armv7l-3.5/AdaptivePELE/constants/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants copying build/lib.linux-armv7l-3.5/AdaptivePELE/constants/blockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants creating build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation copying build/lib.linux-armv7l-3.5/AdaptivePELE/simulation/simulationTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation copying build/lib.linux-armv7l-3.5/AdaptivePELE/simulation/simulationrunner.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation copying build/lib.linux-armv7l-3.5/AdaptivePELE/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation creating build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset copying build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset copying build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/RMSDCalculator.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset copying build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset copying build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/setup.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset copying build/lib.linux-armv7l-3.5/AdaptivePELE/atomset/atomset.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset creating build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities copying build/lib.linux-armv7l-3.5/AdaptivePELE/utilities/clusteringUtilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities copying build/lib.linux-armv7l-3.5/AdaptivePELE/utilities/utilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities copying build/lib.linux-armv7l-3.5/AdaptivePELE/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities copying build/lib.linux-armv7l-3.5/AdaptivePELE/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE creating build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testAdaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testAtomset.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testSpawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testThresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/tests/testDensityCalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests copying build/lib.linux-armv7l-3.5/AdaptivePELE/automateRoundsAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE creating build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/findfirstbindingevent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/makePNGs.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/plotRMSF.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/addRejectedSteps.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/pathwayRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/splitTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/writeClusteringStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/convertTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/plotAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/plot3DNetwork.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/analyseClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/plotSpawningClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/numberOfClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/analyse.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/correctRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/writeNetworkFiles.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/histCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/networkCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis copying build/lib.linux-armv7l-3.5/AdaptivePELE/analysis/compareClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis creating build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/computeDGGrid.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/utils.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/estimate.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/estimateDG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/extractCoords.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/extendTrajectories.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/computeDeltaG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies copying build/lib.linux-armv7l-3.5/AdaptivePELE/freeEnergies/cluster.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies creating build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering copying build/lib.linux-armv7l-3.5/AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering copying build/lib.linux-armv7l-3.5/AdaptivePELE/clustering/clusteringTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering copying build/lib.linux-armv7l-3.5/AdaptivePELE/clustering/clustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering copying build/lib.linux-armv7l-3.5/AdaptivePELE/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering copying build/lib.linux-armv7l-3.5/AdaptivePELE/clustering/thresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering creating build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning copying build/lib.linux-armv7l-3.5/AdaptivePELE/spawning/densitycalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning copying build/lib.linux-armv7l-3.5/AdaptivePELE/spawning/spawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning copying build/lib.linux-armv7l-3.5/AdaptivePELE/spawning/spawningTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning copying build/lib.linux-armv7l-3.5/AdaptivePELE/spawning/densitycalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning copying build/lib.linux-armv7l-3.5/AdaptivePELE/spawning/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning running install_egg_info running egg_info writing AdaptivePELE.egg-info/PKG-INFO writing requirements to AdaptivePELE.egg-info/requires.txt writing top-level names to AdaptivePELE.egg-info/top_level.txt writing dependency_links to AdaptivePELE.egg-info/dependency_links.txt reading manifest file 'AdaptivePELE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'AdaptivePELE.egg-info/SOURCES.txt' Copying AdaptivePELE.egg-info to build/bdist.linux-armv7l/wheel/AdaptivePELE-1.5.1-py3.5.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/AdaptivePELE-1.5.1.dist-info/WHEEL Running setup.py bdist_wheel for AdaptivePELE: finished with status 'done' Stored in directory: /tmp/tmp_nrfj546 Successfully built AdaptivePELE Cleaning up... Removing source in /tmp/pip-wheel-jsri480d/AdaptivePELE Removed build tracker '/tmp/pip-req-tracker-axsgww1c'