Created temporary directory: /tmp/pip-ephem-wheel-cache-qrdo5dg1 Created temporary directory: /tmp/pip-req-tracker-_mmznbes Created requirements tracker '/tmp/pip-req-tracker-_mmznbes' Created temporary directory: /tmp/pip-wheel-p2pjbxvd Collecting scipion-em-relion==1.0.1 1 location(s) to search for versions of scipion-em-relion: * https://pypi.org/simple/scipion-em-relion/ Getting page https://pypi.org/simple/scipion-em-relion/ Analyzing links from page https://pypi.org/simple/scipion-em-relion/ Found link https://files.pythonhosted.org/packages/05/a2/d5f1ffa8537f36f40b34263047919ae34baccbe64147bc68cc6c3f8777d9/scipion-em-relion-1.0.0.tar.gz#sha256=b12f8f634114a7e3cb0b33d7f6204bc47b8b5bb3815d3855feedbada752368fb (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.0 Found link https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.1 Using version 1.0.1 (newest of versions: 1.0.1) Created temporary directory: /tmp/pip-unpack-u40p37_2 Downloading https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz (140kB) Downloading from URL https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 (from https://pypi.org/simple/scipion-em-relion/) Added scipion-em-relion==1.0.1 from https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 to build tracker '/tmp/pip-req-tracker-_mmznbes' Running setup.py (path:/tmp/pip-wheel-p2pjbxvd/scipion-em-relion/setup.py) egg_info for package scipion-em-relion Running command python setup.py egg_info running egg_info creating pip-egg-info/scipion_em_relion.egg-info writing pip-egg-info/scipion_em_relion.egg-info/PKG-INFO writing dependency_links to pip-egg-info/scipion_em_relion.egg-info/dependency_links.txt writing top-level names to pip-egg-info/scipion_em_relion.egg-info/top_level.txt writing manifest file 'pip-egg-info/scipion_em_relion.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/scipion_em_relion.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pip-egg-info/scipion_em_relion.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-p2pjbxvd/scipion-em-relion has version 1.0.1, which satisfies requirement scipion-em-relion==1.0.1 from https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 Removed scipion-em-relion==1.0.1 from https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 from build tracker '/tmp/pip-req-tracker-_mmznbes' Building wheels for collected packages: scipion-em-relion Created temporary directory: /tmp/pip-wheel-vt9ybtk0 Running setup.py bdist_wheel for scipion-em-relion: started Destination directory: /tmp/pip-wheel-vt9ybtk0 Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-p2pjbxvd/scipion-em-relion/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-vt9ybtk0 running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/relion copying relion/bibtex.py -> build/lib/relion copying relion/constants.py -> build/lib/relion copying relion/viewers.py -> build/lib/relion copying relion/__init__.py -> build/lib/relion copying relion/wizards.py -> build/lib/relion creating build/lib/relion/convert copying relion/convert/dataimport.py -> build/lib/relion/convert copying relion/convert/convert.py -> build/lib/relion/convert copying relion/convert/__init__.py -> build/lib/relion/convert creating build/lib/relion/tests copying relion/tests/test_protocols_relion.py -> build/lib/relion/tests copying relion/tests/test_convert_relion.py -> build/lib/relion/tests copying relion/tests/__init__.py -> build/lib/relion/tests copying relion/tests/test_workflow_relion.py -> build/lib/relion/tests creating build/lib/relion/protocols copying relion/protocols/protocol_autopick_v2.py -> build/lib/relion/protocols copying relion/protocols/protocol_sort.py -> build/lib/relion/protocols copying relion/protocols/protocol_extract_particles_movies.py -> build/lib/relion/protocols copying relion/protocols/protocol_extract_particles.py -> build/lib/relion/protocols copying relion/protocols/protocol_reconstruct.py -> build/lib/relion/protocols copying relion/protocols/protocol_export_ctf.py -> build/lib/relion/protocols copying relion/protocols/protocol_expand_symmetry.py -> build/lib/relion/protocols copying relion/protocols/protocol_center_averages.py -> build/lib/relion/protocols copying relion/protocols/protocol_base.py -> build/lib/relion/protocols copying relion/protocols/protocol_postprocess.py -> build/lib/relion/protocols copying relion/protocols/protocol_export_particles.py -> build/lib/relion/protocols copying relion/protocols/protocol_initialmodel.py -> build/lib/relion/protocols copying relion/protocols/protocol_subtract.py -> build/lib/relion/protocols copying relion/protocols/protocol_classify2d.py -> build/lib/relion/protocols copying relion/protocols/protocol_classify3d.py -> build/lib/relion/protocols copying relion/protocols/__init__.py -> build/lib/relion/protocols copying relion/protocols/protocol_polish.py -> build/lib/relion/protocols copying relion/protocols/protocol_preprocess.py -> build/lib/relion/protocols copying relion/protocols/protocol_refine3d.py -> build/lib/relion/protocols copying relion/protocols/protocol_localres.py -> build/lib/relion/protocols copying relion/protocols/protocol_create_mask3d.py -> build/lib/relion/protocols copying relion/relion_logo.png -> build/lib/relion installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/relion copying build/lib/relion/bibtex.py -> build/bdist.linux-armv7l/wheel/relion creating build/bdist.linux-armv7l/wheel/relion/convert copying build/lib/relion/convert/dataimport.py -> build/bdist.linux-armv7l/wheel/relion/convert copying build/lib/relion/convert/convert.py -> build/bdist.linux-armv7l/wheel/relion/convert copying build/lib/relion/convert/__init__.py -> build/bdist.linux-armv7l/wheel/relion/convert copying build/lib/relion/constants.py -> build/bdist.linux-armv7l/wheel/relion creating build/bdist.linux-armv7l/wheel/relion/tests copying build/lib/relion/tests/test_protocols_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests copying build/lib/relion/tests/test_convert_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests copying build/lib/relion/tests/__init__.py -> build/bdist.linux-armv7l/wheel/relion/tests copying build/lib/relion/tests/test_workflow_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests copying build/lib/relion/viewers.py -> build/bdist.linux-armv7l/wheel/relion copying build/lib/relion/__init__.py -> build/bdist.linux-armv7l/wheel/relion creating build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_autopick_v2.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_sort.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_extract_particles_movies.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_extract_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_reconstruct.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_export_ctf.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_expand_symmetry.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_center_averages.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_base.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_postprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_export_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_initialmodel.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_subtract.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_classify2d.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_classify3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_polish.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_preprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_refine3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_localres.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/protocols/protocol_create_mask3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols copying build/lib/relion/relion_logo.png -> build/bdist.linux-armv7l/wheel/relion copying build/lib/relion/wizards.py -> build/bdist.linux-armv7l/wheel/relion running install_egg_info running egg_info writing scipion_em_relion.egg-info/PKG-INFO writing dependency_links to scipion_em_relion.egg-info/dependency_links.txt writing top-level names to scipion_em_relion.egg-info/top_level.txt reading manifest file 'scipion_em_relion.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'scipion_em_relion.egg-info/SOURCES.txt' Copying scipion_em_relion.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_relion-1.0.1-py3.4.egg-info running install_scripts adding license file "LICENSE" (matched pattern "LICEN[CS]E*") creating build/bdist.linux-armv7l/wheel/scipion_em_relion-1.0.1.dist-info/WHEEL creating '/tmp/pip-wheel-vt9ybtk0/scipion_em_relion-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'relion/__init__.py' adding 'relion/bibtex.py' adding 'relion/constants.py' adding 'relion/relion_logo.png' adding 'relion/viewers.py' adding 'relion/wizards.py' adding 'relion/convert/__init__.py' adding 'relion/convert/convert.py' adding 'relion/convert/dataimport.py' adding 'relion/protocols/__init__.py' adding 'relion/protocols/protocol_autopick_v2.py' adding 'relion/protocols/protocol_base.py' adding 'relion/protocols/protocol_center_averages.py' adding 'relion/protocols/protocol_classify2d.py' adding 'relion/protocols/protocol_classify3d.py' adding 'relion/protocols/protocol_create_mask3d.py' adding 'relion/protocols/protocol_expand_symmetry.py' adding 'relion/protocols/protocol_export_ctf.py' adding 'relion/protocols/protocol_export_particles.py' adding 'relion/protocols/protocol_extract_particles.py' adding 'relion/protocols/protocol_extract_particles_movies.py' adding 'relion/protocols/protocol_initialmodel.py' adding 'relion/protocols/protocol_localres.py' adding 'relion/protocols/protocol_polish.py' adding 'relion/protocols/protocol_postprocess.py' adding 'relion/protocols/protocol_preprocess.py' adding 'relion/protocols/protocol_reconstruct.py' adding 'relion/protocols/protocol_refine3d.py' adding 'relion/protocols/protocol_sort.py' adding 'relion/protocols/protocol_subtract.py' adding 'relion/tests/__init__.py' adding 'relion/tests/test_convert_relion.py' adding 'relion/tests/test_protocols_relion.py' adding 'relion/tests/test_workflow_relion.py' adding 'scipion_em_relion-1.0.1.dist-info/LICENSE' adding 'scipion_em_relion-1.0.1.dist-info/METADATA' adding 'scipion_em_relion-1.0.1.dist-info/WHEEL' adding 'scipion_em_relion-1.0.1.dist-info/top_level.txt' adding 'scipion_em_relion-1.0.1.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for scipion-em-relion: finished with status 'done' Stored in directory: /tmp/tmpidmonfxf Successfully built scipion-em-relion Cleaning up... Removing source in /tmp/pip-wheel-p2pjbxvd/scipion-em-relion Removed build tracker '/tmp/pip-req-tracker-_mmznbes'