Created temporary directory: /tmp/pip-ephem-wheel-cache-iz_pxrxh Created temporary directory: /tmp/pip-req-tracker-m6a470g1 Created requirements tracker '/tmp/pip-req-tracker-m6a470g1' Created temporary directory: /tmp/pip-wheel-d03l3mf4 Collecting pomoxis==0.2.2 1 location(s) to search for versions of pomoxis: * https://pypi.org/simple/pomoxis/ Getting page https://pypi.org/simple/pomoxis/ Analyzing links from page https://pypi.org/simple/pomoxis/ Found link https://files.pythonhosted.org/packages/c0/59/a56134534e8982b057c383eb347cf395305c28c3fcd47e42ca3866401212/pomoxis-0.2.2a1.tar.gz#sha256=62f5121020ce00f056714240d50d580d0c23a64d502a80ea529d431655367e88 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a1 Found link https://files.pythonhosted.org/packages/7f/90/ed673752a756a3477dcc242f938c46aa7fabd7e9a061438a8606c3a99e6e/pomoxis-0.2.2a2.tar.gz#sha256=cfed0307424929a9bb1e44f6acd2e1d8b5741532581ae38ce510d565979247c6 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a2 Found link https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2 Using version 0.2.2 (newest of versions: 0.2.2) Created temporary directory: /tmp/pip-unpack-6r6fau2k Downloading https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz (89kB) Downloading from URL https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) Added pomoxis==0.2.2 from https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 to build tracker '/tmp/pip-req-tracker-m6a470g1' Running setup.py (path:/tmp/pip-wheel-d03l3mf4/pomoxis/setup.py) egg_info for package pomoxis Running command python setup.py egg_info running egg_info creating pip-egg-info/pomoxis.egg-info writing dependency_links to pip-egg-info/pomoxis.egg-info/dependency_links.txt writing top-level names to pip-egg-info/pomoxis.egg-info/top_level.txt writing pip-egg-info/pomoxis.egg-info/PKG-INFO writing entry points to pip-egg-info/pomoxis.egg-info/entry_points.txt writing requirements to pip-egg-info/pomoxis.egg-info/requires.txt writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'build' no previously-included directories found matching 'docs' writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-d03l3mf4/pomoxis has version 0.2.2, which satisfies requirement pomoxis==0.2.2 from https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 Removed pomoxis==0.2.2 from https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 from build tracker '/tmp/pip-req-tracker-m6a470g1' Building wheels for collected packages: pomoxis Created temporary directory: /tmp/pip-wheel-frg0y7oq Running setup.py bdist_wheel for pomoxis: started Destination directory: /tmp/pip-wheel-frg0y7oq Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-d03l3mf4/pomoxis/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-frg0y7oq running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pomoxis copying pomoxis/watcher.py -> build/lib/pomoxis copying pomoxis/__init__.py -> build/lib/pomoxis creating build/lib/pomoxis/align copying pomoxis/align/common.py -> build/lib/pomoxis/align copying pomoxis/align/py2client.py -> build/lib/pomoxis/align copying pomoxis/align/minimap.py -> build/lib/pomoxis/align copying pomoxis/align/__init__.py -> build/lib/pomoxis/align creating build/lib/pomoxis/common copying pomoxis/common/bio.py -> build/lib/pomoxis/common copying pomoxis/common/catalogue_errors.py -> build/lib/pomoxis/common copying pomoxis/common/stats_from_bam.py -> build/lib/pomoxis/common copying pomoxis/common/ref_seqs_from_bam.py -> build/lib/pomoxis/common copying pomoxis/common/common_errors_from_bam.py -> build/lib/pomoxis/common copying pomoxis/common/trim_alignments.py -> build/lib/pomoxis/common copying pomoxis/common/qscores_from_summary.py -> build/lib/pomoxis/common copying pomoxis/common/coverage_from_bam.py -> build/lib/pomoxis/common copying pomoxis/common/util.py -> build/lib/pomoxis/common copying pomoxis/common/summary_from_stats.py -> build/lib/pomoxis/common copying pomoxis/common/subsample_bam.py -> build/lib/pomoxis/common copying pomoxis/common/simulate_calls.py -> build/lib/pomoxis/common copying pomoxis/common/__init__.py -> build/lib/pomoxis/common creating build/lib/pomoxis/provider copying pomoxis/provider/replayfast5.py -> build/lib/pomoxis/provider copying pomoxis/provider/__init__.py -> build/lib/pomoxis/provider running build_scripts creating build/scripts-3.5 copying scripts/assess_assembly -> build/scripts-3.5 copying scripts/intersect_assembly_errors -> build/scripts-3.5 copying scripts/mini_align -> build/scripts-3.5 copying scripts/mini_assemble -> build/scripts-3.5 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/pomoxis creating build/bdist.linux-armv7l/wheel/pomoxis/align copying build/lib/pomoxis/align/common.py -> build/bdist.linux-armv7l/wheel/pomoxis/align copying build/lib/pomoxis/align/py2client.py -> build/bdist.linux-armv7l/wheel/pomoxis/align copying build/lib/pomoxis/align/minimap.py -> build/bdist.linux-armv7l/wheel/pomoxis/align copying build/lib/pomoxis/align/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/align copying build/lib/pomoxis/watcher.py -> build/bdist.linux-armv7l/wheel/pomoxis creating build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/bio.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/catalogue_errors.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/stats_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/ref_seqs_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/common_errors_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/trim_alignments.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/qscores_from_summary.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/coverage_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/util.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/summary_from_stats.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/subsample_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/simulate_calls.py -> build/bdist.linux-armv7l/wheel/pomoxis/common copying build/lib/pomoxis/common/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/common creating build/bdist.linux-armv7l/wheel/pomoxis/provider copying build/lib/pomoxis/provider/replayfast5.py -> build/bdist.linux-armv7l/wheel/pomoxis/provider copying build/lib/pomoxis/provider/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/provider copying build/lib/pomoxis/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis running install_egg_info running egg_info writing pomoxis.egg-info/PKG-INFO writing requirements to pomoxis.egg-info/requires.txt writing dependency_links to pomoxis.egg-info/dependency_links.txt writing entry points to pomoxis.egg-info/entry_points.txt writing top-level names to pomoxis.egg-info/top_level.txt reading manifest file 'pomoxis.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'build' no previously-included directories found matching 'docs' writing manifest file 'pomoxis.egg-info/SOURCES.txt' Copying pomoxis.egg-info to build/bdist.linux-armv7l/wheel/pomoxis-0.2.2-py3.5.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts copying build/scripts-3.5/intersect_assembly_errors -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts copying build/scripts-3.5/mini_align -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts copying build/scripts-3.5/assess_assembly -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts copying build/scripts-3.5/mini_assemble -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts/intersect_assembly_errors to 755 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts/mini_align to 755 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts/assess_assembly to 755 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.data/scripts/mini_assemble to 755 adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*") creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.2.dist-info/WHEEL creating '/tmp/pip-wheel-frg0y7oq/pomoxis-0.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'pomoxis/__init__.py' adding 'pomoxis/watcher.py' adding 'pomoxis/align/__init__.py' adding 'pomoxis/align/common.py' adding 'pomoxis/align/minimap.py' adding 'pomoxis/align/py2client.py' adding 'pomoxis/common/__init__.py' adding 'pomoxis/common/bio.py' adding 'pomoxis/common/catalogue_errors.py' adding 'pomoxis/common/common_errors_from_bam.py' adding 'pomoxis/common/coverage_from_bam.py' adding 'pomoxis/common/qscores_from_summary.py' adding 'pomoxis/common/ref_seqs_from_bam.py' adding 'pomoxis/common/simulate_calls.py' adding 'pomoxis/common/stats_from_bam.py' adding 'pomoxis/common/subsample_bam.py' adding 'pomoxis/common/summary_from_stats.py' adding 'pomoxis/common/trim_alignments.py' adding 'pomoxis/common/util.py' adding 'pomoxis/provider/__init__.py' adding 'pomoxis/provider/replayfast5.py' adding 'pomoxis-0.2.2.data/scripts/assess_assembly' adding 'pomoxis-0.2.2.data/scripts/intersect_assembly_errors' adding 'pomoxis-0.2.2.data/scripts/mini_align' adding 'pomoxis-0.2.2.data/scripts/mini_assemble' adding 'pomoxis-0.2.2.dist-info/LICENSE.md' adding 'pomoxis-0.2.2.dist-info/METADATA' adding 'pomoxis-0.2.2.dist-info/WHEEL' adding 'pomoxis-0.2.2.dist-info/entry_points.txt' adding 'pomoxis-0.2.2.dist-info/top_level.txt' adding 'pomoxis-0.2.2.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for pomoxis: finished with status 'done' Stored in directory: /tmp/tmp8tmfug7c Successfully built pomoxis Cleaning up... Removing source in /tmp/pip-wheel-d03l3mf4/pomoxis Removed build tracker '/tmp/pip-req-tracker-m6a470g1'