2019-06-27T02:13:04 Created temporary directory: /tmp/pip-ephem-wheel-cache-ta6dfgg8 2019-06-27T02:13:04 Created temporary directory: /tmp/pip-req-tracker-8wqh7y65 2019-06-27T02:13:04 Created requirements tracker '/tmp/pip-req-tracker-8wqh7y65' 2019-06-27T02:13:04 Created temporary directory: /tmp/pip-wheel-mdk2gju4 2019-06-27T02:13:04 Collecting ssbio==0.9.9.8.post1 2019-06-27T02:13:04 1 location(s) to search for versions of ssbio: 2019-06-27T02:13:04 * https://pypi.org/simple/ssbio/ 2019-06-27T02:13:04 Getting page https://pypi.org/simple/ssbio/ 2019-06-27T02:13:04 Analyzing links from page https://pypi.org/simple/ssbio/ 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/19/84/95d3a57225131be3264c54c59ed535d4e3835096a2b02a208c23b27bb908/ssbio-0.9.0.tar.gz#sha256=cc678d0d4f2eb77477d7bc5dce970da4d583257df2d9ce3823b25c63b9b00c03 (from https://pypi.org/simple/ssbio/), version: 0.9.0 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/39/75/65a2dd3565e032480d6d4f41279113df1ea77db6f68d5d49e0e39337fb58/ssbio-0.9.1.tar.gz#sha256=6eb6a534e237e1fa48a38f8ca4c519908579e2564153bc07c8e470599a8f1fa6 (from https://pypi.org/simple/ssbio/), version: 0.9.1 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/2a/e9/0442b708594aa9805825eeb309403e02dd000b01c21fdb5e6443c34f7c41/ssbio-0.9.2.tar.gz#sha256=8568ea1ce036cf53e4e002ae55e93f0e92d090b2276e65e2afcb99377722010a (from https://pypi.org/simple/ssbio/), version: 0.9.2 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/1c/96/681aa00b0bd16d6e144a2361a10cf7441fb9d2f14c5196b9317ac379e714/ssbio-0.9.3.tar.gz#sha256=de129da7ce324059de1629d7ffb8df0552dd9a7427555756d10e80ddc1ca1812 (from https://pypi.org/simple/ssbio/), version: 0.9.3 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/90/3a/50920cd9fe8b6c84c5957fe9e6bfac53fe9019b4764a2937873be96fee15/ssbio-0.9.4.tar.gz#sha256=963e0cc15904942a0ac5188ddad2a45ff802495d41a4efd810d5b187bbf7e30c (from https://pypi.org/simple/ssbio/), version: 0.9.4 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/46/20/da2d087f681025311ef22b5ca86da051ffff22f3d983b9b7b236ad8b6205/ssbio-0.9.5.tar.gz#sha256=b4c2f8488920dc3881e0a4bb27e975b90fbe5761f101261a5ce995ae5641e566 (from https://pypi.org/simple/ssbio/), version: 0.9.5 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/f0/7e/1e66ffeec58a01a31a12b1c09a3ac139c5c0121d8747b48da7cfb3eafd7e/ssbio-0.9.6.tar.gz#sha256=eec1ce6bcb5d3e2ca17a8c108dbfd71eb208a3bd88f8536b15410f6fb405135e (from https://pypi.org/simple/ssbio/), version: 0.9.6 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/b8/c5/334ecd5f7ce16371f5c0f65c0b9de87b77c1ad779e94da6e6ace6eb7e89d/ssbio-0.9.7.tar.gz#sha256=5a83136de36977df732eea07093de5063ff1990c949e62e5a6a0e4542f752d05 (from https://pypi.org/simple/ssbio/), version: 0.9.7 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/d2/f8/8b769a6d8f83f2c2e753efd9e75d46698e598471acadbe131ea0145386ab/ssbio-0.9.8.tar.gz#sha256=7fdf836525302066dc85b78a10fc33139e6e26f61360b01f177d40b4581a87ab (from https://pypi.org/simple/ssbio/), version: 0.9.8 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/97/74/79082930fdc8eaa8fc0650008681a512fcdfc38742aa0549c7cb80e64614/ssbio-0.9.8.1.tar.gz#sha256=bd485c7fa0fe9ac65be5f4a3663037541f9857d6ef34e82f964ea9c4032c7485 (from https://pypi.org/simple/ssbio/), version: 0.9.8.1 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/c9/d1/f4d5d5705d768da479539d8761486d7f5ccac1eeb135292cfe736da893e8/ssbio-0.9.9.tar.gz#sha256=d50ffc12df3a58e4ddb15ffebde6a569c92b1b6f0ff3c2ff5e59b6dd27d7dd9e (from https://pypi.org/simple/ssbio/), version: 0.9.9 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/94/dc/124b64ce3686eb5f0189716fcbcaa83e4ad8a0a4c5a37b144260413d381d/ssbio-0.9.9.1.tar.gz#sha256=d3034e4331c670b55d75cabec679c59b31e91f1892f4228f634311677806447b (from https://pypi.org/simple/ssbio/), version: 0.9.9.1 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/82/da/7f94d130161b3151f8b443c92246def723dd410c8c3ce0d97c0c71b7fa08/ssbio-0.9.9.2.tar.gz#sha256=efa29a5556d9de85328f8744e30024f4553728b5ae7cd6968afb018e73f53d4a (from https://pypi.org/simple/ssbio/), version: 0.9.9.2 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/99/46/83755de5c913d14385aba12e47c105925c5b86ec83e06a663694a64e70ac/ssbio-0.9.9.3.tar.gz#sha256=60831ca413eaefdf3feafd48c8fb01f364fc2589e94692cb917b94031639ac43 (from https://pypi.org/simple/ssbio/), version: 0.9.9.3 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/fd/f1/34fe1bd15df66c5f11673cea79473cf1e72bd053f1784573411f5f17c15a/ssbio-0.9.9.4.tar.gz#sha256=2245461c98f6690ff1032400dd8cff2579b2e326b7a6fc8e41e16de560423d80 (from https://pypi.org/simple/ssbio/), version: 0.9.9.4 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/e2/34/7baa850dcf73a6f7b23b53996686e350a37ca87e2748408c940da2a8643f/ssbio-0.9.9.5.tar.gz#sha256=043dcf740f46ca1ed3486e84f9ee8f5fa14b6bc424af3b03e1d8c7ea5ef7bc4a (from https://pypi.org/simple/ssbio/), version: 0.9.9.5 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/83/c7/d4b5e853c65e6cc5ef46d450525d997ee521e84ea41023c8487bef5b1f39/ssbio-0.9.9.6.tar.gz#sha256=19cf546cdbf8363f53f54dec0469fcab40f89af5d9f848a04d9c2d3cfe3516fc (from https://pypi.org/simple/ssbio/), version: 0.9.9.6 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/30/90/b5ba8639e2c0e6ab06ad9f45965307c1b653b0129cde73b3486d24f1f446/ssbio-0.9.9.8a0.tar.gz#sha256=2677ade7009adede156820d13297d3797762839643cb2742e662da216e62cd47 (from https://pypi.org/simple/ssbio/), version: 0.9.9.8a0 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/8d/31/6ad40347358b16846e2c91c67317c960954aa156ddf12bfe9937f3893949/ssbio-0.9.9.8.tar.gz#sha256=8542a9268de880bc1818a34b7368e1a5e67ee5ccfb2dc4282e8f5f24bcfc3a8c (from https://pypi.org/simple/ssbio/), version: 0.9.9.8 2019-06-27T02:13:05 Found link https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz#sha256=967e98bc75f1052506f9b7d2d3638bfdf3b3a278380d80761a2d78c0a82d4e3a (from https://pypi.org/simple/ssbio/), version: 0.9.9.8.post1 2019-06-27T02:13:05 Using version 0.9.9.8.post1 (newest of versions: 0.9.9.8.post1) 2019-06-27T02:13:05 Created temporary directory: /tmp/pip-unpack-omicon3x 2019-06-27T02:13:05 Downloading https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz (222kB) 2019-06-27T02:13:05 Downloading from URL https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz#sha256=967e98bc75f1052506f9b7d2d3638bfdf3b3a278380d80761a2d78c0a82d4e3a (from https://pypi.org/simple/ssbio/) 2019-06-27T02:13:06 Added ssbio==0.9.9.8.post1 from https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz#sha256=967e98bc75f1052506f9b7d2d3638bfdf3b3a278380d80761a2d78c0a82d4e3a to build tracker '/tmp/pip-req-tracker-8wqh7y65' 2019-06-27T02:13:06 Running setup.py (path:/tmp/pip-wheel-mdk2gju4/ssbio/setup.py) egg_info for package ssbio 2019-06-27T02:13:06 Running command python setup.py egg_info 2019-06-27T02:13:08 running egg_info 2019-06-27T02:13:08 creating pip-egg-info/ssbio.egg-info 2019-06-27T02:13:08 writing top-level names to pip-egg-info/ssbio.egg-info/top_level.txt 2019-06-27T02:13:08 writing pip-egg-info/ssbio.egg-info/PKG-INFO 2019-06-27T02:13:08 writing requirements to pip-egg-info/ssbio.egg-info/requires.txt 2019-06-27T02:13:08 writing dependency_links to pip-egg-info/ssbio.egg-info/dependency_links.txt 2019-06-27T02:13:08 writing manifest file 'pip-egg-info/ssbio.egg-info/SOURCES.txt' 2019-06-27T02:13:08 reading manifest file 'pip-egg-info/ssbio.egg-info/SOURCES.txt' 2019-06-27T02:13:08 reading manifest template 'MANIFEST.in' 2019-06-27T02:13:08 warning: no files found matching 'README.md' 2019-06-27T02:13:08 writing manifest file 'pip-egg-info/ssbio.egg-info/SOURCES.txt' 2019-06-27T02:13:08 Source in /tmp/pip-wheel-mdk2gju4/ssbio has version 0.9.9.8.post1, which satisfies requirement ssbio==0.9.9.8.post1 from https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz#sha256=967e98bc75f1052506f9b7d2d3638bfdf3b3a278380d80761a2d78c0a82d4e3a 2019-06-27T02:13:08 Removed ssbio==0.9.9.8.post1 from https://files.pythonhosted.org/packages/ed/bb/bc7d3774c5de0f20856f148201f102d407b4d6b164ee74aa3a86f8aed89b/ssbio-0.9.9.8.post1.tar.gz#sha256=967e98bc75f1052506f9b7d2d3638bfdf3b3a278380d80761a2d78c0a82d4e3a from build tracker '/tmp/pip-req-tracker-8wqh7y65' 2019-06-27T02:13:08 Building wheels for collected packages: ssbio 2019-06-27T02:13:08 Created temporary directory: /tmp/pip-wheel-hmobrkn4 2019-06-27T02:13:08 Building wheel for ssbio (setup.py): started 2019-06-27T02:13:08 Destination directory: /tmp/pip-wheel-hmobrkn4 2019-06-27T02:13:08 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-mdk2gju4/ssbio/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hmobrkn4 2019-06-27T02:13:10 running bdist_wheel 2019-06-27T02:13:10 running build 2019-06-27T02:13:10 running build_py 2019-06-27T02:13:11 creating build 2019-06-27T02:13:11 creating build/lib 2019-06-27T02:13:11 creating build/lib/ssbio 2019-06-27T02:13:11 copying ssbio/__init__.py -> build/lib/ssbio 2019-06-27T02:13:11 copying ssbio/utils.py -> build/lib/ssbio 2019-06-27T02:13:11 creating build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/conftest.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_structure_utils_mutatepdb.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_structure_properties_fatcat.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_databases_uniprot.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_pipeline_atlas.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_sequence_properties_scratch.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_core_object.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_databases_pdb.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_seqprop.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_utils.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_structure_utils_cleanpdb.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_core_genepro.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_databases_kegg.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/__init__.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_sequence_utils_alignment.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_sequence_properties_thermostability.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_databases_bigg.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_structure_homology_itasserparse.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_protein_sequence_utils_fasta.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_pipeline_gempro.py -> build/lib/ssbio/test 2019-06-27T02:13:11 copying ssbio/test/test_core_protein.py -> build/lib/ssbio/test 2019-06-27T02:13:11 creating build/lib/ssbio/complex 2019-06-27T02:13:11 copying ssbio/complex/oligomer.py -> build/lib/ssbio/complex 2019-06-27T02:13:11 copying ssbio/complex/__init__.py -> build/lib/ssbio/complex 2019-06-27T02:13:11 copying ssbio/complex/bioassembly.py -> build/lib/ssbio/complex 2019-06-27T02:13:11 creating build/lib/ssbio/viz 2019-06-27T02:13:11 copying ssbio/viz/nglview.py -> build/lib/ssbio/viz 2019-06-27T02:13:11 copying ssbio/viz/__init__.py -> build/lib/ssbio/viz 2019-06-27T02:13:11 copying ssbio/viz/color.py -> build/lib/ssbio/viz 2019-06-27T02:13:11 creating build/lib/ssbio/biopython 2019-06-27T02:13:11 copying ssbio/biopython/bp_mmcif2dict.py -> build/lib/ssbio/biopython 2019-06-27T02:13:11 copying ssbio/biopython/bp_mmcifparser.py -> build/lib/ssbio/biopython 2019-06-27T02:13:11 copying ssbio/biopython/__init__.py -> build/lib/ssbio/biopython 2019-06-27T02:13:11 creating build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/pdbflex.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/pdb.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/uniprot.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/patric.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/pdb_seq.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/pisa.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/bigg.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/swissmodel.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/__init__.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/metalpdb.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/hmmer.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/ncbi.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 copying ssbio/databases/kegg.py -> build/lib/ssbio/databases 2019-06-27T02:13:11 creating build/lib/ssbio/pipeline 2019-06-27T02:13:11 copying ssbio/pipeline/atlas2.py -> build/lib/ssbio/pipeline 2019-06-27T02:13:11 copying ssbio/pipeline/atlas3.py -> build/lib/ssbio/pipeline 2019-06-27T02:13:11 copying ssbio/pipeline/atlas.py -> build/lib/ssbio/pipeline 2019-06-27T02:13:11 copying ssbio/pipeline/__init__.py -> build/lib/ssbio/pipeline 2019-06-27T02:13:11 copying ssbio/pipeline/gempro.py -> build/lib/ssbio/pipeline 2019-06-27T02:13:11 creating build/lib/ssbio/io 2019-06-27T02:13:11 copying ssbio/io/__init__.py -> build/lib/ssbio/io 2019-06-27T02:13:11 copying ssbio/io/validation.py -> build/lib/ssbio/io 2019-06-27T02:13:11 creating build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/modelpro.py -> build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/object.py -> build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/__init__.py -> build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/genepro.py -> build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/complex.py -> build/lib/ssbio/core 2019-06-27T02:13:11 copying ssbio/core/protein.py -> build/lib/ssbio/core 2019-06-27T02:13:11 creating build/lib/ssbio/protein 2019-06-27T02:13:11 copying ssbio/protein/__init__.py -> build/lib/ssbio/protein 2019-06-27T02:13:11 creating build/lib/ssbio/protein/structure 2019-06-27T02:13:11 copying ssbio/protein/structure/chainprop.py -> build/lib/ssbio/protein/structure 2019-06-27T02:13:11 copying ssbio/protein/structure/structprop.py -> build/lib/ssbio/protein/structure 2019-06-27T02:13:11 copying ssbio/protein/structure/__init__.py -> build/lib/ssbio/protein/structure 2019-06-27T02:13:11 creating build/lib/ssbio/protein/sequence 2019-06-27T02:13:11 copying ssbio/protein/sequence/seqprop.py -> build/lib/ssbio/protein/sequence 2019-06-27T02:13:11 copying ssbio/protein/sequence/__init__.py -> build/lib/ssbio/protein/sequence 2019-06-27T02:13:11 creating build/lib/ssbio/protein/structure/homology 2019-06-27T02:13:11 copying ssbio/protein/structure/homology/__init__.py -> build/lib/ssbio/protein/structure/homology 2019-06-27T02:13:11 creating build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/stride.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/opm.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/dssp.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/residues.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/fatcat.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/freesasa.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/msms.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/__init__.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 copying ssbio/protein/structure/properties/quality.py -> build/lib/ssbio/protein/structure/properties 2019-06-27T02:13:11 creating build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/tleap.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/dock.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/mutatepdb.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/structureio.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/__init__.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/foldx.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 copying ssbio/protein/structure/utils/cleanpdb.py -> build/lib/ssbio/protein/structure/utils 2019-06-27T02:13:11 creating build/lib/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:11 copying ssbio/protein/structure/homology/itasser/itasserprop.py -> build/lib/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:11 copying ssbio/protein/structure/homology/itasser/itasserprep.py -> build/lib/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:11 copying ssbio/protein/structure/homology/itasser/__init__.py -> build/lib/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:12 creating build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/residues.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/scratch.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/aggregation_propensity.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/thermostability.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/tmhmm.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/kinetic_folding_rate.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/__init__.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying ssbio/protein/sequence/properties/cctop.py -> build/lib/ssbio/protein/sequence/properties 2019-06-27T02:13:12 creating build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying ssbio/protein/sequence/utils/blast.py -> build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying ssbio/protein/sequence/utils/alignment.py -> build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying ssbio/protein/sequence/utils/__init__.py -> build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying ssbio/protein/sequence/utils/utils.py -> build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying ssbio/protein/sequence/utils/fasta.py -> build/lib/ssbio/protein/sequence/utils 2019-06-27T02:13:12 installing to build/bdist.linux-armv7l/wheel 2019-06-27T02:13:12 running install 2019-06-27T02:13:12 running install_lib 2019-06-27T02:13:12 creating build/bdist.linux-armv7l 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/conftest.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_structure_utils_mutatepdb.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_structure_properties_fatcat.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_databases_uniprot.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_pipeline_atlas.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_sequence_properties_scratch.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_core_object.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_databases_pdb.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_seqprop.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_utils.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_structure_utils_cleanpdb.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_core_genepro.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_databases_kegg.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_sequence_utils_alignment.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_sequence_properties_thermostability.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_databases_bigg.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_structure_homology_itasserparse.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_protein_sequence_utils_fasta.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_pipeline_gempro.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 copying build/lib/ssbio/test/test_core_protein.py -> build/bdist.linux-armv7l/wheel/ssbio/test 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/complex 2019-06-27T02:13:12 copying build/lib/ssbio/complex/oligomer.py -> build/bdist.linux-armv7l/wheel/ssbio/complex 2019-06-27T02:13:12 copying build/lib/ssbio/complex/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/complex 2019-06-27T02:13:12 copying build/lib/ssbio/complex/bioassembly.py -> build/bdist.linux-armv7l/wheel/ssbio/complex 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/viz 2019-06-27T02:13:12 copying build/lib/ssbio/viz/nglview.py -> build/bdist.linux-armv7l/wheel/ssbio/viz 2019-06-27T02:13:12 copying build/lib/ssbio/viz/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/viz 2019-06-27T02:13:12 copying build/lib/ssbio/viz/color.py -> build/bdist.linux-armv7l/wheel/ssbio/viz 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/biopython 2019-06-27T02:13:12 copying build/lib/ssbio/biopython/bp_mmcif2dict.py -> build/bdist.linux-armv7l/wheel/ssbio/biopython 2019-06-27T02:13:12 copying build/lib/ssbio/biopython/bp_mmcifparser.py -> build/bdist.linux-armv7l/wheel/ssbio/biopython 2019-06-27T02:13:12 copying build/lib/ssbio/biopython/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/biopython 2019-06-27T02:13:12 copying build/lib/ssbio/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/pdbflex.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/pdb.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/uniprot.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/patric.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/pdb_seq.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/pisa.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/bigg.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/swissmodel.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/metalpdb.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/hmmer.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/ncbi.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 copying build/lib/ssbio/databases/kegg.py -> build/bdist.linux-armv7l/wheel/ssbio/databases 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/pipeline/atlas2.py -> build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/pipeline/atlas3.py -> build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/pipeline/atlas.py -> build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/pipeline/gempro.py -> build/bdist.linux-armv7l/wheel/ssbio/pipeline 2019-06-27T02:13:12 copying build/lib/ssbio/utils.py -> build/bdist.linux-armv7l/wheel/ssbio 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/io 2019-06-27T02:13:12 copying build/lib/ssbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/io 2019-06-27T02:13:12 copying build/lib/ssbio/io/validation.py -> build/bdist.linux-armv7l/wheel/ssbio/io 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/modelpro.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/object.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/genepro.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/complex.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 copying build/lib/ssbio/core/protein.py -> build/bdist.linux-armv7l/wheel/ssbio/core 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/structure 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/homology/itasser/itasserprop.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/homology/itasser/itasserprep.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/homology/itasser/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology/itasser 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/homology/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/homology 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/chainprop.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/structprop.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/stride.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/opm.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/dssp.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/residues.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/fatcat.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/freesasa.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/msms.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/properties/quality.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/tleap.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/dock.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/mutatepdb.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/structureio.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/foldx.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/structure/utils/cleanpdb.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/structure/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/sequence 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/seqprop.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/residues.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/scratch.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/aggregation_propensity.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/thermostability.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/tmhmm.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/kinetic_folding_rate.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/properties/cctop.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/properties 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence 2019-06-27T02:13:12 creating build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/utils/blast.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/utils/alignment.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/utils/utils.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 copying build/lib/ssbio/protein/sequence/utils/fasta.py -> build/bdist.linux-armv7l/wheel/ssbio/protein/sequence/utils 2019-06-27T02:13:12 running install_egg_info 2019-06-27T02:13:12 running egg_info 2019-06-27T02:13:12 writing ssbio.egg-info/PKG-INFO 2019-06-27T02:13:12 writing dependency_links to ssbio.egg-info/dependency_links.txt 2019-06-27T02:13:12 writing requirements to ssbio.egg-info/requires.txt 2019-06-27T02:13:12 writing top-level names to ssbio.egg-info/top_level.txt 2019-06-27T02:13:13 reading manifest file 'ssbio.egg-info/SOURCES.txt' 2019-06-27T02:13:13 reading manifest template 'MANIFEST.in' 2019-06-27T02:13:13 warning: no files found matching 'README.md' 2019-06-27T02:13:13 writing manifest file 'ssbio.egg-info/SOURCES.txt' 2019-06-27T02:13:13 Copying ssbio.egg-info to build/bdist.linux-armv7l/wheel/ssbio-0.9.9.8.post1-py3.5.egg-info 2019-06-27T02:13:13 running install_scripts 2019-06-27T02:13:13 creating build/bdist.linux-armv7l/wheel/ssbio-0.9.9.8.post1.dist-info/WHEEL 2019-06-27T02:13:13 creating '/tmp/pip-wheel-hmobrkn4/ssbio-0.9.9.8.post1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-06-27T02:13:13 adding 'ssbio/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/utils.py' 2019-06-27T02:13:13 adding 'ssbio/biopython/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/biopython/bp_mmcif2dict.py' 2019-06-27T02:13:13 adding 'ssbio/biopython/bp_mmcifparser.py' 2019-06-27T02:13:13 adding 'ssbio/complex/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/complex/bioassembly.py' 2019-06-27T02:13:13 adding 'ssbio/complex/oligomer.py' 2019-06-27T02:13:13 adding 'ssbio/core/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/core/complex.py' 2019-06-27T02:13:13 adding 'ssbio/core/genepro.py' 2019-06-27T02:13:13 adding 'ssbio/core/modelpro.py' 2019-06-27T02:13:13 adding 'ssbio/core/object.py' 2019-06-27T02:13:13 adding 'ssbio/core/protein.py' 2019-06-27T02:13:13 adding 'ssbio/databases/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/databases/bigg.py' 2019-06-27T02:13:13 adding 'ssbio/databases/hmmer.py' 2019-06-27T02:13:13 adding 'ssbio/databases/kegg.py' 2019-06-27T02:13:13 adding 'ssbio/databases/metalpdb.py' 2019-06-27T02:13:13 adding 'ssbio/databases/ncbi.py' 2019-06-27T02:13:13 adding 'ssbio/databases/patric.py' 2019-06-27T02:13:13 adding 'ssbio/databases/pdb.py' 2019-06-27T02:13:13 adding 'ssbio/databases/pdb_seq.py' 2019-06-27T02:13:13 adding 'ssbio/databases/pdbflex.py' 2019-06-27T02:13:13 adding 'ssbio/databases/pisa.py' 2019-06-27T02:13:13 adding 'ssbio/databases/swissmodel.py' 2019-06-27T02:13:13 adding 'ssbio/databases/uniprot.py' 2019-06-27T02:13:13 adding 'ssbio/io/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/io/validation.py' 2019-06-27T02:13:13 adding 'ssbio/pipeline/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/pipeline/atlas.py' 2019-06-27T02:13:13 adding 'ssbio/pipeline/atlas2.py' 2019-06-27T02:13:13 adding 'ssbio/pipeline/atlas3.py' 2019-06-27T02:13:13 adding 'ssbio/pipeline/gempro.py' 2019-06-27T02:13:13 adding 'ssbio/protein/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/seqprop.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/aggregation_propensity.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/cctop.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/kinetic_folding_rate.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/residues.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/scratch.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/thermostability.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/properties/tmhmm.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/utils/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/utils/alignment.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/utils/blast.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/utils/fasta.py' 2019-06-27T02:13:13 adding 'ssbio/protein/sequence/utils/utils.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/chainprop.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/structprop.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/homology/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/homology/itasser/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/homology/itasser/itasserprep.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/homology/itasser/itasserprop.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/dssp.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/fatcat.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/freesasa.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/msms.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/opm.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/quality.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/residues.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/properties/stride.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/cleanpdb.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/dock.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/foldx.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/mutatepdb.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/structureio.py' 2019-06-27T02:13:13 adding 'ssbio/protein/structure/utils/tleap.py' 2019-06-27T02:13:13 adding 'ssbio/test/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/test/conftest.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_core_genepro.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_core_object.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_core_protein.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_databases_bigg.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_databases_kegg.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_databases_pdb.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_databases_uniprot.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_pipeline_atlas.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_pipeline_gempro.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_seqprop.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_sequence_properties_scratch.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_sequence_properties_thermostability.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_sequence_utils_alignment.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_sequence_utils_fasta.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_structure_homology_itasserparse.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_structure_properties_fatcat.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_structure_utils_cleanpdb.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_protein_structure_utils_mutatepdb.py' 2019-06-27T02:13:13 adding 'ssbio/test/test_utils.py' 2019-06-27T02:13:13 adding 'ssbio/viz/__init__.py' 2019-06-27T02:13:13 adding 'ssbio/viz/color.py' 2019-06-27T02:13:13 adding 'ssbio/viz/nglview.py' 2019-06-27T02:13:13 adding 'ssbio-0.9.9.8.post1.dist-info/METADATA' 2019-06-27T02:13:13 adding 'ssbio-0.9.9.8.post1.dist-info/WHEEL' 2019-06-27T02:13:13 adding 'ssbio-0.9.9.8.post1.dist-info/top_level.txt' 2019-06-27T02:13:13 adding 'ssbio-0.9.9.8.post1.dist-info/RECORD' 2019-06-27T02:13:13 removing build/bdist.linux-armv7l/wheel 2019-06-27T02:13:14 Building wheel for ssbio (setup.py): finished with status 'done' 2019-06-27T02:13:14 Stored in directory: /tmp/tmpmetglkv6 2019-06-27T02:13:14 Successfully built ssbio 2019-06-27T02:13:14 Cleaning up... 2019-06-27T02:13:14 Removing source in /tmp/pip-wheel-mdk2gju4/ssbio 2019-06-27T02:13:14 Removed build tracker '/tmp/pip-req-tracker-8wqh7y65'