2019-06-30T08:20:43 Created temporary directory: /tmp/pip-ephem-wheel-cache-2w252i16 2019-06-30T08:20:43 Created temporary directory: /tmp/pip-req-tracker-569t0y6j 2019-06-30T08:20:43 Created requirements tracker '/tmp/pip-req-tracker-569t0y6j' 2019-06-30T08:20:43 Created temporary directory: /tmp/pip-wheel-q_107cfz 2019-06-30T08:20:43 Collecting pyseqan==1.1.6 2019-06-30T08:20:43 1 location(s) to search for versions of pyseqan: 2019-06-30T08:20:43 * https://pypi.org/simple/pyseqan/ 2019-06-30T08:20:43 Getting page https://pypi.org/simple/pyseqan/ 2019-06-30T08:20:43 Analyzing links from page https://pypi.org/simple/pyseqan/ 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/ab/b8/fc98e00a5a60cbf42a357f524eb16c8c64466c029d43f8cdbc7135c99a6b/pyseqan-1.0.0.tar.gz#sha256=2bd274daa3e9df9075774b24bee3e7a7e3963ea553c30c76fd011113dd743380 (from https://pypi.org/simple/pyseqan/), version: 1.0.0 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/a2/50/60057a68ce00558dc3fdfa8fd5a9b1d518c2e30e6a652215a9e48d024512/pyseqan-1.1.0.tar.gz#sha256=eb245e2dde8b774f5632dc97e8fd42f54e55b88c6cd8fc0742b40fb3f7d06b2d (from https://pypi.org/simple/pyseqan/), version: 1.1.0 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/03/8c/5b51b99ae1ce8c44e880ce7dce69709baffad0a57c3e89514ec1a21d2561/pyseqan-1.1.1.tar.gz#sha256=afc830c8323551a229adf4904ffcbd8bee6ac9a06a25f925e1be71af4e0af97c (from https://pypi.org/simple/pyseqan/), version: 1.1.1 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/26/4a/a93baf01cb176fbf7619e5cc79edc2046ac43e0257f76d940f11db7d0bf5/pyseqan-1.1.2.tar.gz#sha256=33772d9494e970ab62b531d906125eaafdc9ed077a6170d0195ba9cf8ee09141 (from https://pypi.org/simple/pyseqan/), version: 1.1.2 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/08/6c/d1d7fb85484ebd064cecc165f00306590181f716659df9d4abfcf83c6d43/pyseqan-1.1.3.tar.gz#sha256=86bd7404e5a25871c8fb5c2c90c5a33905892f1c4e917b1f0730b8766378c2de (from https://pypi.org/simple/pyseqan/), version: 1.1.3 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/ab/e8/d1cd44f4f839f828cc46e51ad806c96adce34c6028e04cfb74f30a0dfaf4/pyseqan-1.1.4.tar.gz#sha256=10aba2d236a3215005f1c6b3d4c7a4f05c2b9c331a632028bca33469f805467b (from https://pypi.org/simple/pyseqan/), version: 1.1.4 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/74/81/874d7f326a90d98afd08a03170f992597b5d653ebb6c7adb673b139a1f1c/pyseqan-1.1.6.tar.gz#sha256=a1f842c786c2294f438a623590ad99bc051d37489bfbb6e57583665a1999cae1 (from https://pypi.org/simple/pyseqan/), version: 1.1.6 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/cd/17/be48f8e5e0e4de4d9e0af7333f54afb0bdebff43fa16a114a7dd13f6a8dc/pyseqan-1.1.7.tar.gz#sha256=c75c3ec688d12644b14104826fba02efabd6ad09dd5410fff312217ba8176421 (from https://pypi.org/simple/pyseqan/), version: 1.1.7 2019-06-30T08:20:43 Found link https://files.pythonhosted.org/packages/b1/07/bfcd2f58723f4f1b823c2e4d5519edfe77624408239f4a4615a9cb37338b/pyseqan-1.1.8.tar.gz#sha256=1076576b140e7b5dbd05d958f7f8f20e8e3c2926ef43a330f68d7b45b96a418f (from https://pypi.org/simple/pyseqan/), version: 1.1.8 2019-06-30T08:20:43 Using version 1.1.6 (newest of versions: 1.1.6) 2019-06-30T08:20:43 Created temporary directory: /tmp/pip-unpack-o7esfwqo 2019-06-30T08:20:44 Downloading https://files.pythonhosted.org/packages/74/81/874d7f326a90d98afd08a03170f992597b5d653ebb6c7adb673b139a1f1c/pyseqan-1.1.6.tar.gz (198kB) 2019-06-30T08:20:44 Downloading from URL https://files.pythonhosted.org/packages/74/81/874d7f326a90d98afd08a03170f992597b5d653ebb6c7adb673b139a1f1c/pyseqan-1.1.6.tar.gz#sha256=a1f842c786c2294f438a623590ad99bc051d37489bfbb6e57583665a1999cae1 (from https://pypi.org/simple/pyseqan/) 2019-06-30T08:20:44 Added pyseqan==1.1.6 from https://files.pythonhosted.org/packages/74/81/874d7f326a90d98afd08a03170f992597b5d653ebb6c7adb673b139a1f1c/pyseqan-1.1.6.tar.gz#sha256=a1f842c786c2294f438a623590ad99bc051d37489bfbb6e57583665a1999cae1 to build tracker '/tmp/pip-req-tracker-569t0y6j' 2019-06-30T08:20:44 Running setup.py (path:/tmp/pip-wheel-q_107cfz/pyseqan/setup.py) egg_info for package pyseqan 2019-06-30T08:20:44 Running command python setup.py egg_info 2019-06-30T08:20:46 ************************************************************* 2019-06-30T08:20:46 *** I have detected that you have not run configure.py. 2019-06-30T08:20:46 ************************************************************* 2019-06-30T08:20:46 *** Additionally, no global config files were found. 2019-06-30T08:20:46 *** I will go ahead with the default configuration. 2019-06-30T08:20:46 *** In all likelihood, this will not work out. 2019-06-30T08:20:46 *** 2019-06-30T08:20:46 *** See README_SETUP.txt for more information. 2019-06-30T08:20:46 *** 2019-06-30T08:20:46 *** If the build does fail, just re-run configure.py with the 2019-06-30T08:20:46 *** correct arguments, and then retry. Good luck! 2019-06-30T08:20:46 ************************************************************* 2019-06-30T08:20:46 *** HIT Ctrl-C NOW IF THIS IS NOT WHAT YOU WANT 2019-06-30T08:20:46 ************************************************************* 2019-06-30T08:20:56 Continuing in 10 seconds... 2019-06-30T08:20:56 Continuing in 9 seconds... 2019-06-30T08:20:56 Continuing in 8 seconds... 2019-06-30T08:20:56 Continuing in 7 seconds... 2019-06-30T08:20:56 Continuing in 6 seconds... 2019-06-30T08:20:56 Continuing in 5 seconds... 2019-06-30T08:20:56 Continuing in 4 seconds... 2019-06-30T08:20:56 Continuing in 3 seconds... 2019-06-30T08:20:56 Continuing in 2 seconds... 2019-06-30T08:20:56 Continuing in 1 seconds... 2019-06-30T08:20:56 Traceback (most recent call last): 2019-06-30T08:20:56 File "", line 1, in 2019-06-30T08:20:56 File "/tmp/pip-wheel-q_107cfz/pyseqan/setup.py", line 152, in 2019-06-30T08:20:56 main() 2019-06-30T08:20:56 File "/tmp/pip-wheel-q_107cfz/pyseqan/setup.py", line 64, in main 2019-06-30T08:20:56 ] + conf['BOOST_INC_DIR'] + [os.path.join(conf['SEQAN_DIR'], 'include')] 2019-06-30T08:20:56 File "/usr/lib/python3.7/posixpath.py", line 80, in join 2019-06-30T08:20:56 a = os.fspath(a) 2019-06-30T08:20:56 TypeError: expected str, bytes or os.PathLike object, not NoneType 2019-06-30T08:20:56 Cleaning up... 2019-06-30T08:20:56 Removing source in /tmp/pip-wheel-q_107cfz/pyseqan 2019-06-30T08:20:56 Removed pyseqan==1.1.6 from https://files.pythonhosted.org/packages/74/81/874d7f326a90d98afd08a03170f992597b5d653ebb6c7adb673b139a1f1c/pyseqan-1.1.6.tar.gz#sha256=a1f842c786c2294f438a623590ad99bc051d37489bfbb6e57583665a1999cae1 from build tracker '/tmp/pip-req-tracker-569t0y6j' 2019-06-30T08:20:56 Removed build tracker '/tmp/pip-req-tracker-569t0y6j' 2019-06-30T08:20:56 ERROR: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-wheel-q_107cfz/pyseqan/ 2019-06-30T08:20:56 Exception information: 2019-06-30T08:20:56 Traceback (most recent call last): 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main 2019-06-30T08:20:56 status = self.run(options, args) 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 164, in run 2019-06-30T08:20:56 resolver.resolve(requirement_set) 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 131, in resolve 2019-06-30T08:20:56 self._resolve_one(requirement_set, req) 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 294, in _resolve_one 2019-06-30T08:20:56 abstract_dist = self._get_abstract_dist_for(req_to_install) 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 242, in _get_abstract_dist_for 2019-06-30T08:20:56 self.require_hashes 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/operations/prepare.py", line 362, in prepare_linked_requirement 2019-06-30T08:20:56 abstract_dist.prep_for_dist(finder, self.build_isolation) 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/operations/prepare.py", line 171, in prep_for_dist 2019-06-30T08:20:56 self.req.prepare_metadata() 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/req/req_install.py", line 537, in prepare_metadata 2019-06-30T08:20:56 self.run_egg_info() 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/req/req_install.py", line 615, in run_egg_info 2019-06-30T08:20:56 command_desc='python setup.py egg_info') 2019-06-30T08:20:56 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/utils/misc.py", line 776, in call_subprocess 2019-06-30T08:20:56 % (command_desc, proc.returncode, cwd)) 2019-06-30T08:20:56 pip._internal.exceptions.InstallationError: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-wheel-q_107cfz/pyseqan/