2019-07-01T10:35:21 Created temporary directory: /tmp/pip-ephem-wheel-cache-hmei1e23
2019-07-01T10:35:21 Created temporary directory: /tmp/pip-req-tracker-vsjav3xt
2019-07-01T10:35:21 Created requirements tracker '/tmp/pip-req-tracker-vsjav3xt'
2019-07-01T10:35:21 Created temporary directory: /tmp/pip-wheel-g2twloe_
2019-07-01T10:35:21 Collecting lpdec==2015.1
2019-07-01T10:35:21   1 location(s) to search for versions of lpdec:
2019-07-01T10:35:21   * https://pypi.org/simple/lpdec/
2019-07-01T10:35:21   Getting page https://pypi.org/simple/lpdec/
2019-07-01T10:35:21   Analyzing links from page https://pypi.org/simple/lpdec/
2019-07-01T10:35:22     Found link https://files.pythonhosted.org/packages/b2/b2/c34fea5f4b4b5cd6cac6a7ca6d565b7482fe3ccbf743b68c6bb1f7573cc4/lpdec-2014.3.tar.gz#sha256=8ef48420de79ac103ce54af9e0d62511c5e03cd7599f774e12880199d0b2b3a3 (from https://pypi.org/simple/lpdec/), version: 2014.3
2019-07-01T10:35:22     Found link https://files.pythonhosted.org/packages/c3/4a/a8edf71699d7a37313ca60a24d552e0a277cdb0fa363510f36774226c95e/lpdec-2015.1.tar.gz#sha256=e0b3c4427dfb476c9efde86fae64c08098464292b60f09a4de094079be92fab3 (from https://pypi.org/simple/lpdec/), version: 2015.1
2019-07-01T10:35:22   Using version 2015.1 (newest of versions: 2015.1)
2019-07-01T10:35:22   Created temporary directory: /tmp/pip-unpack-wtan593e
2019-07-01T10:35:22   Downloading https://files.pythonhosted.org/packages/c3/4a/a8edf71699d7a37313ca60a24d552e0a277cdb0fa363510f36774226c95e/lpdec-2015.1.tar.gz (1.7MB)
2019-07-01T10:35:22   Downloading from URL https://files.pythonhosted.org/packages/c3/4a/a8edf71699d7a37313ca60a24d552e0a277cdb0fa363510f36774226c95e/lpdec-2015.1.tar.gz#sha256=e0b3c4427dfb476c9efde86fae64c08098464292b60f09a4de094079be92fab3 (from https://pypi.org/simple/lpdec/)
2019-07-01T10:35:24   Added lpdec==2015.1 from https://files.pythonhosted.org/packages/c3/4a/a8edf71699d7a37313ca60a24d552e0a277cdb0fa363510f36774226c95e/lpdec-2015.1.tar.gz#sha256=e0b3c4427dfb476c9efde86fae64c08098464292b60f09a4de094079be92fab3 to build tracker '/tmp/pip-req-tracker-vsjav3xt'
2019-07-01T10:35:24     Running setup.py (path:/tmp/pip-wheel-g2twloe_/lpdec/setup.py) egg_info for package lpdec
2019-07-01T10:35:24     Running command python setup.py egg_info
2019-07-01T10:35:59     /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-g2twloe_/lpdec/lpdec/codes/polar_helpers.pyx
2019-07-01T10:35:59       tree = Parsing.p_module(s, pxd, full_module_name)
2019-07-01T10:35:59     warning: lpdec/codes/polar_helpers.pyx:183:26: Index should be typed for more efficient access
2019-07-01T10:35:59     /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-g2twloe_/lpdec/lpdec/codes/trellis.pxd
2019-07-01T10:35:59       tree = Parsing.p_module(s, pxd, full_module_name)
2019-07-01T10:35:59     /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-g2twloe_/lpdec/lpdec/decoders/adaptivelp_glpk.pyx
2019-07-01T10:35:59       tree = Parsing.p_module(s, pxd, full_module_name)

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59     import numpy as np
2019-07-01T10:35:59     cimport numpy as np
2019-07-01T10:35:59     from numpy.math cimport INFINITY
2019-07-01T10:35:59     from libc.math cimport fabs, sqrt, fmin, fmax, atanh, isnan, tanh
2019-07-01T10:35:59     import gurobimh as g
2019-07-01T10:35:59     cimport gurobimh as g
2019-07-01T10:35:59            ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:20:8: 'gurobimh.pxd' not found

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59         cdef public double minCutoff, objBufLim, iterationLimit, sdMin, sdMax, sdX
2019-07-01T10:35:59         cdef public int removeInactive, maxRPCrounds, superDual, cutLimit
2019-07-01T10:35:59         cdef np.int_t[:,::1] hmat, htilde
2019-07-01T10:35:59         cdef np.int_t[::1] row
2019-07-01T10:35:59         cdef np.intp_t[::1] successfulCols
2019-07-01T10:35:59         cdef public g.Model model
2019-07-01T10:35:59                    ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:65:16: 'Model' is not a type identifier

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59         cdef public double minCutoff, objBufLim, iterationLimit, sdMin, sdMax, sdX
2019-07-01T10:35:59         cdef public int removeInactive, maxRPCrounds, superDual, cutLimit
2019-07-01T10:35:59         cdef np.int_t[:,::1] hmat, htilde
2019-07-01T10:35:59         cdef np.int_t[::1] row
2019-07-01T10:35:59         cdef np.intp_t[::1] successfulCols
2019-07-01T10:35:59         cdef public g.Model model
2019-07-01T10:35:59                            ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:65:24: C attribute of type '<error>' cannot be accessed from Python

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59             Decoder.setLLRs(self, llrs, sent)

2019-07-01T10:35:59             self.model.update()

2019-07-01T10:35:59         @staticmethod
2019-07-01T10:35:59         cdef int callbackFunction(g.GRBmodel *model, void *cbdata, int where, void *userdata):
2019-07-01T10:35:59                                  ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:247:30: 'GRBmodel' is not a type identifier

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...

2019-07-01T10:35:59         cdef void removeInactiveConstraints(self):
2019-07-01T10:35:59             """Removes constraints which are not active at the current solution."""
2019-07-01T10:35:59             cdef int i, removed = 0
2019-07-01T10:35:59             cdef double avgSlack, slack
2019-07-01T10:35:59             cdef g.Constr constr
2019-07-01T10:35:59                 ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:467:13: 'Constr' is not a type identifier

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59             """Remove all but the fixed constraints from the model.

2019-07-01T10:35:59             Usually there are no fixed constraints. In case of all-zero decoding, the zero
2019-07-01T10:35:59             constraints are fixed and not removed by this function.
2019-07-01T10:35:59             """
2019-07-01T10:35:59             cdef g.Constr constr
2019-07-01T10:35:59                 ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:492:13: 'Constr' is not a type identifier

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59         cdef int callbackFunction(g.GRBmodel *model, void *cbdata, int where, void *userdata):
2019-07-01T10:35:59             """Terminates the simplex algorithm if upper bound is hit."""
2019-07-01T10:35:59             cdef double ub = dereference(<double*>userdata)
2019-07-01T10:35:59             cdef double value
2019-07-01T10:35:59             if where == g.GRB_CB_SIMPLEX:
2019-07-01T10:35:59                 g.GRBcbget(cbdata, where, g.GRB_CB_SPX_OBJVAL, <void*> &value)
2019-07-01T10:35:59                           ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:252:23: Cannot convert 'void *' to Python object

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59         cdef int callbackFunction(g.GRBmodel *model, void *cbdata, int where, void *userdata):
2019-07-01T10:35:59             """Terminates the simplex algorithm if upper bound is hit."""
2019-07-01T10:35:59             cdef double ub = dereference(<double*>userdata)
2019-07-01T10:35:59             cdef double value
2019-07-01T10:35:59             if where == g.GRB_CB_SIMPLEX:
2019-07-01T10:35:59                 g.GRBcbget(cbdata, where, g.GRB_CB_SPX_OBJVAL, <void*> &value)
2019-07-01T10:35:59                                                               ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:252:59: Cannot convert 'void *' to Python object

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59             self.status = Decoder.OPTIMAL
2019-07-01T10:35:59             while True:
2019-07-01T10:35:59                 iteration += 1
2019-07-01T10:35:59                 self.timer.start()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, self.callbackFunction, <void*>&ub)
2019-07-01T10:35:59                                                               ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:272:59: Cannot convert 'int (<error>, void *, int, void *)' to Python object

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59             self.status = Decoder.OPTIMAL
2019-07-01T10:35:59             while True:
2019-07-01T10:35:59                 iteration += 1
2019-07-01T10:35:59                 self.timer.start()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, self.callbackFunction, <void*>&ub)
2019-07-01T10:35:59                                                                                  ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:272:78: Cannot convert 'void *' to Python object

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59                 self.timer.start()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, self.callbackFunction, <void*>&ub)
2019-07-01T10:35:59                 self.model.optimize()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, NULL, NULL)
2019-07-01T10:35:59                                                           ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:275:55: Cannot convert 'void *' to Python object

2019-07-01T10:35:59     Error compiling Cython file:
2019-07-01T10:35:59     ------------------------------------------------------------
2019-07-01T10:35:59     ...
2019-07-01T10:35:59                 self.timer.start()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, self.callbackFunction, <void*>&ub)
2019-07-01T10:35:59                 self.model.optimize()
2019-07-01T10:35:59                 if ub < INFINITY:
2019-07-01T10:35:59                     g.GRBsetcallbackfunc(self.model.model, NULL, NULL)
2019-07-01T10:35:59                                                                 ^
2019-07-01T10:35:59     ------------------------------------------------------------

2019-07-01T10:35:59     lpdec/decoders/adaptivelp_gurobi.pyx:275:61: Cannot convert 'void *' to Python object
2019-07-01T10:35:59     Traceback (most recent call last):
2019-07-01T10:35:59       File "<string>", line 1, in <module>
2019-07-01T10:35:59       File "/tmp/pip-wheel-g2twloe_/lpdec/setup.py", line 86, in <module>
2019-07-01T10:35:59         ext_modules=makeExtensions(),
2019-07-01T10:35:59       File "/tmp/pip-wheel-g2twloe_/lpdec/setup.py", line 39, in makeExtensions
2019-07-01T10:35:59         compiler_directives=directives)
2019-07-01T10:35:59       File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 1097, in cythonize
2019-07-01T10:35:59         cythonize_one(*args)
2019-07-01T10:35:59       File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 1220, in cythonize_one
2019-07-01T10:35:59         raise CompileError(None, pyx_file)
2019-07-01T10:35:59     Cython.Compiler.Errors.CompileError: lpdec/decoders/adaptivelp_gurobi.pyx
2019-07-01T10:35:59     Compiling lpdec/gfqla.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/iterative.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/adaptivelp_glpk.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/base.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/adaptivelp_gurobi.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/polar.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/branchcut/branching.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/branchcut/node.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/decoders/branchcut/decoder.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/codes/trellis.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     Compiling lpdec/codes/polar_helpers.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/numpy/__init__.pxd.
2019-07-01T10:35:59     [ 1/11] Cythonizing lpdec/codes/polar_helpers.pyx
2019-07-01T10:35:59     [ 2/11] Cythonizing lpdec/codes/trellis.pyx
2019-07-01T10:35:59     [ 3/11] Cythonizing lpdec/decoders/adaptivelp_glpk.pyx
2019-07-01T10:35:59     [ 4/11] Cythonizing lpdec/decoders/adaptivelp_gurobi.pyx
2019-07-01T10:36:00 Cleaning up...
2019-07-01T10:36:00   Removing source in /tmp/pip-wheel-g2twloe_/lpdec
2019-07-01T10:36:00 Removed lpdec==2015.1 from https://files.pythonhosted.org/packages/c3/4a/a8edf71699d7a37313ca60a24d552e0a277cdb0fa363510f36774226c95e/lpdec-2015.1.tar.gz#sha256=e0b3c4427dfb476c9efde86fae64c08098464292b60f09a4de094079be92fab3 from build tracker '/tmp/pip-req-tracker-vsjav3xt'
2019-07-01T10:36:00 Removed build tracker '/tmp/pip-req-tracker-vsjav3xt'
2019-07-01T10:36:00 ERROR: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-wheel-g2twloe_/lpdec/
2019-07-01T10:36:00 Exception information:
2019-07-01T10:36:00 Traceback (most recent call last):
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main
2019-07-01T10:36:00     status = self.run(options, args)
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 164, in run
2019-07-01T10:36:00     resolver.resolve(requirement_set)
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 131, in resolve
2019-07-01T10:36:00     self._resolve_one(requirement_set, req)
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 294, in _resolve_one
2019-07-01T10:36:00     abstract_dist = self._get_abstract_dist_for(req_to_install)
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolve.py", line 242, in _get_abstract_dist_for
2019-07-01T10:36:00     self.require_hashes
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/operations/prepare.py", line 362, in prepare_linked_requirement
2019-07-01T10:36:00     abstract_dist.prep_for_dist(finder, self.build_isolation)
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/operations/prepare.py", line 171, in prep_for_dist
2019-07-01T10:36:00     self.req.prepare_metadata()
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/req/req_install.py", line 537, in prepare_metadata
2019-07-01T10:36:00     self.run_egg_info()
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/req/req_install.py", line 615, in run_egg_info
2019-07-01T10:36:00     command_desc='python setup.py egg_info')
2019-07-01T10:36:00   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/utils/misc.py", line 776, in call_subprocess
2019-07-01T10:36:00     % (command_desc, proc.returncode, cwd))
2019-07-01T10:36:00 pip._internal.exceptions.InstallationError: Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-wheel-g2twloe_/lpdec/