2019-07-04T19:23:19 Created temporary directory: /tmp/pip-ephem-wheel-cache-urm_axmw
2019-07-04T19:23:19 Created temporary directory: /tmp/pip-req-tracker-8iq0msin
2019-07-04T19:23:19 Created requirements tracker '/tmp/pip-req-tracker-8iq0msin'
2019-07-04T19:23:19 Created temporary directory: /tmp/pip-wheel-wlg4x8wp
2019-07-04T19:23:19 Collecting seqlib==0.0.2
2019-07-04T19:23:19   1 location(s) to search for versions of seqlib:
2019-07-04T19:23:19   * https://pypi.org/simple/seqlib/
2019-07-04T19:23:19   Getting page https://pypi.org/simple/seqlib/
2019-07-04T19:23:19   Analyzing links from page https://pypi.org/simple/seqlib/
2019-07-04T19:23:19     Found link https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 (from https://pypi.org/simple/seqlib/), version: 0.0.2
2019-07-04T19:23:19     Found link https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz#sha256=1ef7389d3a2bf74472b77d77c28b5dd4b1f48488bb1a3f2ff5e64ea481003789 (from https://pypi.org/simple/seqlib/), version: 0.0.3
2019-07-04T19:23:19     Skipping link https://files.pythonhosted.org/packages/f0/04/ff9d870e2c374d0fa0b8127b0ab225c241fa6cbe28cb9cc58ad901fa0dd5/seqlib-0.0.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=81e611485e82d85a1bc6f3107fe5c0cb0e2646490b54e51c38af8174a23dfd45 (from https://pypi.org/simple/seqlib/); it is not compatible with this Python
2019-07-04T19:23:19     Found link https://files.pythonhosted.org/packages/98/24/83eecf315d536649ef65bfa3f99cf3115674f5ab46217e6a8126256d96a2/seqlib-0.0.5.tar.gz#sha256=894079eb3845d680ced3358150c872508943af7c67d589bd42bce2f1d4a88a22 (from https://pypi.org/simple/seqlib/), version: 0.0.5
2019-07-04T19:23:19     Skipping link https://files.pythonhosted.org/packages/07/06/4177555c0421661b1d3d8a6d60c25df7527a4653792f76f6077a217f9e2b/seqlib-0.0.6-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=3d06a237f1573c6f6c6b8150997d712f7b3f8ed5fdfb867ebe627329c5eb1148 (from https://pypi.org/simple/seqlib/); it is not compatible with this Python
2019-07-04T19:23:19     Found link https://files.pythonhosted.org/packages/62/35/8b843ab21b0a4cd669088097615d2a4008d683137485825f925bb3cb753b/seqlib-0.0.6.tar.gz#sha256=aa802c120213cd5b4a035bc57683766d766267e82a0ce918e019bc896c28a97e (from https://pypi.org/simple/seqlib/), version: 0.0.6
2019-07-04T19:23:19   Using version 0.0.2 (newest of versions: 0.0.2)
2019-07-04T19:23:19   Created temporary directory: /tmp/pip-unpack-7_s0c2wl
2019-07-04T19:23:19   Downloading https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz
2019-07-04T19:23:19   Downloading from URL https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 (from https://pypi.org/simple/seqlib/)
2019-07-04T19:23:19   Added seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 to build tracker '/tmp/pip-req-tracker-8iq0msin'
2019-07-04T19:23:19     Running setup.py (path:/tmp/pip-wheel-wlg4x8wp/seqlib/setup.py) egg_info for package seqlib
2019-07-04T19:23:19     Running command python setup.py egg_info
2019-07-04T19:23:21     running egg_info
2019-07-04T19:23:21     creating pip-egg-info/seqlib.egg-info
2019-07-04T19:23:21     writing pip-egg-info/seqlib.egg-info/PKG-INFO
2019-07-04T19:23:21     writing dependency_links to pip-egg-info/seqlib.egg-info/dependency_links.txt
2019-07-04T19:23:21     writing requirements to pip-egg-info/seqlib.egg-info/requires.txt
2019-07-04T19:23:21     writing top-level names to pip-egg-info/seqlib.egg-info/top_level.txt
2019-07-04T19:23:21     writing manifest file 'pip-egg-info/seqlib.egg-info/SOURCES.txt'
2019-07-04T19:23:21     reading manifest file 'pip-egg-info/seqlib.egg-info/SOURCES.txt'
2019-07-04T19:23:21     writing manifest file 'pip-egg-info/seqlib.egg-info/SOURCES.txt'
2019-07-04T19:23:21   Source in /tmp/pip-wheel-wlg4x8wp/seqlib has version 0.0.2, which satisfies requirement seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108
2019-07-04T19:23:21   Removed seqlib==0.0.2 from https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz#sha256=8cdebb37cfb507352026b08d97c84ca044d968c09b3cbe4a2fcec7a75745d108 from build tracker '/tmp/pip-req-tracker-8iq0msin'
2019-07-04T19:23:21 Building wheels for collected packages: seqlib
2019-07-04T19:23:21   Created temporary directory: /tmp/pip-wheel-_fv8xipo
2019-07-04T19:23:21   Building wheel for seqlib (setup.py): started
2019-07-04T19:23:21   Destination directory: /tmp/pip-wheel-_fv8xipo
2019-07-04T19:23:21   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-wlg4x8wp/seqlib/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_fv8xipo
2019-07-04T19:23:23   running bdist_wheel
2019-07-04T19:23:23   running build
2019-07-04T19:23:23   running build_py
2019-07-04T19:23:23   creating build
2019-07-04T19:23:23   creating build/lib.linux-armv7l-3.7
2019-07-04T19:23:23   creating build/lib.linux-armv7l-3.7/seqlib
2019-07-04T19:23:23   copying src/seqlib/__init__.py -> build/lib.linux-armv7l-3.7/seqlib
2019-07-04T19:23:23   running build_ext
2019-07-04T19:23:23   creating tmp
2019-07-04T19:23:23   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c /tmp/tmpjh4orlrb.cpp -o tmp/tmpjh4orlrb.o -std=c++14
2019-07-04T19:23:23   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c /tmp/tmp6h94p_26.cpp -o tmp/tmp6h94p_26.o -fvisibility=hidden
2019-07-04T19:23:23   error: [Errno 2] No such file or directory: '/tmp/pip-wheel-wlg4x8wp/seqlib/lib/SeqLib/htslib/Makefile'
2019-07-04T19:23:24   Building wheel for seqlib (setup.py): finished with status 'error'
2019-07-04T19:23:24   ERROR: Failed building wheel for seqlib
2019-07-04T19:23:24   Running setup.py clean for seqlib
2019-07-04T19:23:24   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-wlg4x8wp/seqlib/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2019-07-04T19:23:25   running clean
2019-07-04T19:23:25   removing 'build/lib.linux-armv7l-3.7' (and everything under it)
2019-07-04T19:23:25   'build/bdist.linux-armv7l' does not exist -- can't clean it
2019-07-04T19:23:25   'build/scripts-3.7' does not exist -- can't clean it
2019-07-04T19:23:25   removing 'build'
2019-07-04T19:23:25 Failed to build seqlib
2019-07-04T19:23:25 Cleaning up...
2019-07-04T19:23:25   Removing source in /tmp/pip-wheel-wlg4x8wp/seqlib
2019-07-04T19:23:25 Removed build tracker '/tmp/pip-req-tracker-8iq0msin'
2019-07-04T19:23:25 ERROR: Failed to build one or more wheels
2019-07-04T19:23:25 Exception information:
2019-07-04T19:23:25 Traceback (most recent call last):
2019-07-04T19:23:25   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main
2019-07-04T19:23:25     status = self.run(options, args)
2019-07-04T19:23:25   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 178, in run
2019-07-04T19:23:25     "Failed to build one or more wheels"
2019-07-04T19:23:25 pip._internal.exceptions.CommandError: Failed to build one or more wheels