2019-07-05T08:50:44 Created temporary directory: /tmp/pip-ephem-wheel-cache-on7o78k7
2019-07-05T08:50:44 Created temporary directory: /tmp/pip-req-tracker-2gfni3hk
2019-07-05T08:50:44 Created requirements tracker '/tmp/pip-req-tracker-2gfni3hk'
2019-07-05T08:50:44 Created temporary directory: /tmp/pip-wheel-6lo7x9id
2019-07-05T08:50:44 Collecting geometric==0.9.6
2019-07-05T08:50:44   1 location(s) to search for versions of geometric:
2019-07-05T08:50:44   * https://pypi.org/simple/geometric/
2019-07-05T08:50:44   Getting page https://pypi.org/simple/geometric/
2019-07-05T08:50:44   Analyzing links from page https://pypi.org/simple/geometric/
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/e9/77/a4780abe1e809e3ae2346d49e78f6319a3f27e7dd1c079c51a16a25540e4/geometric-0.8.3.tar.gz#sha256=fd2dfc9e8406d6f4f64a77ecdc8dacaf08907b873d5308393aa1cb87c699aade (from https://pypi.org/simple/geometric/), version: 0.8.3
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/29/01/4964331938caa35174aa0496a8af01b2e4ea2ab39bbcd1642ba21042388b/geometric-0.8.6.tar.gz#sha256=7b1c80033003c958a6059836eb058357996a04c8f24f0775aaf797ddc604b571 (from https://pypi.org/simple/geometric/), version: 0.8.6
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/1e/1e/1ee5ba9e361d80f5418a9f40ec6b2bfeea1d2bd3f44166e06cba874d766d/geometric-0.8.7.tar.gz#sha256=6e60f2271e6e44df74c696fa6a69f35ddb787a4c1dd47d9195120d46b79045a5 (from https://pypi.org/simple/geometric/), version: 0.8.7
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/a2/cc/9bb09e7166419d72b6ad096a043d5816706b7381711adcbe8eb6d268a79f/geometric-0.8.8.tar.gz#sha256=998af76ad8785b89209a965933c35f935b9c1b98a4f26b02b4b74bd1145c8b1c (from https://pypi.org/simple/geometric/), version: 0.8.8
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/72/b8/da60abfc3a65ba3d261e88e977059ced24cbaf76c56533ffdfd6ac720f40/geometric-0.8.9.tar.gz#sha256=d7d812d66efb0a54d5433a1642a25102a2c2efdf9c369b424e4ae31e555927e2 (from https://pypi.org/simple/geometric/), version: 0.8.9
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/88/74/e7afe01713d89c1bbbf74614d34271eb4dda1aca4334022f5d1bcc0669a1/geometric-0.9.0.tar.gz#sha256=ea028882ccdd43dd57a60b900e3a7ff0e690b243c6b77166fe0cfee5d2f80289 (from https://pypi.org/simple/geometric/), version: 0.9.0
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/09/3c/49909e306170bea455b643eca3a546cefc6f465e2630caac19d98bd29421/geometric-0.9.1.tar.gz#sha256=1ba2f594e903201b94b22557d4633d9955aa19f93b5a80fae9de310f01ef4339 (from https://pypi.org/simple/geometric/), version: 0.9.1
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/ed/e8/9631e96ec495cf781079b811e64a4fb665a5b8754b76e38e76ff92749ad6/geometric-0.9.2.tar.gz#sha256=db343036107691cef8f6ba521430c8236a3bf1666b8be8caeedeb36e35f79431 (from https://pypi.org/simple/geometric/), version: 0.9.2
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/33/88/afa15016a82669b9a9c432fbed31dfa4dc8487b9691ee5d9f1924ee70deb/geometric-0.9.3.tar.gz#sha256=4205199e9dc6d2587faa54b925ffc2e4f7471456add95ff4753d080091306a18 (from https://pypi.org/simple/geometric/), version: 0.9.3
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/0b/69/4e81e0255c1f9cd334d98be1543674b42e4b47ddcb08bcce34b11bb1f1d5/geometric-0.9.4.tar.gz#sha256=f5eb6b3659ce2902d1f4d841160dcc6332341bf302f94c4418696a551e38dbaf (from https://pypi.org/simple/geometric/), version: 0.9.4
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/52/b5/dfe255ea8a62b9f540860c4a470c5db2b80715c2ce6c544e8854de3e83f6/geometric-0.9.5.tar.gz#sha256=3b7ccab62b758957b61217234a7f072f0430f7c6c8c027515ee079e84837b174 (from https://pypi.org/simple/geometric/), version: 0.9.5
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/eb/0e/30eae707c741aecbb806d50139da210eec6f8b56b492f7838c8f43c90034/geometric-0.9.5.1.tar.gz#sha256=ce0dfdaea50410f52a6378caa0d4029701aad91f9cdd21c207ccf2d0f6d05f9c (from https://pypi.org/simple/geometric/), version: 0.9.5.1
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz#sha256=3afef468d1b9c928f54b88b61665b5de2074a25448fa72a3ecc0bcbae97e7e33 (from https://pypi.org/simple/geometric/), version: 0.9.6
2019-07-05T08:50:44     Found link https://files.pythonhosted.org/packages/eb/5c/fc91dcbb44303eb62741c0841251211b416b18e44c53cd49e8d5d7f4b7e1/geometric-0.9.7.1.tar.gz#sha256=900937f14430e5c6cff077ba4ffd1e76385040c94a8ea29fbe23ebeb81f13f73 (from https://pypi.org/simple/geometric/), version: 0.9.7.1
2019-07-05T08:50:44   Using version 0.9.6 (newest of versions: 0.9.6)
2019-07-05T08:50:44   Created temporary directory: /tmp/pip-unpack-ofm7v437
2019-07-05T08:50:44   Downloading https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz (181kB)
2019-07-05T08:50:44   Downloading from URL https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz#sha256=3afef468d1b9c928f54b88b61665b5de2074a25448fa72a3ecc0bcbae97e7e33 (from https://pypi.org/simple/geometric/)
2019-07-05T08:50:45   Added geometric==0.9.6 from https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz#sha256=3afef468d1b9c928f54b88b61665b5de2074a25448fa72a3ecc0bcbae97e7e33 to build tracker '/tmp/pip-req-tracker-2gfni3hk'
2019-07-05T08:50:45     Running setup.py (path:/tmp/pip-wheel-6lo7x9id/geometric/setup.py) egg_info for package geometric
2019-07-05T08:50:45     Running command python setup.py egg_info
2019-07-05T08:50:47     running egg_info
2019-07-05T08:50:47     creating pip-egg-info/geometric.egg-info
2019-07-05T08:50:47     writing entry points to pip-egg-info/geometric.egg-info/entry_points.txt
2019-07-05T08:50:47     writing pip-egg-info/geometric.egg-info/PKG-INFO
2019-07-05T08:50:47     writing dependency_links to pip-egg-info/geometric.egg-info/dependency_links.txt
2019-07-05T08:50:47     writing requirements to pip-egg-info/geometric.egg-info/requires.txt
2019-07-05T08:50:47     writing top-level names to pip-egg-info/geometric.egg-info/top_level.txt
2019-07-05T08:50:47     writing manifest file 'pip-egg-info/geometric.egg-info/SOURCES.txt'
2019-07-05T08:50:47     reading manifest file 'pip-egg-info/geometric.egg-info/SOURCES.txt'
2019-07-05T08:50:47     reading manifest template 'MANIFEST.in'
2019-07-05T08:50:47     writing manifest file 'pip-egg-info/geometric.egg-info/SOURCES.txt'
2019-07-05T08:50:48   Source in /tmp/pip-wheel-6lo7x9id/geometric has version 0.9.6, which satisfies requirement geometric==0.9.6 from https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz#sha256=3afef468d1b9c928f54b88b61665b5de2074a25448fa72a3ecc0bcbae97e7e33
2019-07-05T08:50:48   Removed geometric==0.9.6 from https://files.pythonhosted.org/packages/0c/73/bedc8394af2e9651e9d7cffac9225f9c022d8107d3bfa8873f1124fd52f3/geometric-0.9.6.tar.gz#sha256=3afef468d1b9c928f54b88b61665b5de2074a25448fa72a3ecc0bcbae97e7e33 from build tracker '/tmp/pip-req-tracker-2gfni3hk'
2019-07-05T08:50:48 Building wheels for collected packages: geometric
2019-07-05T08:50:48   Created temporary directory: /tmp/pip-wheel-l1qenua8
2019-07-05T08:50:48   Building wheel for geometric (setup.py): started
2019-07-05T08:50:48   Destination directory: /tmp/pip-wheel-l1qenua8
2019-07-05T08:50:48   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-6lo7x9id/geometric/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-l1qenua8
2019-07-05T08:50:50   running bdist_wheel
2019-07-05T08:50:50   running build
2019-07-05T08:50:50   running build_py
2019-07-05T08:50:50   creating build
2019-07-05T08:50:50   creating build/lib
2019-07-05T08:50:50   creating build/lib/geometric
2019-07-05T08:50:50   copying geometric/internal.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/optimize.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/run_json.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/molecule.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/rotate.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/PDB.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/nifty.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/_version.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/errors.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/__init__.py -> build/lib/geometric
2019-07-05T08:50:50   copying geometric/engine.py -> build/lib/geometric
2019-07-05T08:50:50   creating build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_openmm.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_hessian.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_errors.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_diff.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_run_json.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_qcengine.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_customengine.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/__init__.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_molecule.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_batch_opt.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/addons.py -> build/lib/geometric/tests
2019-07-05T08:50:50   copying geometric/tests/test_rotate.py -> build/lib/geometric/tests
2019-07-05T08:50:50   running egg_info
2019-07-05T08:50:50   writing geometric.egg-info/PKG-INFO
2019-07-05T08:50:50   writing top-level names to geometric.egg-info/top_level.txt
2019-07-05T08:50:50   writing dependency_links to geometric.egg-info/dependency_links.txt
2019-07-05T08:50:50   writing entry points to geometric.egg-info/entry_points.txt
2019-07-05T08:50:50   writing requirements to geometric.egg-info/requires.txt
2019-07-05T08:50:50   reading manifest file 'geometric.egg-info/SOURCES.txt'
2019-07-05T08:50:50   reading manifest template 'MANIFEST.in'
2019-07-05T08:50:50   writing manifest file 'geometric.egg-info/SOURCES.txt'
2019-07-05T08:50:50   creating build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/ala.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/ala_a99sb_min.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/ala_constraints.txt -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/alaglu.gro -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/captan.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/h2o2_h2o.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/water3.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   copying geometric/data/water6.pdb -> build/lib/geometric/data
2019-07-05T08:50:50   UPDATING build/lib/geometric/_version.py
2019-07-05T08:50:50   set build/lib/geometric/_version.py to '0.9.6'
2019-07-05T08:50:50   installing to build/bdist.linux-armv7l/wheel
2019-07-05T08:50:50   running install
2019-07-05T08:50:50   running install_lib
2019-07-05T08:50:50   creating build/bdist.linux-armv7l
2019-07-05T08:50:50   creating build/bdist.linux-armv7l/wheel
2019-07-05T08:50:50   creating build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:50   copying build/lib/geometric/internal.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:50   creating build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:50   copying build/lib/geometric/data/water6.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:50   copying build/lib/geometric/data/water3.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/captan.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/ala.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/h2o2_h2o.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/ala_constraints.txt -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/alaglu.gro -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   copying build/lib/geometric/data/ala_a99sb_min.pdb -> build/bdist.linux-armv7l/wheel/geometric/data
2019-07-05T08:50:51   creating build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_openmm.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_hessian.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_errors.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_diff.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_run_json.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_qcengine.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_customengine.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/__init__.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_molecule.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_batch_opt.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/addons.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/tests/test_rotate.py -> build/bdist.linux-armv7l/wheel/geometric/tests
2019-07-05T08:50:51   copying build/lib/geometric/optimize.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/run_json.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/molecule.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/rotate.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/PDB.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/nifty.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/_version.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/errors.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/__init__.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   copying build/lib/geometric/engine.py -> build/bdist.linux-armv7l/wheel/geometric
2019-07-05T08:50:51   running install_egg_info
2019-07-05T08:50:51   Copying geometric.egg-info to build/bdist.linux-armv7l/wheel/geometric-0.9.6-py3.5.egg-info
2019-07-05T08:50:51   running install_scripts
2019-07-05T08:50:51   creating build/bdist.linux-armv7l/wheel/geometric-0.9.6.dist-info/WHEEL
2019-07-05T08:50:51   creating '/tmp/pip-wheel-l1qenua8/geometric-0.9.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-05T08:50:51   adding 'geometric/PDB.py'
2019-07-05T08:50:51   adding 'geometric/__init__.py'
2019-07-05T08:50:51   adding 'geometric/_version.py'
2019-07-05T08:50:51   adding 'geometric/engine.py'
2019-07-05T08:50:51   adding 'geometric/errors.py'
2019-07-05T08:50:51   adding 'geometric/internal.py'
2019-07-05T08:50:51   adding 'geometric/molecule.py'
2019-07-05T08:50:51   adding 'geometric/nifty.py'
2019-07-05T08:50:51   adding 'geometric/optimize.py'
2019-07-05T08:50:51   adding 'geometric/rotate.py'
2019-07-05T08:50:51   adding 'geometric/run_json.py'
2019-07-05T08:50:51   adding 'geometric/data/ala.pdb'
2019-07-05T08:50:51   adding 'geometric/data/ala_a99sb_min.pdb'
2019-07-05T08:50:51   adding 'geometric/data/ala_constraints.txt'
2019-07-05T08:50:51   adding 'geometric/data/alaglu.gro'
2019-07-05T08:50:51   adding 'geometric/data/captan.pdb'
2019-07-05T08:50:51   adding 'geometric/data/h2o2_h2o.pdb'
2019-07-05T08:50:51   adding 'geometric/data/water3.pdb'
2019-07-05T08:50:51   adding 'geometric/data/water6.pdb'
2019-07-05T08:50:51   adding 'geometric/tests/__init__.py'
2019-07-05T08:50:51   adding 'geometric/tests/addons.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_batch_opt.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_customengine.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_diff.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_errors.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_hessian.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_molecule.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_openmm.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_qcengine.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_rotate.py'
2019-07-05T08:50:51   adding 'geometric/tests/test_run_json.py'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/METADATA'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/WHEEL'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/entry_points.txt'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/top_level.txt'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/zip-safe'
2019-07-05T08:50:51   adding 'geometric-0.9.6.dist-info/RECORD'
2019-07-05T08:50:51   removing build/bdist.linux-armv7l/wheel
2019-07-05T08:50:51   Building wheel for geometric (setup.py): finished with status 'done'
2019-07-05T08:50:51   Stored in directory: /tmp/tmp33yv9pyc
2019-07-05T08:50:51 Successfully built geometric
2019-07-05T08:50:51 Cleaning up...
2019-07-05T08:50:51   Removing source in /tmp/pip-wheel-6lo7x9id/geometric
2019-07-05T08:50:52 Removed build tracker '/tmp/pip-req-tracker-2gfni3hk'