2019-07-05T21:39:35 Created temporary directory: /tmp/pip-ephem-wheel-cache-mq1fxiht 2019-07-05T21:39:35 Created temporary directory: /tmp/pip-req-tracker-b9xm20qe 2019-07-05T21:39:35 Created requirements tracker '/tmp/pip-req-tracker-b9xm20qe' 2019-07-05T21:39:35 Created temporary directory: /tmp/pip-wheel-7t7u_x6u 2019-07-05T21:39:35 Collecting scipion-em-chimera==1.0.0b12 2019-07-05T21:39:35 1 location(s) to search for versions of scipion-em-chimera: 2019-07-05T21:39:35 * https://pypi.org/simple/scipion-em-chimera/ 2019-07-05T21:39:35 Getting page https://pypi.org/simple/scipion-em-chimera/ 2019-07-05T21:39:35 Analyzing links from page https://pypi.org/simple/scipion-em-chimera/ 2019-07-05T21:39:35 Found link https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz#sha256=d8f3494df7f333e9d8430884944c01c1ecc268f423e8a7c0400ab999dd2051f9 (from https://pypi.org/simple/scipion-em-chimera/), version: 1.0.0b12 2019-07-05T21:39:35 Using version 1.0.0b12 (newest of versions: 1.0.0b12) 2019-07-05T21:39:35 Created temporary directory: /tmp/pip-unpack-8yi1kzgo 2019-07-05T21:39:35 Downloading https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz (47kB) 2019-07-05T21:39:35 Downloading from URL https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz#sha256=d8f3494df7f333e9d8430884944c01c1ecc268f423e8a7c0400ab999dd2051f9 (from https://pypi.org/simple/scipion-em-chimera/) 2019-07-05T21:39:36 Added scipion-em-chimera==1.0.0b12 from https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz#sha256=d8f3494df7f333e9d8430884944c01c1ecc268f423e8a7c0400ab999dd2051f9 to build tracker '/tmp/pip-req-tracker-b9xm20qe' 2019-07-05T21:39:36 Running setup.py (path:/tmp/pip-wheel-7t7u_x6u/scipion-em-chimera/setup.py) egg_info for package scipion-em-chimera 2019-07-05T21:39:36 Running command python setup.py egg_info 2019-07-05T21:39:38 running egg_info 2019-07-05T21:39:38 creating pip-egg-info/scipion_em_chimera.egg-info 2019-07-05T21:39:38 writing pip-egg-info/scipion_em_chimera.egg-info/PKG-INFO 2019-07-05T21:39:38 writing dependency_links to pip-egg-info/scipion_em_chimera.egg-info/dependency_links.txt 2019-07-05T21:39:38 writing top-level names to pip-egg-info/scipion_em_chimera.egg-info/top_level.txt 2019-07-05T21:39:38 writing manifest file 'pip-egg-info/scipion_em_chimera.egg-info/SOURCES.txt' 2019-07-05T21:39:38 reading manifest file 'pip-egg-info/scipion_em_chimera.egg-info/SOURCES.txt' 2019-07-05T21:39:38 reading manifest template 'MANIFEST.in' 2019-07-05T21:39:38 writing manifest file 'pip-egg-info/scipion_em_chimera.egg-info/SOURCES.txt' 2019-07-05T21:39:38 Source in /tmp/pip-wheel-7t7u_x6u/scipion-em-chimera has version 1.0.0b12, which satisfies requirement scipion-em-chimera==1.0.0b12 from https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz#sha256=d8f3494df7f333e9d8430884944c01c1ecc268f423e8a7c0400ab999dd2051f9 2019-07-05T21:39:38 Removed scipion-em-chimera==1.0.0b12 from https://files.pythonhosted.org/packages/93/43/eec43890aa69a540b1e340c254546122fb1243890f9837e4d3ddb4697682/scipion-em-chimera-1.0.0b12.tar.gz#sha256=d8f3494df7f333e9d8430884944c01c1ecc268f423e8a7c0400ab999dd2051f9 from build tracker '/tmp/pip-req-tracker-b9xm20qe' 2019-07-05T21:39:38 Building wheels for collected packages: scipion-em-chimera 2019-07-05T21:39:38 Created temporary directory: /tmp/pip-wheel-z5g_kjst 2019-07-05T21:39:38 Building wheel for scipion-em-chimera (setup.py): started 2019-07-05T21:39:38 Destination directory: /tmp/pip-wheel-z5g_kjst 2019-07-05T21:39:38 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-7t7u_x6u/scipion-em-chimera/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-z5g_kjst 2019-07-05T21:39:40 running bdist_wheel 2019-07-05T21:39:40 running build 2019-07-05T21:39:40 running build_py 2019-07-05T21:39:40 creating build 2019-07-05T21:39:40 creating build/lib 2019-07-05T21:39:40 creating build/lib/chimera 2019-07-05T21:39:40 copying chimera/bibtex.py -> build/lib/chimera 2019-07-05T21:39:40 copying chimera/constants.py -> build/lib/chimera 2019-07-05T21:39:40 copying chimera/editList.py -> build/lib/chimera 2019-07-05T21:39:40 copying chimera/__init__.py -> build/lib/chimera 2019-07-05T21:39:40 copying chimera/parser_h1.py -> build/lib/chimera 2019-07-05T21:39:40 copying chimera/wizards.py -> build/lib/chimera 2019-07-05T21:39:40 creating build/lib/chimera/viewers 2019-07-05T21:39:40 copying chimera/viewers/viewer.py -> build/lib/chimera/viewers 2019-07-05T21:39:40 copying chimera/viewers/__init__.py -> build/lib/chimera/viewers 2019-07-05T21:39:40 copying chimera/viewers/viewer_contacts.py -> build/lib/chimera/viewers 2019-07-05T21:39:40 creating build/lib/chimera/tests 2019-07-05T21:39:40 copying chimera/tests/test_protocol_chimera_operate.py -> build/lib/chimera/tests 2019-07-05T21:39:40 copying chimera/tests/test_protocol_contact.py -> build/lib/chimera/tests 2019-07-05T21:39:40 copying chimera/tests/__init__.py -> build/lib/chimera/tests 2019-07-05T21:39:40 copying chimera/tests/test_protocol_chimera_fit.py -> build/lib/chimera/tests 2019-07-05T21:39:40 copying chimera/tests/test_protocol_modeller_search.py -> build/lib/chimera/tests 2019-07-05T21:39:40 creating build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_operate.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_fit.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/__init__.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_contacts.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_modeller_search.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_base.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 copying chimera/protocols/protocol_restore.py -> build/lib/chimera/protocols 2019-07-05T21:39:40 installing to build/bdist.linux-armv7l/wheel 2019-07-05T21:39:40 running install 2019-07-05T21:39:41 running install_lib 2019-07-05T21:39:41 creating build/bdist.linux-armv7l 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel/chimera/viewers 2019-07-05T21:39:41 copying build/lib/chimera/viewers/viewer.py -> build/bdist.linux-armv7l/wheel/chimera/viewers 2019-07-05T21:39:41 copying build/lib/chimera/viewers/__init__.py -> build/bdist.linux-armv7l/wheel/chimera/viewers 2019-07-05T21:39:41 copying build/lib/chimera/viewers/viewer_contacts.py -> build/bdist.linux-armv7l/wheel/chimera/viewers 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/tests/test_protocol_chimera_operate.py -> build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/tests/test_protocol_contact.py -> build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/tests/__init__.py -> build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/tests/test_protocol_chimera_fit.py -> build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/tests/test_protocol_modeller_search.py -> build/bdist.linux-armv7l/wheel/chimera/tests 2019-07-05T21:39:41 copying build/lib/chimera/bibtex.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 copying build/lib/chimera/constants.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 copying build/lib/chimera/editList.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 copying build/lib/chimera/__init__.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 copying build/lib/chimera/parser_h1.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_operate.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_fit.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_contacts.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_modeller_search.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_base.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/protocols/protocol_restore.py -> build/bdist.linux-armv7l/wheel/chimera/protocols 2019-07-05T21:39:41 copying build/lib/chimera/wizards.py -> build/bdist.linux-armv7l/wheel/chimera 2019-07-05T21:39:41 running install_egg_info 2019-07-05T21:39:41 running egg_info 2019-07-05T21:39:41 writing top-level names to scipion_em_chimera.egg-info/top_level.txt 2019-07-05T21:39:41 writing scipion_em_chimera.egg-info/PKG-INFO 2019-07-05T21:39:41 writing dependency_links to scipion_em_chimera.egg-info/dependency_links.txt 2019-07-05T21:39:41 reading manifest file 'scipion_em_chimera.egg-info/SOURCES.txt' 2019-07-05T21:39:41 reading manifest template 'MANIFEST.in' 2019-07-05T21:39:41 writing manifest file 'scipion_em_chimera.egg-info/SOURCES.txt' 2019-07-05T21:39:41 Copying scipion_em_chimera.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_chimera-1.0.0b12-py3.5.egg-info 2019-07-05T21:39:41 running install_scripts 2019-07-05T21:39:41 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2019-07-05T21:39:41 creating build/bdist.linux-armv7l/wheel/scipion_em_chimera-1.0.0b12.dist-info/WHEEL 2019-07-05T21:39:41 creating '/tmp/pip-wheel-z5g_kjst/scipion_em_chimera-1.0.0b12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-05T21:39:41 adding 'chimera/__init__.py' 2019-07-05T21:39:41 adding 'chimera/bibtex.py' 2019-07-05T21:39:41 adding 'chimera/constants.py' 2019-07-05T21:39:41 adding 'chimera/editList.py' 2019-07-05T21:39:41 adding 'chimera/parser_h1.py' 2019-07-05T21:39:41 adding 'chimera/wizards.py' 2019-07-05T21:39:41 adding 'chimera/protocols/__init__.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_base.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_contacts.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_fit.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_modeller_search.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_operate.py' 2019-07-05T21:39:41 adding 'chimera/protocols/protocol_restore.py' 2019-07-05T21:39:41 adding 'chimera/tests/__init__.py' 2019-07-05T21:39:41 adding 'chimera/tests/test_protocol_chimera_fit.py' 2019-07-05T21:39:41 adding 'chimera/tests/test_protocol_chimera_operate.py' 2019-07-05T21:39:41 adding 'chimera/tests/test_protocol_contact.py' 2019-07-05T21:39:41 adding 'chimera/tests/test_protocol_modeller_search.py' 2019-07-05T21:39:41 adding 'chimera/viewers/__init__.py' 2019-07-05T21:39:41 adding 'chimera/viewers/viewer.py' 2019-07-05T21:39:41 adding 'chimera/viewers/viewer_contacts.py' 2019-07-05T21:39:41 adding 'scipion_em_chimera-1.0.0b12.dist-info/LICENSE' 2019-07-05T21:39:41 adding 'scipion_em_chimera-1.0.0b12.dist-info/METADATA' 2019-07-05T21:39:41 adding 'scipion_em_chimera-1.0.0b12.dist-info/WHEEL' 2019-07-05T21:39:41 adding 'scipion_em_chimera-1.0.0b12.dist-info/top_level.txt' 2019-07-05T21:39:41 adding 'scipion_em_chimera-1.0.0b12.dist-info/RECORD' 2019-07-05T21:39:41 removing build/bdist.linux-armv7l/wheel 2019-07-05T21:39:41 Building wheel for scipion-em-chimera (setup.py): finished with status 'done' 2019-07-05T21:39:41 Stored in directory: /tmp/tmpakmt8nzf 2019-07-05T21:39:41 Successfully built scipion-em-chimera 2019-07-05T21:39:41 Cleaning up... 2019-07-05T21:39:41 Removing source in /tmp/pip-wheel-7t7u_x6u/scipion-em-chimera 2019-07-05T21:39:41 Removed build tracker '/tmp/pip-req-tracker-b9xm20qe'