2019-07-06T00:51:51 Created temporary directory: /tmp/pip-ephem-wheel-cache-mz9n4cmu 2019-07-06T00:51:51 Created temporary directory: /tmp/pip-req-tracker-luvo29dr 2019-07-06T00:51:51 Created requirements tracker '/tmp/pip-req-tracker-luvo29dr' 2019-07-06T00:51:51 Created temporary directory: /tmp/pip-wheel-4xsfas8r 2019-07-06T00:51:51 Collecting gdcdictionary==1.2.0 2019-07-06T00:51:51 1 location(s) to search for versions of gdcdictionary: 2019-07-06T00:51:51 * https://pypi.org/simple/gdcdictionary/ 2019-07-06T00:51:51 Getting page https://pypi.org/simple/gdcdictionary/ 2019-07-06T00:51:51 Analyzing links from page https://pypi.org/simple/gdcdictionary/ 2019-07-06T00:51:51 Found link https://files.pythonhosted.org/packages/b6/3b/7d008d8cbfe084190813bfc3cbf24320f49b458633934de1fffa0450d3b2/gdcdictionary-1.1.0.tar.gz#sha256=bc2dc3a353a9475578e2c51fa442bceba38da4041949ee506d9e945c8ffa4692 (from https://pypi.org/simple/gdcdictionary/), version: 1.1.0 2019-07-06T00:51:51 Skipping link https://files.pythonhosted.org/packages/e2/d5/bae895992a878a700bf82980b724b1123d15f3c504a243477a263852c5e1/gdcdictionary-1.2.0-py2.7.egg#sha256=596e82fead5653beb8296ca505fb9f6e3d51c631e6605312406b4118fc7c42ae (from https://pypi.org/simple/gdcdictionary/); unsupported archive format: .egg 2019-07-06T00:51:51 Found link https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz#sha256=02357752c0a8bd5d820539a0f9648b64eef4523ee3a130e45e915c4d4801a183 (from https://pypi.org/simple/gdcdictionary/), version: 1.2.0 2019-07-06T00:51:51 Using version 1.2.0 (newest of versions: 1.2.0) 2019-07-06T00:51:51 Created temporary directory: /tmp/pip-unpack-8801_0sx 2019-07-06T00:51:51 Downloading https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz (41kB) 2019-07-06T00:51:51 Downloading from URL https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz#sha256=02357752c0a8bd5d820539a0f9648b64eef4523ee3a130e45e915c4d4801a183 (from https://pypi.org/simple/gdcdictionary/) 2019-07-06T00:51:51 Added gdcdictionary==1.2.0 from https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz#sha256=02357752c0a8bd5d820539a0f9648b64eef4523ee3a130e45e915c4d4801a183 to build tracker '/tmp/pip-req-tracker-luvo29dr' 2019-07-06T00:51:51 Running setup.py (path:/tmp/pip-wheel-4xsfas8r/gdcdictionary/setup.py) egg_info for package gdcdictionary 2019-07-06T00:51:51 Running command python setup.py egg_info 2019-07-06T00:51:53 running egg_info 2019-07-06T00:51:53 creating pip-egg-info/gdcdictionary.egg-info 2019-07-06T00:51:53 writing top-level names to pip-egg-info/gdcdictionary.egg-info/top_level.txt 2019-07-06T00:51:53 writing requirements to pip-egg-info/gdcdictionary.egg-info/requires.txt 2019-07-06T00:51:53 writing pip-egg-info/gdcdictionary.egg-info/PKG-INFO 2019-07-06T00:51:53 writing dependency_links to pip-egg-info/gdcdictionary.egg-info/dependency_links.txt 2019-07-06T00:51:53 writing manifest file 'pip-egg-info/gdcdictionary.egg-info/SOURCES.txt' 2019-07-06T00:51:53 reading manifest file 'pip-egg-info/gdcdictionary.egg-info/SOURCES.txt' 2019-07-06T00:51:53 reading manifest template 'MANIFEST.in' 2019-07-06T00:51:53 warning: no files found matching 'Pipfile.lock' 2019-07-06T00:51:53 warning: no files found matching '*.yaml' under directory 'schemas/' 2019-07-06T00:51:53 writing manifest file 'pip-egg-info/gdcdictionary.egg-info/SOURCES.txt' 2019-07-06T00:51:54 Source in /tmp/pip-wheel-4xsfas8r/gdcdictionary has version 1.2.0, which satisfies requirement gdcdictionary==1.2.0 from https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz#sha256=02357752c0a8bd5d820539a0f9648b64eef4523ee3a130e45e915c4d4801a183 2019-07-06T00:51:54 Removed gdcdictionary==1.2.0 from https://files.pythonhosted.org/packages/2d/dd/a7ad2a7016786db2c2f066d5215cb1b9aac2c6000c60fbaba36cb95c352b/gdcdictionary-1.2.0.tar.gz#sha256=02357752c0a8bd5d820539a0f9648b64eef4523ee3a130e45e915c4d4801a183 from build tracker '/tmp/pip-req-tracker-luvo29dr' 2019-07-06T00:51:54 Building wheels for collected packages: gdcdictionary 2019-07-06T00:51:54 Created temporary directory: /tmp/pip-wheel-bg4txsfj 2019-07-06T00:51:54 Building wheel for gdcdictionary (setup.py): started 2019-07-06T00:51:54 Destination directory: /tmp/pip-wheel-bg4txsfj 2019-07-06T00:51:54 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-4xsfas8r/gdcdictionary/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bg4txsfj 2019-07-06T00:51:55 running bdist_wheel 2019-07-06T00:51:55 running build 2019-07-06T00:51:55 running build_py 2019-07-06T00:51:56 creating build 2019-07-06T00:51:56 creating build/lib 2019-07-06T00:51:56 creating build/lib/gdcdictionary 2019-07-06T00:51:56 copying gdcdictionary/schema_test.py -> build/lib/gdcdictionary 2019-07-06T00:51:56 copying gdcdictionary/__init__.py -> build/lib/gdcdictionary 2019-07-06T00:51:56 creating build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/_definitions.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/family_history.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/keyword.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/exposure.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/experiment.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/acknowledgement.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/aligned_reads_index.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/publication.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/sample.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/treatment.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/submitted_methylation.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/slide_image.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/aliquot.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/read_group.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/experimental_metadata.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/case.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/clinical_test.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/submitted_aligned_reads.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/project.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/slide_count.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/submitted_somatic_mutation.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/program.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/submitted_copy_number.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/_terms.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/_settings.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/slide.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/diagnosis.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/submitted_unaligned_reads.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/core_metadata_collection.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/read_group_qc.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 copying gdcdictionary/schemas/demographic.yaml -> build/lib/gdcdictionary/schemas 2019-07-06T00:51:56 creating build/lib/gdcdictionary/schemas/projects 2019-07-06T00:51:56 copying gdcdictionary/schemas/projects/project1.yaml -> build/lib/gdcdictionary/schemas/projects 2019-07-06T00:51:56 installing to build/bdist.linux-armv7l/wheel 2019-07-06T00:51:56 running install 2019-07-06T00:51:56 running install_lib 2019-07-06T00:51:56 creating build/bdist.linux-armv7l 2019-07-06T00:51:56 creating build/bdist.linux-armv7l/wheel 2019-07-06T00:51:56 creating build/bdist.linux-armv7l/wheel/gdcdictionary 2019-07-06T00:51:56 creating build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/_definitions.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/family_history.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/keyword.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/exposure.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/experiment.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/acknowledgement.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/aligned_reads_index.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/publication.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/sample.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/treatment.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/submitted_methylation.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/slide_image.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/aliquot.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/read_group.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/experimental_metadata.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 creating build/bdist.linux-armv7l/wheel/gdcdictionary/schemas/projects 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/projects/project1.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas/projects 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/case.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/clinical_test.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/submitted_aligned_reads.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/project.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/slide_count.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/submitted_somatic_mutation.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/program.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/submitted_copy_number.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/_terms.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/_settings.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/slide.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/diagnosis.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/submitted_unaligned_reads.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/core_metadata_collection.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/read_group_qc.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schemas/demographic.yaml -> build/bdist.linux-armv7l/wheel/gdcdictionary/schemas 2019-07-06T00:51:56 copying build/lib/gdcdictionary/schema_test.py -> build/bdist.linux-armv7l/wheel/gdcdictionary 2019-07-06T00:51:56 copying build/lib/gdcdictionary/__init__.py -> build/bdist.linux-armv7l/wheel/gdcdictionary 2019-07-06T00:51:56 running install_egg_info 2019-07-06T00:51:56 running egg_info 2019-07-06T00:51:56 writing requirements to gdcdictionary.egg-info/requires.txt 2019-07-06T00:51:56 writing dependency_links to gdcdictionary.egg-info/dependency_links.txt 2019-07-06T00:51:56 writing gdcdictionary.egg-info/PKG-INFO 2019-07-06T00:51:56 writing top-level names to gdcdictionary.egg-info/top_level.txt 2019-07-06T00:51:56 reading manifest file 'gdcdictionary.egg-info/SOURCES.txt' 2019-07-06T00:51:56 reading manifest template 'MANIFEST.in' 2019-07-06T00:51:56 warning: no files found matching 'Pipfile.lock' 2019-07-06T00:51:56 warning: no files found matching '*.yaml' under directory 'schemas/' 2019-07-06T00:51:56 writing manifest file 'gdcdictionary.egg-info/SOURCES.txt' 2019-07-06T00:51:56 Copying gdcdictionary.egg-info to build/bdist.linux-armv7l/wheel/gdcdictionary-1.2.0-py3.5.egg-info 2019-07-06T00:51:56 running install_scripts 2019-07-06T00:51:56 creating build/bdist.linux-armv7l/wheel/gdcdictionary-1.2.0.dist-info/WHEEL 2019-07-06T00:51:57 Building wheel for gdcdictionary (setup.py): finished with status 'done' 2019-07-06T00:51:57 Stored in directory: /tmp/tmp6tg0mfuo 2019-07-06T00:51:57 Successfully built gdcdictionary 2019-07-06T00:51:57 Cleaning up... 2019-07-06T00:51:57 Removing source in /tmp/pip-wheel-4xsfas8r/gdcdictionary 2019-07-06T00:51:57 Removed build tracker '/tmp/pip-req-tracker-luvo29dr'