2019-07-06T14:07:43 Created temporary directory: /tmp/pip-ephem-wheel-cache-gpjtsa3l 2019-07-06T14:07:43 Created temporary directory: /tmp/pip-req-tracker-gm76i1uj 2019-07-06T14:07:43 Created requirements tracker '/tmp/pip-req-tracker-gm76i1uj' 2019-07-06T14:07:43 Created temporary directory: /tmp/pip-wheel-fiyxidag 2019-07-06T14:07:43 Collecting oncodriveclustl==1.1.1 2019-07-06T14:07:43 1 location(s) to search for versions of oncodriveclustl: 2019-07-06T14:07:43 * https://pypi.org/simple/oncodriveclustl/ 2019-07-06T14:07:43 Getting page https://pypi.org/simple/oncodriveclustl/ 2019-07-06T14:07:43 Analyzing links from page https://pypi.org/simple/oncodriveclustl/ 2019-07-06T14:07:43 Found link https://files.pythonhosted.org/packages/c3/61/aab69961e3add8ec4cca3881595c2c28e9ac07de76955c28e48268cb88da/oncodriveclustl-1.0.0.tar.gz#sha256=d72f538f839b0d46be614778de60c1c23b70249ebe8930b2b2221cbcb6c05b7f (from https://pypi.org/simple/oncodriveclustl/) (requires-python:>=3.5), version: 1.0.0 2019-07-06T14:07:43 Found link https://files.pythonhosted.org/packages/c8/38/74de52a5d6f770270b677edd3cac87dc9a382ef55113dc756378ec8c82f8/oncodriveclustl-1.0.1.tar.gz#sha256=9a84dd06f37166e4884990bd787474d533cf7e3b2e2950c05ae2e14371445151 (from https://pypi.org/simple/oncodriveclustl/) (requires-python:>=3.5), version: 1.0.1 2019-07-06T14:07:43 Found link https://files.pythonhosted.org/packages/d9/ec/2921e6e59b85b0a01cdbfe81649dfa9e83b74a91a715842500853f49603c/oncodriveclustl-1.1.0.tar.gz#sha256=9d3f047851fda83b6df4a00267da308992d189efc454c2eb2d8e1e1b47f7759e (from https://pypi.org/simple/oncodriveclustl/) (requires-python:>=3.5), version: 1.1.0 2019-07-06T14:07:43 Found link https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz#sha256=5949d8d4278ca59c375fcabaac10ca41e19d1011da8ff82087df2414de3dad2e (from https://pypi.org/simple/oncodriveclustl/) (requires-python:>=3.5), version: 1.1.1 2019-07-06T14:07:43 Using version 1.1.1 (newest of versions: 1.1.1) 2019-07-06T14:07:43 Created temporary directory: /tmp/pip-unpack-mjff82ye 2019-07-06T14:07:44 Downloading https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz 2019-07-06T14:07:44 Downloading from URL https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz#sha256=5949d8d4278ca59c375fcabaac10ca41e19d1011da8ff82087df2414de3dad2e (from https://pypi.org/simple/oncodriveclustl/) (requires-python:>=3.5) 2019-07-06T14:07:44 Added oncodriveclustl==1.1.1 from https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz#sha256=5949d8d4278ca59c375fcabaac10ca41e19d1011da8ff82087df2414de3dad2e to build tracker '/tmp/pip-req-tracker-gm76i1uj' 2019-07-06T14:07:44 Running setup.py (path:/tmp/pip-wheel-fiyxidag/oncodriveclustl/setup.py) egg_info for package oncodriveclustl 2019-07-06T14:07:44 Running command python setup.py egg_info 2019-07-06T14:07:46 running egg_info 2019-07-06T14:07:46 creating pip-egg-info/oncodriveclustl.egg-info 2019-07-06T14:07:46 writing top-level names to pip-egg-info/oncodriveclustl.egg-info/top_level.txt 2019-07-06T14:07:46 writing pip-egg-info/oncodriveclustl.egg-info/PKG-INFO 2019-07-06T14:07:46 writing requirements to pip-egg-info/oncodriveclustl.egg-info/requires.txt 2019-07-06T14:07:46 writing entry points to pip-egg-info/oncodriveclustl.egg-info/entry_points.txt 2019-07-06T14:07:46 writing dependency_links to pip-egg-info/oncodriveclustl.egg-info/dependency_links.txt 2019-07-06T14:07:46 writing manifest file 'pip-egg-info/oncodriveclustl.egg-info/SOURCES.txt' 2019-07-06T14:07:46 reading manifest file 'pip-egg-info/oncodriveclustl.egg-info/SOURCES.txt' 2019-07-06T14:07:46 reading manifest template 'MANIFEST.in' 2019-07-06T14:07:46 warning: no files found matching 'data/*' 2019-07-06T14:07:46 writing manifest file 'pip-egg-info/oncodriveclustl.egg-info/SOURCES.txt' 2019-07-06T14:07:46 Source in /tmp/pip-wheel-fiyxidag/oncodriveclustl has version 1.1.1, which satisfies requirement oncodriveclustl==1.1.1 from https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz#sha256=5949d8d4278ca59c375fcabaac10ca41e19d1011da8ff82087df2414de3dad2e 2019-07-06T14:07:46 Removed oncodriveclustl==1.1.1 from https://files.pythonhosted.org/packages/2c/ef/567a5f794b39a0e2cd8161558e7df2420caea2d120d9b96391f9c17acb9b/oncodriveclustl-1.1.1.tar.gz#sha256=5949d8d4278ca59c375fcabaac10ca41e19d1011da8ff82087df2414de3dad2e from build tracker '/tmp/pip-req-tracker-gm76i1uj' 2019-07-06T14:07:46 Building wheels for collected packages: oncodriveclustl 2019-07-06T14:07:46 Created temporary directory: /tmp/pip-wheel-hylvyq2x 2019-07-06T14:07:46 Building wheel for oncodriveclustl (setup.py): started 2019-07-06T14:07:46 Destination directory: /tmp/pip-wheel-hylvyq2x 2019-07-06T14:07:46 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-fiyxidag/oncodriveclustl/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hylvyq2x 2019-07-06T14:07:48 running bdist_wheel 2019-07-06T14:07:48 running build 2019-07-06T14:07:48 running build_py 2019-07-06T14:07:49 creating build 2019-07-06T14:07:49 creating build/lib 2019-07-06T14:07:49 creating build/lib/oncodriveclustl 2019-07-06T14:07:49 copying oncodriveclustl/main.py -> build/lib/oncodriveclustl 2019-07-06T14:07:49 copying oncodriveclustl/__init__.py -> build/lib/oncodriveclustl 2019-07-06T14:07:49 creating build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/exceptions.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/__init__.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/run.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/analyticalpval.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/postprocessing.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/clustering.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/parsing.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/qq_plot.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/smoothing.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/cluster_plot.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 copying oncodriveclustl/utils/score.py -> build/lib/oncodriveclustl/utils 2019-07-06T14:07:49 creating build/lib/oncodriveclustl/parsers 2019-07-06T14:07:49 copying oncodriveclustl/parsers/__init__.py -> build/lib/oncodriveclustl/parsers 2019-07-06T14:07:49 copying oncodriveclustl/parsers/vcf.py -> build/lib/oncodriveclustl/parsers 2019-07-06T14:07:49 creating build/lib/oncodriveclustl/data 2019-07-06T14:07:49 copying oncodriveclustl/data/CGC_all_Oct15_10_29_09_2018.tsv -> build/lib/oncodriveclustl/data 2019-07-06T14:07:49 installing to build/bdist.linux-armv7l/wheel 2019-07-06T14:07:49 running install 2019-07-06T14:07:49 running install_lib 2019-07-06T14:07:49 creating build/bdist.linux-armv7l 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel/oncodriveclustl 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel/oncodriveclustl/data 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/data/CGC_all_Oct15_10_29_09_2018.tsv -> build/bdist.linux-armv7l/wheel/oncodriveclustl/data 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/main.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/__init__.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/exceptions.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/__init__.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/run.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/analyticalpval.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/postprocessing.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/clustering.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/parsing.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/qq_plot.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/smoothing.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/cluster_plot.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/utils/score.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/utils 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel/oncodriveclustl/parsers 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/parsers 2019-07-06T14:07:49 copying build/lib/oncodriveclustl/parsers/vcf.py -> build/bdist.linux-armv7l/wheel/oncodriveclustl/parsers 2019-07-06T14:07:49 running install_egg_info 2019-07-06T14:07:49 running egg_info 2019-07-06T14:07:49 writing oncodriveclustl.egg-info/PKG-INFO 2019-07-06T14:07:49 writing top-level names to oncodriveclustl.egg-info/top_level.txt 2019-07-06T14:07:49 writing requirements to oncodriveclustl.egg-info/requires.txt 2019-07-06T14:07:49 writing entry points to oncodriveclustl.egg-info/entry_points.txt 2019-07-06T14:07:49 writing dependency_links to oncodriveclustl.egg-info/dependency_links.txt 2019-07-06T14:07:49 reading manifest file 'oncodriveclustl.egg-info/SOURCES.txt' 2019-07-06T14:07:49 reading manifest template 'MANIFEST.in' 2019-07-06T14:07:49 warning: no files found matching 'data/*' 2019-07-06T14:07:49 writing manifest file 'oncodriveclustl.egg-info/SOURCES.txt' 2019-07-06T14:07:49 Copying oncodriveclustl.egg-info to build/bdist.linux-armv7l/wheel/oncodriveclustl-1.1.1-py3.5.egg-info 2019-07-06T14:07:49 running install_scripts 2019-07-06T14:07:49 creating build/bdist.linux-armv7l/wheel/oncodriveclustl-1.1.1.dist-info/WHEEL 2019-07-06T14:07:50 Building wheel for oncodriveclustl (setup.py): finished with status 'done' 2019-07-06T14:07:50 Stored in directory: /tmp/tmp20ehz614 2019-07-06T14:07:50 Successfully built oncodriveclustl 2019-07-06T14:07:50 Cleaning up... 2019-07-06T14:07:50 Removing source in /tmp/pip-wheel-fiyxidag/oncodriveclustl 2019-07-06T14:07:50 Removed build tracker '/tmp/pip-req-tracker-gm76i1uj'