2019-07-06T21:11:43 Created temporary directory: /tmp/pip-ephem-wheel-cache-_trvd24t
2019-07-06T21:11:43 Created temporary directory: /tmp/pip-req-tracker-7fy5wsbs
2019-07-06T21:11:43 Created requirements tracker '/tmp/pip-req-tracker-7fy5wsbs'
2019-07-06T21:11:43 Created temporary directory: /tmp/pip-wheel-3usz9c2v
2019-07-06T21:11:43 Collecting pyproteins==1.4
2019-07-06T21:11:43   1 location(s) to search for versions of pyproteins:
2019-07-06T21:11:43   * https://pypi.org/simple/pyproteins/
2019-07-06T21:11:43   Getting page https://pypi.org/simple/pyproteins/
2019-07-06T21:11:43   Analyzing links from page https://pypi.org/simple/pyproteins/
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/bc/6a/77fd4446c407ce7485c99a4b3b1f93ce93f93bc6c47bf31a7569efdbde28/pyproteins-0.8.tar.gz#sha256=4d0fd91e1f18d66e8a0ffb5f4ef7a48b20cc8e2624161a3e6c913177b3707307 (from https://pypi.org/simple/pyproteins/), version: 0.8
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/ec/ce/6ee432f4e53c609a7c336daab0021af9d00e61774ab9b376036d78942313/pyproteins-0.9.tar.gz#sha256=9d7ee67d3aca0f81c974b9994deb895435c26380c675e7925a80abe729df3119 (from https://pypi.org/simple/pyproteins/), version: 0.9
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/b4/44/b139c96bf14532f5ca3ba650f36db2c78d259c1417c64872db12b7ba2f17/pyproteins-0.81.tar.gz#sha256=66b0f5f3ceabfb069d7ae4701242e8d034da302057f8f92afe68297f1a300445 (from https://pypi.org/simple/pyproteins/), version: 0.81
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/db/8f/14d30dc536a8e038a8c3b45a9559819d89cba38945eba69b0ae5f769ae62/pyproteins-0.82.tar.gz#sha256=ba393a83ba8eb21d1d7ab073ee0a73616bc5b26541a1b630809daed46d8e446b (from https://pypi.org/simple/pyproteins/), version: 0.82
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/9b/ab/2bfe26af02d80883481d64b11c17f0707c5a3ef7f198000a7e651aa13f0e/pyproteins-0.91.tar.gz#sha256=c987d09080b6cd125a197c36acf5cbc6aff1647128f8f5a8ede6e04be6795f2b (from https://pypi.org/simple/pyproteins/), version: 0.91
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/91/43/3c7b18b5f1ecc286fdfda67181f84e9bdb7b4dbe486487f77a6907e484a7/pyproteins-0.92.tar.gz#sha256=6545e796b8a0f3455934953bc0b08ea5d5aedaa18d780decf4981fb4ccd1f705 (from https://pypi.org/simple/pyproteins/), version: 0.92
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/d1/76/8f98ff0c22be2765cd9698c5d7ac7fdedff4dbba8ef882b076a80f6fe4c0/pyproteins-0.93.tar.gz#sha256=9e30dc7d0136223cb8aa0bd2865d058c457f2e8148e5613d4bc3eac5c458b2c4 (from https://pypi.org/simple/pyproteins/), version: 0.93
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/d1/19/fc325338da394afdee9aa547942a0fbd7451ade178b9ee1dbcc9d3b67b1b/pyproteins-0.94.tar.gz#sha256=749b77aeaf950593ec8c6680f3097fa688df24b00551ca21a2d74726a5259481 (from https://pypi.org/simple/pyproteins/), version: 0.94
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/cf/85/d05f87f89bce205111fbb56b89e54c016a6fbf886e58a67c5d0e4e4d4d3f/pyproteins-0.95.tar.gz#sha256=890f71dafe366ebdb56d399d519e0fe97e8a433ad4ad4d639c3f5a6ea8f69c11 (from https://pypi.org/simple/pyproteins/), version: 0.95
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/fc/2f/0adc50eaeda75c62b4ba2f7d12dd8c8001f76f296ce5769b9e102f045288/pyproteins-0.96.tar.gz#sha256=6a6171ec73c6d1d2b38f7b2bcfa2f32f8b02424f37c094ece0220b2fcadaaf5f (from https://pypi.org/simple/pyproteins/), version: 0.96
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/e9/c7/5d435e76a438d1b8206b10a117c289d4a7b851d686a9addca7bf6da62fd9/pyproteins-1.0.tar.gz#sha256=4585d832a6fa53384bd026ba45aaf0acbb17474d530c3edc9f67d85bbfe88d26 (from https://pypi.org/simple/pyproteins/), version: 1.0
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/c8/53/45203a629f104f89bd8da3e8c553c3809a444ff94b157a1b58779fcc5b19/pyproteins-1.1.tar.gz#sha256=8e84647f6bfdc0443e17be8da1c06f83b3208bf62cf8c4f13599d0d8601c1838 (from https://pypi.org/simple/pyproteins/), version: 1.1
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/c7/c1/8b0b43dc198f5b4f4a78768d0e00495cf40def8b5a81c88f9e8ca79f702e/pyproteins-1.2.tar.gz#sha256=1f506eca411ad1814f19feeb89fc2d10a52b373aa5cb3c430488a1e0b61d6e1b (from https://pypi.org/simple/pyproteins/), version: 1.2
2019-07-06T21:11:43     Found link https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz#sha256=015cc0adad3f0fb55e5574fac586da7ce0ea84a87efdbe79e4c9c760bfc853d3 (from https://pypi.org/simple/pyproteins/), version: 1.4
2019-07-06T21:11:43   Using version 1.4 (newest of versions: 1.4)
2019-07-06T21:11:43   Created temporary directory: /tmp/pip-unpack-lw7g33og
2019-07-06T21:11:43   Downloading https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz
2019-07-06T21:11:43   Downloading from URL https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz#sha256=015cc0adad3f0fb55e5574fac586da7ce0ea84a87efdbe79e4c9c760bfc853d3 (from https://pypi.org/simple/pyproteins/)
2019-07-06T21:11:43   Added pyproteins==1.4 from https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz#sha256=015cc0adad3f0fb55e5574fac586da7ce0ea84a87efdbe79e4c9c760bfc853d3 to build tracker '/tmp/pip-req-tracker-7fy5wsbs'
2019-07-06T21:11:43     Running setup.py (path:/tmp/pip-wheel-3usz9c2v/pyproteins/setup.py) egg_info for package pyproteins
2019-07-06T21:11:43     Running command python setup.py egg_info
2019-07-06T21:11:45     running egg_info
2019-07-06T21:11:45     creating pip-egg-info/pyproteins.egg-info
2019-07-06T21:11:45     writing dependency_links to pip-egg-info/pyproteins.egg-info/dependency_links.txt
2019-07-06T21:11:45     writing top-level names to pip-egg-info/pyproteins.egg-info/top_level.txt
2019-07-06T21:11:45     writing requirements to pip-egg-info/pyproteins.egg-info/requires.txt
2019-07-06T21:11:45     writing pip-egg-info/pyproteins.egg-info/PKG-INFO
2019-07-06T21:11:45     writing manifest file 'pip-egg-info/pyproteins.egg-info/SOURCES.txt'
2019-07-06T21:11:45     reading manifest file 'pip-egg-info/pyproteins.egg-info/SOURCES.txt'
2019-07-06T21:11:45     reading manifest template 'MANIFEST.in'
2019-07-06T21:11:45     warning: no directories found matching 'src/pyproteins/external'
2019-07-06T21:11:45     warning: no directories found matching 'src/pyproteins/bin'
2019-07-06T21:11:45     warning: no directories found matching 'src/pyproteins/conf'
2019-07-06T21:11:45     warning: no previously-included files found matching '.*'
2019-07-06T21:11:45     writing manifest file 'pip-egg-info/pyproteins.egg-info/SOURCES.txt'
2019-07-06T21:11:46   Source in /tmp/pip-wheel-3usz9c2v/pyproteins has version 1.4, which satisfies requirement pyproteins==1.4 from https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz#sha256=015cc0adad3f0fb55e5574fac586da7ce0ea84a87efdbe79e4c9c760bfc853d3
2019-07-06T21:11:46   Removed pyproteins==1.4 from https://files.pythonhosted.org/packages/35/6c/fe51df2c74651f209acc58bc5274e213e7dd6494afbb1f49b1e6db1627b0/pyproteins-1.4.tar.gz#sha256=015cc0adad3f0fb55e5574fac586da7ce0ea84a87efdbe79e4c9c760bfc853d3 from build tracker '/tmp/pip-req-tracker-7fy5wsbs'
2019-07-06T21:11:46 Building wheels for collected packages: pyproteins
2019-07-06T21:11:46   Created temporary directory: /tmp/pip-wheel-m3erszbf
2019-07-06T21:11:46   Building wheel for pyproteins (setup.py): started
2019-07-06T21:11:46   Destination directory: /tmp/pip-wheel-m3erszbf
2019-07-06T21:11:46   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-3usz9c2v/pyproteins/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-m3erszbf
2019-07-06T21:11:47   running bdist_wheel
2019-07-06T21:11:47   running build
2019-07-06T21:11:47   running build_py
2019-07-06T21:11:47   creating build
2019-07-06T21:11:47   creating build/lib
2019-07-06T21:11:47   creating build/lib/pyproteins
2019-07-06T21:11:47   copying src/pyproteins/__init__.py -> build/lib/pyproteins
2019-07-06T21:11:47   creating build/lib/pyproteins/alignment
2019-07-06T21:11:47   copying src/pyproteins/alignment/scoringMatrix.py -> build/lib/pyproteins/alignment
2019-07-06T21:11:47   copying src/pyproteins/alignment/nw_custom.py -> build/lib/pyproteins/alignment
2019-07-06T21:11:47   copying src/pyproteins/alignment/__init__.py -> build/lib/pyproteins/alignment
2019-07-06T21:11:47   copying src/pyproteins/alignment/scoringFunctions.py -> build/lib/pyproteins/alignment
2019-07-06T21:11:47   creating build/lib/pyproteins/container
2019-07-06T21:11:47   copying src/pyproteins/container/customCollection.py -> build/lib/pyproteins/container
2019-07-06T21:11:47   copying src/pyproteins/container/__init__.py -> build/lib/pyproteins/container
2019-07-06T21:11:47   copying src/pyproteins/container/Core.py -> build/lib/pyproteins/container
2019-07-06T21:11:47   creating build/lib/pyproteins/sequence
2019-07-06T21:11:47   copying src/pyproteins/sequence/peptide.py -> build/lib/pyproteins/sequence
2019-07-06T21:11:47   copying src/pyproteins/sequence/psipred.py -> build/lib/pyproteins/sequence
2019-07-06T21:11:47   copying src/pyproteins/sequence/__init__.py -> build/lib/pyproteins/sequence
2019-07-06T21:11:47   copying src/pyproteins/sequence/msa.py -> build/lib/pyproteins/sequence
2019-07-06T21:11:47   creating build/lib/pyproteins/utils
2019-07-06T21:11:47   copying src/pyproteins/utils/unixCmd.py -> build/lib/pyproteins/utils
2019-07-06T21:11:48   copying src/pyproteins/utils/miscellaneous.py -> build/lib/pyproteins/utils
2019-07-06T21:11:48   copying src/pyproteins/utils/make_json_serializable.py -> build/lib/pyproteins/utils
2019-07-06T21:11:48   copying src/pyproteins/utils/__init__.py -> build/lib/pyproteins/utils
2019-07-06T21:11:48   copying src/pyproteins/utils/tsv.py -> build/lib/pyproteins/utils
2019-07-06T21:11:48   running egg_info
2019-07-06T21:11:48   writing dependency_links to src/pyproteins.egg-info/dependency_links.txt
2019-07-06T21:11:48   writing top-level names to src/pyproteins.egg-info/top_level.txt
2019-07-06T21:11:48   writing requirements to src/pyproteins.egg-info/requires.txt
2019-07-06T21:11:48   writing src/pyproteins.egg-info/PKG-INFO
2019-07-06T21:11:48   reading manifest file 'src/pyproteins.egg-info/SOURCES.txt'
2019-07-06T21:11:48   reading manifest template 'MANIFEST.in'
2019-07-06T21:11:48   warning: no directories found matching 'src/pyproteins/external'
2019-07-06T21:11:48   warning: no directories found matching 'src/pyproteins/bin'
2019-07-06T21:11:48   warning: no directories found matching 'src/pyproteins/conf'
2019-07-06T21:11:48   warning: no previously-included files found matching '.*'
2019-07-06T21:11:48   writing manifest file 'src/pyproteins.egg-info/SOURCES.txt'
2019-07-06T21:11:48   installing to build/bdist.linux-armv7l/wheel
2019-07-06T21:11:48   running install
2019-07-06T21:11:48   running install_lib
2019-07-06T21:11:48   creating build/bdist.linux-armv7l
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins/alignment
2019-07-06T21:11:48   copying build/lib/pyproteins/alignment/scoringMatrix.py -> build/bdist.linux-armv7l/wheel/pyproteins/alignment
2019-07-06T21:11:48   copying build/lib/pyproteins/alignment/nw_custom.py -> build/bdist.linux-armv7l/wheel/pyproteins/alignment
2019-07-06T21:11:48   copying build/lib/pyproteins/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/pyproteins/alignment
2019-07-06T21:11:48   copying build/lib/pyproteins/alignment/scoringFunctions.py -> build/bdist.linux-armv7l/wheel/pyproteins/alignment
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins/container
2019-07-06T21:11:48   copying build/lib/pyproteins/container/customCollection.py -> build/bdist.linux-armv7l/wheel/pyproteins/container
2019-07-06T21:11:48   copying build/lib/pyproteins/container/__init__.py -> build/bdist.linux-armv7l/wheel/pyproteins/container
2019-07-06T21:11:48   copying build/lib/pyproteins/container/Core.py -> build/bdist.linux-armv7l/wheel/pyproteins/container
2019-07-06T21:11:48   copying build/lib/pyproteins/__init__.py -> build/bdist.linux-armv7l/wheel/pyproteins
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins/sequence
2019-07-06T21:11:48   copying build/lib/pyproteins/sequence/peptide.py -> build/bdist.linux-armv7l/wheel/pyproteins/sequence
2019-07-06T21:11:48   copying build/lib/pyproteins/sequence/psipred.py -> build/bdist.linux-armv7l/wheel/pyproteins/sequence
2019-07-06T21:11:48   copying build/lib/pyproteins/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/pyproteins/sequence
2019-07-06T21:11:48   copying build/lib/pyproteins/sequence/msa.py -> build/bdist.linux-armv7l/wheel/pyproteins/sequence
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   copying build/lib/pyproteins/utils/unixCmd.py -> build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   copying build/lib/pyproteins/utils/miscellaneous.py -> build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   copying build/lib/pyproteins/utils/make_json_serializable.py -> build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   copying build/lib/pyproteins/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   copying build/lib/pyproteins/utils/tsv.py -> build/bdist.linux-armv7l/wheel/pyproteins/utils
2019-07-06T21:11:48   running install_egg_info
2019-07-06T21:11:48   Copying src/pyproteins.egg-info to build/bdist.linux-armv7l/wheel/pyproteins-1.4-py3.5.egg-info
2019-07-06T21:11:48   running install_scripts
2019-07-06T21:11:48   creating build/bdist.linux-armv7l/wheel/pyproteins-1.4.dist-info/WHEEL
2019-07-06T21:11:48   Building wheel for pyproteins (setup.py): finished with status 'done'
2019-07-06T21:11:48   Stored in directory: /tmp/tmp6bbktf1l
2019-07-06T21:11:48 Successfully built pyproteins
2019-07-06T21:11:48 Cleaning up...
2019-07-06T21:11:48   Removing source in /tmp/pip-wheel-3usz9c2v/pyproteins
2019-07-06T21:11:48 Removed build tracker '/tmp/pip-req-tracker-7fy5wsbs'