2019-07-09T00:27:09 Created temporary directory: /tmp/pip-ephem-wheel-cache-jsfcgo4p
2019-07-09T00:27:09 Created temporary directory: /tmp/pip-req-tracker-jp5vt5p2
2019-07-09T00:27:09 Created requirements tracker '/tmp/pip-req-tracker-jp5vt5p2'
2019-07-09T00:27:09 Created temporary directory: /tmp/pip-wheel-72glpwq1
2019-07-09T00:27:09 Collecting pysb==1.9.1
2019-07-09T00:27:09   1 location(s) to search for versions of pysb:
2019-07-09T00:27:09   * https://pypi.org/simple/pysb/
2019-07-09T00:27:09   Getting page https://pypi.org/simple/pysb/
2019-07-09T00:27:09   Analyzing links from page https://pypi.org/simple/pysb/
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/d0/95/38ec0bb8707d5914457261dc26509c2be7ae99f5816a40c5a15994f99b2a/pysb-0.1.3.tar.gz#sha256=c9d6cba3f8b45c93ffcc3f00a603fb450f5fc4a7486c8f25e5a2e250459cd2ff (from https://pypi.org/simple/pysb/), version: 0.1.3
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/dd/c6/3e5c8f0d7d6e48b0d6f4e84b0bfa910ad809ced993db7863e23626f0eb9a/pysb-0.1.4.tar.gz#sha256=0abf3e9b8c38868e4e1f3a4641e52ca5f81546144893efbccf0054b410968af9 (from https://pypi.org/simple/pysb/), version: 0.1.4
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/90/43/150ebafa3b881f53061326d043c1f8bbabd051f13b2beea8d54e79ff8f16/pysb-0.1.5.tar.gz#sha256=22a88c00ff1e17c3089079c0cc6edb8bce02550a57540e2ebdfd007037039c43 (from https://pypi.org/simple/pysb/), version: 0.1.5
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/ad/57/6ff9ac8b5efaf6517aae862597d8ca59c16430e3aed13780a477662175ba/pysb-0.1.6.tar.gz#sha256=f41185b0238e0dcf66fd6e565a921fdc82770b3f60e62209ede04e03fe592806 (from https://pypi.org/simple/pysb/), version: 0.1.6
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/97/47/d4096b6b84ff6666bab62b8bfb2f05e7a63684fb8917cee69e2963ae3c5d/pysb-0.1.7.tar.gz#sha256=9251f0da12d4761b2d8bceabbcdb2cc4763f06317f6222aa9720ba49d11441ee (from https://pypi.org/simple/pysb/), version: 0.1.7
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/83/2c/7b9f4ee2fc8d42a3f3eee88f3c3f27c2d78acd4caaecc736c6298cf9e477/pysb-0.1.8.tar.gz#sha256=7c98c437a05282dc7a0c66e6696a938d849cd32d2fac3c4938503997ebb346ee (from https://pypi.org/simple/pysb/), version: 0.1.8
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/69/77/3db9d2401466092097b4f66c1b5c643d7e38df6d32e49b19647c57168b61/pysb-0.1.9.tar.gz#sha256=89e8efda97a6decb1525fbf5445439510a0b01d1cd16e296662159abc5e3ca9b (from https://pypi.org/simple/pysb/), version: 0.1.9
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/2d/d4/043c122f4351366973bc0958a6bafb224bfd6df7d84622adda95b100bebe/pysb-0.1.10.tar.gz#sha256=44ec0c69acfd756f26e7de07eb890b964744b82ee8be6264a600dbf0aded33de (from https://pypi.org/simple/pysb/), version: 0.1.10
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/2b/ff/7faaf379a3721f7ee39faec94fc78c2406f825cc738ef8e60cbe3fe192cb/pysb-0.1.11.tar.gz#sha256=3af0a2d37d0dde81b2479c03e3d0cb6c4c0b439559c0ae2552e2507c044dc3fd (from https://pypi.org/simple/pysb/), version: 0.1.11
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/88/cc/1cf17b0c5c3e679b26b0cd7927c2d45e9272ee91a69b84125af1e57f0e18/pysb-1.0.0.tar.gz#sha256=6987a39e26227e7ac987995fa1bdd01f906e162ce8f8750499ae546c557e1214 (from https://pypi.org/simple/pysb/), version: 1.0.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/ce/52/2d372671a6b24c981d2c55efa2ad6e7ba2f7ad59317ae58b1a65b7596dfd/pysb-1.0.1.tar.gz#sha256=118d2c947b245f0c5b9f3e85a59bb4b613059325b6d5fb44ea1565b74a3b748f (from https://pypi.org/simple/pysb/), version: 1.0.1
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/16/c9/7bd74e99c3ddb317307c4871d974f252c5b5de339a09f47e53a9116bd9dc/pysb-1.1.0.tar.gz#sha256=3a0aaf81425318bb4e8ab01c6d2699f4e3fe730df4bd8c258772604cbdba3dcd (from https://pypi.org/simple/pysb/), version: 1.1.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/4e/6a/39ceadc46d09cc2b2a42a5ef7cd65bc8d535ade2492efc8338a4e6ae5fdb/pysb-1.1.1.tar.gz#sha256=03d96784c558f557e9ec1f9d006670c6ce6a28f92e5724e75143e328426fb153 (from https://pypi.org/simple/pysb/), version: 1.1.1
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/ac/ce/f692a3683e7d2ba99bc29f0491490684f6ffdb2358fac969fb162268a1fe/pysb-1.2.0.tar.gz#sha256=625d7b26072e15f122daca4eec283ef74df5c18ca5b431d89ef5479ef5cd9a69 (from https://pypi.org/simple/pysb/), version: 1.2.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/da/91/9546968cfc9e53c0e52a06602299b56fe05f69cee890c6497991d4d8d0e9/pysb-1.2.1.tar.gz#sha256=09a92fbc47ca93952d186c7d58b993df8173bc853e17ff7895eada18d3bf14b9 (from https://pypi.org/simple/pysb/), version: 1.2.1
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/52/53/3e174e8c7ea81409e342b06b126ade799840051c2f674358ebe8caafb8ba/pysb-1.2.2.tar.gz#sha256=79b6a9158a6ec74e0f4f0d508851ac4021222ee386c014e5a4bb38c1f0fae7b8 (from https://pypi.org/simple/pysb/), version: 1.2.2
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/93/03/403b0e4e634002dc41ac761abca340c66b4ddf1f309fc164504a1b7e6e48/pysb-1.3.0.tar.gz#sha256=e255271d762691c718806d602e7b7b619872c90288eacdc224b58710a0fc8a7b (from https://pypi.org/simple/pysb/), version: 1.3.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/cc/fd/5af895669c3e361d06050293c2be3815dc41524a8ff79f90f36717c6c7c0/pysb-1.4.0.tar.gz#sha256=dd65a6fa20a192214247d3248a725ccb37139dabbac22707624ceab988a31ce5 (from https://pypi.org/simple/pysb/), version: 1.4.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/bb/b0/af7e573adcfbafb37cd73ba98fad73b9c1838bd00421697df68ca2486cc2/pysb-1.5.0.tar.gz#sha256=5aa49d5019af317cd29d3462a9f305e7f1b1137347f53a64cb79e98a98c12f6e (from https://pypi.org/simple/pysb/), version: 1.5.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/10/fb/a52b99ec02064d7f7a560dab813c5ac318e96ee9dbe10bc1f954d8968436/pysb-1.6.0.tar.gz#sha256=cbe4e0eac66bd9097554b85d1d7d2a10e3031e4a1faaddb9d222708f609c82cf (from https://pypi.org/simple/pysb/), version: 1.6.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/a4/82/5b9739400888d4bdd760ccc696fbb1f6a01e1e34eb3521c4e6dcc9c194c4/pysb-1.7.0.tar.gz#sha256=4ddbc93b15783ba62c62ff2e16141ee3b57082d95df9c7aa2879924308da707d (from https://pypi.org/simple/pysb/), version: 1.7.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/c5/e7/4796b8017dca3c5e9526715585da8cef9f8870e8a48cca68e35eec39c9ed/pysb-1.8.0.tar.gz#sha256=e5123775c18e8b68233cb3df89b6f99456373feb66028fd72fbe72a1283c6350 (from https://pypi.org/simple/pysb/), version: 1.8.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/67/a8/dd3133119bc06bd09860c3e61155f20252dd5d9bd6677e70756d4c878277/pysb-1.8.1.tar.gz#sha256=e62f4ea8d49535913dfb855df78ea8d2366673f5fe500691f605315ed32f08ff (from https://pypi.org/simple/pysb/), version: 1.8.1
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/80/b5/1a079af59e6d36a31127fb50332726e60ee0a1736d389ea722c56bfd4dbe/pysb-1.9.0.tar.gz#sha256=c613d196dc1b7a01a03229f915e3e5870dbd818c903149bce451f01522bfdd27 (from https://pypi.org/simple/pysb/), version: 1.9.0
2019-07-09T00:27:09     Found link https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb (from https://pypi.org/simple/pysb/), version: 1.9.1
2019-07-09T00:27:09   Using version 1.9.1 (newest of versions: 1.9.1)
2019-07-09T00:27:09   Created temporary directory: /tmp/pip-unpack-thcgiuc8
2019-07-09T00:27:10   Downloading https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz (338kB)
2019-07-09T00:27:10   Downloading from URL https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb (from https://pypi.org/simple/pysb/)
2019-07-09T00:27:10   Added pysb==1.9.1 from https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb to build tracker '/tmp/pip-req-tracker-jp5vt5p2'
2019-07-09T00:27:10     Running setup.py (path:/tmp/pip-wheel-72glpwq1/pysb/setup.py) egg_info for package pysb
2019-07-09T00:27:10     Running command python setup.py egg_info
2019-07-09T00:27:14     running egg_info
2019-07-09T00:27:14     creating pip-egg-info/pysb.egg-info
2019-07-09T00:27:14     writing pip-egg-info/pysb.egg-info/PKG-INFO
2019-07-09T00:27:14     writing top-level names to pip-egg-info/pysb.egg-info/top_level.txt
2019-07-09T00:27:14     writing requirements to pip-egg-info/pysb.egg-info/requires.txt
2019-07-09T00:27:14     writing dependency_links to pip-egg-info/pysb.egg-info/dependency_links.txt
2019-07-09T00:27:14     writing manifest file 'pip-egg-info/pysb.egg-info/SOURCES.txt'
2019-07-09T00:27:14     reading manifest file 'pip-egg-info/pysb.egg-info/SOURCES.txt'
2019-07-09T00:27:14     reading manifest template 'MANIFEST.in'
2019-07-09T00:27:14     no previously-included directories found matching 'doc/_build'
2019-07-09T00:27:14     writing manifest file 'pip-egg-info/pysb.egg-info/SOURCES.txt'
2019-07-09T00:27:14   Source in /tmp/pip-wheel-72glpwq1/pysb has version 1.9.1, which satisfies requirement pysb==1.9.1 from https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb
2019-07-09T00:27:14   Removed pysb==1.9.1 from https://files.pythonhosted.org/packages/ca/a2/7d42b33ade5060268a2938afc257dfb8034ff49322857c4ecce13a16dd60/pysb-1.9.1.tar.gz#sha256=2c3c51a8b3a0ce6ea771f761bc9fb366e9c9fe9860e90cc49e34e12a615956bb from build tracker '/tmp/pip-req-tracker-jp5vt5p2'
2019-07-09T00:27:14 Building wheels for collected packages: pysb
2019-07-09T00:27:14   Created temporary directory: /tmp/pip-wheel-ylih8lsv
2019-07-09T00:27:14   Building wheel for pysb (setup.py): started
2019-07-09T00:27:14   Destination directory: /tmp/pip-wheel-ylih8lsv
2019-07-09T00:27:14   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-72glpwq1/pysb/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ylih8lsv
2019-07-09T00:27:18   running bdist_wheel
2019-07-09T00:27:18   running build
2019-07-09T00:27:18   running build_py
2019-07-09T00:27:18   creating build
2019-07-09T00:27:18   creating build/lib
2019-07-09T00:27:18   creating build/lib/pysb
2019-07-09T00:27:18   copying pysb/kappa.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/_version.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/annotation.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/builder.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/merge.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/macros.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/jacobian.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/integrate.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/pathfinder.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/logging.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/util.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/core.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/anneal_mod.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/bng.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/pattern.py -> build/lib/pysb
2019-07-09T00:27:18   copying pysb/__init__.py -> build/lib/pysb
2019-07-09T00:27:18   creating build/lib/pysb/generator
2019-07-09T00:27:18   copying pysb/generator/kappa.py -> build/lib/pysb/generator
2019-07-09T00:27:18   copying pysb/generator/bng.py -> build/lib/pysb/generator
2019-07-09T00:27:18   copying pysb/generator/__init__.py -> build/lib/pysb/generator
2019-07-09T00:27:18   creating build/lib/pysb/importers
2019-07-09T00:27:18   copying pysb/importers/bngl.py -> build/lib/pysb/importers
2019-07-09T00:27:18   copying pysb/importers/kappa.py -> build/lib/pysb/importers
2019-07-09T00:27:18   copying pysb/importers/sbml.py -> build/lib/pysb/importers
2019-07-09T00:27:18   copying pysb/importers/__init__.py -> build/lib/pysb/importers
2019-07-09T00:27:18   creating build/lib/pysb/tools
2019-07-09T00:27:18   copying pysb/tools/species_graph.py -> build/lib/pysb/tools
2019-07-09T00:27:18   copying pysb/tools/sensitivity_analysis.py -> build/lib/pysb/tools
2019-07-09T00:27:18   copying pysb/tools/render_species.py -> build/lib/pysb/tools
2019-07-09T00:27:18   copying pysb/tools/render_reactions.py -> build/lib/pysb/tools
2019-07-09T00:27:18   copying pysb/tools/__init__.py -> build/lib/pysb/tools
2019-07-09T00:27:18   creating build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/bngwiki_egfr_simple.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_earm_1_0.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/move_connected.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_tyson_oscillator_stochkit.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/earm_1_0.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/tutorial_c.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/tutorial_a.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_bax_pore_sequential.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_bax_pore.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/kinase_cascade.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/fixed_initial.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/robertson.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/earm_1_3.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/expression_observables.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/explicit.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/fricker_2010_apoptosis.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_tutorial_a.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/synth_deg.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/bax_pore_sequential.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/bngwiki_enzymatic_cycle_mm.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_bng_ssa_example.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/bngwiki_simple.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_tyson_oscillator.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/tutorial_b.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/tyson_oscillator.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_fixed_initial.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/michment.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_robertson.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/hello_pysb.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_earm_hpp.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_michment.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_earm_stochkit.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/__init__.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/run_kinase_cascade.py -> build/lib/pysb/examples
2019-07-09T00:27:18   copying pysb/examples/bax_pore.py -> build/lib/pysb/examples
2019-07-09T00:27:18   creating build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/bngl.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/stochkit.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/kappa.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/mathematica.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/__main__.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/matlab.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/potterswheel.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/bng_net.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/pysb_flat.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/sbml.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/python.py -> build/lib/pysb/export
2019-07-09T00:27:18   copying pysb/export/__init__.py -> build/lib/pysb/export
2019-07-09T00:27:18   creating build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/stochkit.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/base.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/cupsoda.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/scipyode.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/bng.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   copying pysb/simulator/__init__.py -> build/lib/pysb/simulator
2019-07-09T00:27:18   creating build/lib/pysb/testing
2019-07-09T00:27:18   copying pysb/testing/modeltests.py -> build/lib/pysb/testing
2019-07-09T00:27:18   copying pysb/testing/__init__.py -> build/lib/pysb/testing
2019-07-09T00:27:18   creating build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_integrate.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_macros.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_pattern.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_core.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_bng.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_importers.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/jacobian_runtimes.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_simulator_cupsoda.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_merge.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_simulator_bng.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_simulationresult.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_util.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_exporters.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_importer_kappa.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_simulator_stochkit.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_kappa.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_expressions.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_sensitivity_analysis.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_simulator_scipy.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/__init__.py -> build/lib/pysb/tests
2019-07-09T00:27:18   copying pysb/tests/test_examples.py -> build/lib/pysb/tests
2019-07-09T00:27:18   UPDATING build/lib/pysb/_version.py
2019-07-09T00:27:18   set build/lib/pysb/_version.py to '1.9.1'
2019-07-09T00:27:18   running build_scripts
2019-07-09T00:27:18   creating build/scripts-3.5
2019-07-09T00:27:18   copying and adjusting scripts/pysb_export -> build/scripts-3.5
2019-07-09T00:27:18   changing mode of build/scripts-3.5/pysb_export from 644 to 755
2019-07-09T00:27:18   installing to build/bdist.linux-armv7l/wheel
2019-07-09T00:27:18   running install
2019-07-09T00:27:18   running install_lib
2019-07-09T00:27:18   creating build/bdist.linux-armv7l
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/kappa.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/bngwiki_egfr_simple.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_earm_1_0.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/move_connected.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_tyson_oscillator_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/earm_1_0.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/tutorial_c.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/tutorial_a.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_bax_pore_sequential.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_bax_pore.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/kinase_cascade.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/fixed_initial.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/robertson.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/earm_1_3.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/expression_observables.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/explicit.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/fricker_2010_apoptosis.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_tutorial_a.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/synth_deg.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/bax_pore_sequential.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/bngwiki_enzymatic_cycle_mm.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_bng_ssa_example.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/bngwiki_simple.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_tyson_oscillator.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/tutorial_b.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/tyson_oscillator.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_fixed_initial.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/michment.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_robertson.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/hello_pysb.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_earm_hpp.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_michment.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_earm_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/run_kinase_cascade.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/examples/bax_pore.py -> build/bdist.linux-armv7l/wheel/pysb/examples
2019-07-09T00:27:18   copying build/lib/pysb/_version.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/annotation.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/builder.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/generator
2019-07-09T00:27:18   copying build/lib/pysb/generator/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/generator
2019-07-09T00:27:18   copying build/lib/pysb/generator/bng.py -> build/bdist.linux-armv7l/wheel/pysb/generator
2019-07-09T00:27:18   copying build/lib/pysb/generator/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/generator
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   copying build/lib/pysb/tools/species_graph.py -> build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   copying build/lib/pysb/tools/sensitivity_analysis.py -> build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   copying build/lib/pysb/tools/render_species.py -> build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   copying build/lib/pysb/tools/render_reactions.py -> build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   copying build/lib/pysb/tools/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/tools
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/testing
2019-07-09T00:27:18   copying build/lib/pysb/testing/modeltests.py -> build/bdist.linux-armv7l/wheel/pysb/testing
2019-07-09T00:27:18   copying build/lib/pysb/testing/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/testing
2019-07-09T00:27:18   copying build/lib/pysb/merge.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/bngl.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/mathematica.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/__main__.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/matlab.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/potterswheel.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/bng_net.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/pysb_flat.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/sbml.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/python.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/export/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/export
2019-07-09T00:27:18   copying build/lib/pysb/macros.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/base.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/cupsoda.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/scipyode.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/bng.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   copying build/lib/pysb/simulator/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/simulator
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_integrate.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_macros.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_pattern.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_core.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_bng.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_importers.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/jacobian_runtimes.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_simulator_cupsoda.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_merge.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_simulator_bng.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_simulationresult.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_util.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_exporters.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_importer_kappa.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_simulator_stochkit.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_kappa.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_expressions.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_sensitivity_analysis.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_simulator_scipy.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/tests/test_examples.py -> build/bdist.linux-armv7l/wheel/pysb/tests
2019-07-09T00:27:18   copying build/lib/pysb/jacobian.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/integrate.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   creating build/bdist.linux-armv7l/wheel/pysb/importers
2019-07-09T00:27:18   copying build/lib/pysb/importers/bngl.py -> build/bdist.linux-armv7l/wheel/pysb/importers
2019-07-09T00:27:18   copying build/lib/pysb/importers/kappa.py -> build/bdist.linux-armv7l/wheel/pysb/importers
2019-07-09T00:27:18   copying build/lib/pysb/importers/sbml.py -> build/bdist.linux-armv7l/wheel/pysb/importers
2019-07-09T00:27:18   copying build/lib/pysb/importers/__init__.py -> build/bdist.linux-armv7l/wheel/pysb/importers
2019-07-09T00:27:18   copying build/lib/pysb/pathfinder.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/logging.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/util.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/core.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/anneal_mod.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/bng.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/pattern.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   copying build/lib/pysb/__init__.py -> build/bdist.linux-armv7l/wheel/pysb
2019-07-09T00:27:18   running install_egg_info
2019-07-09T00:27:18   running egg_info
2019-07-09T00:27:18   writing pysb.egg-info/PKG-INFO
2019-07-09T00:27:18   writing dependency_links to pysb.egg-info/dependency_links.txt
2019-07-09T00:27:18   writing requirements to pysb.egg-info/requires.txt
2019-07-09T00:27:18   writing top-level names to pysb.egg-info/top_level.txt
2019-07-09T00:27:19   reading manifest file 'pysb.egg-info/SOURCES.txt'
2019-07-09T00:27:19   reading manifest template 'MANIFEST.in'
2019-07-09T00:27:19   no previously-included directories found matching 'doc/_build'
2019-07-09T00:27:19   writing manifest file 'pysb.egg-info/SOURCES.txt'
2019-07-09T00:27:19   Copying pysb.egg-info to build/bdist.linux-armv7l/wheel/pysb-1.9.1-py3.5.egg-info
2019-07-09T00:27:19   running install_scripts
2019-07-09T00:27:19   creating build/bdist.linux-armv7l/wheel/pysb-1.9.1.data
2019-07-09T00:27:19   creating build/bdist.linux-armv7l/wheel/pysb-1.9.1.data/scripts
2019-07-09T00:27:19   copying build/scripts-3.5/pysb_export -> build/bdist.linux-armv7l/wheel/pysb-1.9.1.data/scripts
2019-07-09T00:27:19   changing mode of build/bdist.linux-armv7l/wheel/pysb-1.9.1.data/scripts/pysb_export to 755
2019-07-09T00:27:19   creating build/bdist.linux-armv7l/wheel/pysb-1.9.1.dist-info/WHEEL
2019-07-09T00:27:19   Building wheel for pysb (setup.py): finished with status 'done'
2019-07-09T00:27:19   Stored in directory: /tmp/tmpag0xd35e
2019-07-09T00:27:19 Successfully built pysb
2019-07-09T00:27:19 Cleaning up...
2019-07-09T00:27:19   Removing source in /tmp/pip-wheel-72glpwq1/pysb
2019-07-09T00:27:20 Removed build tracker '/tmp/pip-req-tracker-jp5vt5p2'