2019-07-09T04:02:14 Created temporary directory: /tmp/pip-ephem-wheel-cache-vyex2akj
2019-07-09T04:02:14 Created temporary directory: /tmp/pip-req-tracker-rwj9v_m9
2019-07-09T04:02:14 Created requirements tracker '/tmp/pip-req-tracker-rwj9v_m9'
2019-07-09T04:02:14 Created temporary directory: /tmp/pip-wheel-y_nzkddp
2019-07-09T04:02:14 Collecting mitopipeline==1.1.post2
2019-07-09T04:02:14   1 location(s) to search for versions of mitopipeline:
2019-07-09T04:02:14   * https://pypi.org/simple/mitopipeline/
2019-07-09T04:02:14   Getting page https://pypi.org/simple/mitopipeline/
2019-07-09T04:02:14   Analyzing links from page https://pypi.org/simple/mitopipeline/
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/5d/9b/8337beabd1834f4d3430189ac176944d11a8d44d5dae2785bd24bff4bb8d/MitoPipeline-0.1.tar.gz#sha256=d56911bcaebe3d2e83487e01c3f431bf48b0a1dae8c068a319f1474bce0d5d79 (from https://pypi.org/simple/mitopipeline/), version: 0.1
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/cf/69/ffd813111460b31f8fc6da0c774ff3b0600c02a3e4711609109338372513/mitopipeline-0.11.tar.gz#sha256=680d7b9f2df46e04d9f9e635bf850eb4528f6472a2bb4ea17f8a64e11fbfa4cb (from https://pypi.org/simple/mitopipeline/), version: 0.11
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/3b/d0/b6f7bdd90188537d6e72e08cd3cf16be42ed5fbda99072d97e12e548e52b/mitopipeline-0.12.tar.gz#sha256=e584c0e7d38043a3f39214859ed5f4e3cb2e410b077d8c899769d76f514d7a97 (from https://pypi.org/simple/mitopipeline/), version: 0.12
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/89/a1/28523ab054e9d0357bd2363c9651150f5a1d53aadd5d2a1aa5df6a41f7d1/mitopipeline-0.13.tar.gz#sha256=17a23b0c03791e566a939ec23a405b2560ff1e68e36f511e305ad9dafe2014ac (from https://pypi.org/simple/mitopipeline/), version: 0.13
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/08/db/d5629c98955a06c4216a438b30a4c69030f531094596aa83f0ed484e1396/mitopipeline-1.0.tar.gz#sha256=73fa17138aba695edbbf1923a795e6051306f97acdf1f00317857ef6af2d165c (from https://pypi.org/simple/mitopipeline/), version: 1.0
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/f3/76/90790504070e7627fe0de968484415752b27d95c359c56018c6b534d49f6/mitopipeline-1.0.post1.tar.gz#sha256=5b603c61e07f96c066823550e45e0446cf04f58b8096b4fe29801d261831813d (from https://pypi.org/simple/mitopipeline/), version: 1.0.post1
2019-07-09T04:02:15     Skipping link https://files.pythonhosted.org/packages/aa/20/435aaf4fcbda8e3eb247da9007832c4a41688a2dff5f4348b4a15b8211cc/mitopipeline-1.0.post2-py3.6.egg#sha256=fe4ac3118728b9c62b2b8500eb9bd8594c8822c296237c9db40ed30e7812e996 (from https://pypi.org/simple/mitopipeline/); unsupported archive format: .egg
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/59/06/853ea3900a7b6ae5ad5b2cc7c5efe9136ca8042d86ddbabfb425048e8fbf/mitopipeline-1.0.post2.tar.gz#sha256=78356b2d55babe29c27d46beaa5df03083861873ddb046b921798a980868048f (from https://pypi.org/simple/mitopipeline/), version: 1.0.post2
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/81/aa/5df89bda98a25867b208ff7929aa52d06f48a5e0e9460449bb874273f63e/mitopipeline-1.1.tar.gz#sha256=717f5c823af92aa154745fa8932f1dad8d297bc92710257f8fbda7aeef33ba87 (from https://pypi.org/simple/mitopipeline/), version: 1.1
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/d3/a6/3c067b7dd13ed7b5af914ba984ea758a17db888c2873a0315df911d49f53/mitopipeline-1.1.post1.tar.gz#sha256=dc05a5ba6ad1b4f6a5ccd3304eb2053dd044f19495fbf3ffd76d6e82c05f1ce2 (from https://pypi.org/simple/mitopipeline/), version: 1.1.post1
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz#sha256=40d5756e50ef694e608a686518a5f56f5df42a1cd4d4be59e074f52b0881bb12 (from https://pypi.org/simple/mitopipeline/), version: 1.1.post2
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/65/21/be471082d6bbbfc5ac4f57b1edd34b31016804a167c31d231888dee68bf7/mitopipeline-1.1.post3.tar.gz#sha256=07a2441272a7d90b05e2a46da2ddb9cba34636788908c5e8d3e9851fcbeb0987 (from https://pypi.org/simple/mitopipeline/), version: 1.1.post3
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/8c/cd/22b4a9114f182218ff352dba4219c8ade23808e6a688803cf91d263fbba6/mitopipeline-1.1.post4.tar.gz#sha256=e6e890f44ca519276d40b2fa3fba99a2a9a17ceec563c559c49852849ae81262 (from https://pypi.org/simple/mitopipeline/), version: 1.1.post4
2019-07-09T04:02:15     Found link https://files.pythonhosted.org/packages/1a/e5/3ae059daaeabb018ab04d7ae88c1deffcacc19a8b2abe6d55a955537d00c/mitopipeline-1.1.post5.tar.gz#sha256=9090d339da8a4243046d4043ea41c865d200304e9a08abd66a1dc4fc6cf3ec8a (from https://pypi.org/simple/mitopipeline/), version: 1.1.post5
2019-07-09T04:02:15   Using version 1.1.post2 (newest of versions: 1.1.post2)
2019-07-09T04:02:15   Created temporary directory: /tmp/pip-unpack-znypj6aw
2019-07-09T04:02:17   Downloading https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz (72.6MB)
2019-07-09T04:02:17   Downloading from URL https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz#sha256=40d5756e50ef694e608a686518a5f56f5df42a1cd4d4be59e074f52b0881bb12 (from https://pypi.org/simple/mitopipeline/)
2019-07-09T04:02:33   Added mitopipeline==1.1.post2 from https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz#sha256=40d5756e50ef694e608a686518a5f56f5df42a1cd4d4be59e074f52b0881bb12 to build tracker '/tmp/pip-req-tracker-rwj9v_m9'
2019-07-09T04:02:33     Running setup.py (path:/tmp/pip-wheel-y_nzkddp/mitopipeline/setup.py) egg_info for package mitopipeline
2019-07-09T04:02:33     Running command python setup.py egg_info
2019-07-09T04:02:44     zip_safe flag not set; analyzing archive contents...
2019-07-09T04:02:44     luigi.__pycache__.server.cpython-35: module references __file__
2019-07-09T04:02:44     luigi.__pycache__.six.cpython-35: module references __path__
2019-07-09T04:02:44     luigi.contrib.__pycache__.hadoop.cpython-35: module references __file__
2019-07-09T04:02:44     luigi.contrib.__pycache__.hadoop.cpython-35: module references __path__
2019-07-09T04:02:44     luigi.contrib.__pycache__.lsf.cpython-35: module references __file__
2019-07-09T04:02:45     luigi.contrib.__pycache__.sge.cpython-35: module references __file__
2019-07-09T04:02:45     luigi.contrib.__pycache__.spark.cpython-35: module references __file__
2019-07-09T04:02:45     luigi.contrib.__pycache__.spark.cpython-35: module references __path__

2019-07-09T04:02:49     Installed /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/luigi-2.8.7-py3.5.egg
2019-07-09T04:02:50     Searching for python-dateutil<3,>=2.7.5
2019-07-09T04:02:50     Reading https://pypi.org/simple/python-dateutil/
2019-07-09T04:02:50     Downloading https://files.pythonhosted.org/packages/41/17/c62faccbfbd163c7f57f3844689e3a78bae1f403648a6afb1d0866d87fbb/python_dateutil-2.8.0-py2.py3-none-any.whl#sha256=7e6584c74aeed623791615e26efd690f29817a27c73085b78e4bad02493df2fb
2019-07-09T04:02:51     Best match: python-dateutil 2.8.0
2019-07-09T04:02:51     Processing python_dateutil-2.8.0-py2.py3-none-any.whl
2019-07-09T04:02:51     Installing python_dateutil-2.8.0-py2.py3-none-any.whl to /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs
2019-07-09T04:02:51     writing requirements to /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/python_dateutil-2.8.0-py3.5.egg/EGG-INFO/requires.txt

2019-07-09T04:02:51     Installed /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/python_dateutil-2.8.0-py3.5.egg
2019-07-09T04:02:51     Searching for python-daemon<2.2.0
2019-07-09T04:02:51     Reading https://pypi.org/simple/python-daemon/
2019-07-09T04:02:52     Downloading https://files.pythonhosted.org/packages/f4/59/816004688f8e8602526553cd96226f34657ce4a86daa2240c3eebb0568a3/python_daemon-2.1.2-py2.py3-none-any.whl#sha256=53da55aec3bb67b576e13a8091a2181f99b395c2eec32a5a0d91d347a5c420a7
2019-07-09T04:02:52     Best match: python-daemon 2.1.2
2019-07-09T04:02:52     Processing python_daemon-2.1.2-py2.py3-none-any.whl
2019-07-09T04:02:52     Installing python_daemon-2.1.2-py2.py3-none-any.whl to /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs
2019-07-09T04:02:52     writing requirements to /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/python_daemon-2.1.2-py3.5.egg/EGG-INFO/requires.txt

2019-07-09T04:02:52     Installed /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/python_daemon-2.1.2-py3.5.egg
2019-07-09T04:02:53     Searching for lockfile>=0.10
2019-07-09T04:02:53     Reading https://pypi.org/simple/lockfile/
2019-07-09T04:02:53     Downloading https://files.pythonhosted.org/packages/c8/22/9460e311f340cb62d26a38c419b1381b8593b0bb6b5d1f056938b086d362/lockfile-0.12.2-py2.py3-none-any.whl#sha256=6c3cb24f344923d30b2785d5ad75182c8ea7ac1b6171b08657258ec7429d50fa
2019-07-09T04:02:53     Best match: lockfile 0.12.2
2019-07-09T04:02:53     Processing lockfile-0.12.2-py2.py3-none-any.whl
2019-07-09T04:02:53     Installing lockfile-0.12.2-py2.py3-none-any.whl to /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs

2019-07-09T04:02:53     Installed /tmp/pip-wheel-y_nzkddp/mitopipeline/.eggs/lockfile-0.12.2-py3.5.egg
2019-07-09T04:02:53     running egg_info
2019-07-09T04:02:53     creating pip-egg-info/mitopipeline.egg-info
2019-07-09T04:02:53     writing dependency_links to pip-egg-info/mitopipeline.egg-info/dependency_links.txt
2019-07-09T04:02:53     writing requirements to pip-egg-info/mitopipeline.egg-info/requires.txt
2019-07-09T04:02:53     writing pip-egg-info/mitopipeline.egg-info/PKG-INFO
2019-07-09T04:02:53     writing entry points to pip-egg-info/mitopipeline.egg-info/entry_points.txt
2019-07-09T04:02:53     writing top-level names to pip-egg-info/mitopipeline.egg-info/top_level.txt
2019-07-09T04:02:53     writing manifest file 'pip-egg-info/mitopipeline.egg-info/SOURCES.txt'
2019-07-09T04:02:54     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '1.1post2' to '1.1.post2'
2019-07-09T04:02:54       normalized_version,
2019-07-09T04:02:54     file mitopipeline.py (for module mitopipeline) not found
2019-07-09T04:02:54     reading manifest file 'pip-egg-info/mitopipeline.egg-info/SOURCES.txt'
2019-07-09T04:02:54     reading manifest template 'MANIFEST.in'
2019-07-09T04:02:54     warning: no files found matching 'mitopipeline/tools/*'
2019-07-09T04:02:54     writing manifest file 'pip-egg-info/mitopipeline.egg-info/SOURCES.txt'
2019-07-09T04:02:54   Source in /tmp/pip-wheel-y_nzkddp/mitopipeline has version 1.1.post2, which satisfies requirement mitopipeline==1.1.post2 from https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz#sha256=40d5756e50ef694e608a686518a5f56f5df42a1cd4d4be59e074f52b0881bb12
2019-07-09T04:02:54   Removed mitopipeline==1.1.post2 from https://files.pythonhosted.org/packages/0f/d4/b5c973d094a1b2bedf9d1c16e72f3a1aa0d312952074c787b2240dc65756/mitopipeline-1.1.post2.tar.gz#sha256=40d5756e50ef694e608a686518a5f56f5df42a1cd4d4be59e074f52b0881bb12 from build tracker '/tmp/pip-req-tracker-rwj9v_m9'
2019-07-09T04:02:54 Building wheels for collected packages: mitopipeline
2019-07-09T04:02:54   Created temporary directory: /tmp/pip-wheel-im562lew
2019-07-09T04:02:54   Building wheel for mitopipeline (setup.py): started
2019-07-09T04:02:54   Destination directory: /tmp/pip-wheel-im562lew
2019-07-09T04:02:54   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-y_nzkddp/mitopipeline/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-im562lew
2019-07-09T04:02:59   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '1.1post2' to '1.1.post2'
2019-07-09T04:02:59     normalized_version,
2019-07-09T04:02:59   running bdist_wheel
2019-07-09T04:02:59   running build
2019-07-09T04:02:59   running build_py
2019-07-09T04:02:59   file mitopipeline.py (for module mitopipeline) not found
2019-07-09T04:02:59   creating build
2019-07-09T04:02:59   creating build/lib
2019-07-09T04:02:59   creating build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/pipeline_builder.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/config.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/cmdline_parser.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/pipeline_runner.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/templates.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/downloader.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/logging.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/util.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/__init__.py -> build/lib/mitopipeline
2019-07-09T04:02:59   copying mitopipeline/cmdline.py -> build/lib/mitopipeline
2019-07-09T04:02:59   creating build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/gatk.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/clipping.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/removenumts.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/splitgap.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/submit_job.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/remove_numts_no_split_gap.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/downsample.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/split_bams.py -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/annovar.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/read_depths.py -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/snpeff.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   copying mitopipeline/steps/extractmito.sh -> build/lib/mitopipeline/steps
2019-07-09T04:02:59   creating build/lib/mitopipeline/steps/dbsnp
2019-07-09T04:02:59   copying mitopipeline/steps/dbsnp/mtONLY.vcf -> build/lib/mitopipeline/steps/dbsnp
2019-07-09T04:02:59   copying mitopipeline/steps/dbsnp/mtONLY.vcf.idx -> build/lib/mitopipeline/steps/dbsnp
2019-07-09T04:02:59   creating build/lib/mitopipeline/steps/tools
2019-07-09T04:02:59   copying mitopipeline/steps/tools/MarkDuplicates.jar -> build/lib/mitopipeline/steps/tools
2019-07-09T04:02:59   copying mitopipeline/steps/tools/SamToFastq.jar -> build/lib/mitopipeline/steps/tools
2019-07-09T04:02:59   copying mitopipeline/steps/tools/AddOrReplaceReadGroups.jar -> build/lib/mitopipeline/steps/tools
2019-07-09T04:02:59   copying mitopipeline/steps/tools/FixMateInformation.jar -> build/lib/mitopipeline/steps/tools
2019-07-09T04:02:59   file mitopipeline.py (for module mitopipeline) not found
2019-07-09T04:02:59   installing to build/bdist.linux-armv7l/wheel
2019-07-09T04:02:59   running install
2019-07-09T04:02:59   running install_lib
2019-07-09T04:02:59   creating build/bdist.linux-armv7l
2019-07-09T04:02:59   creating build/bdist.linux-armv7l/wheel
2019-07-09T04:02:59   creating build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:02:59   copying build/lib/mitopipeline/pipeline_builder.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:02:59   copying build/lib/mitopipeline/config.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/cmdline_parser.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/pipeline_runner.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/templates.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   creating build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/gatk.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/clipping.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/removenumts.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/splitgap.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/submit_job.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/remove_numts_no_split_gap.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/downsample.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   creating build/bdist.linux-armv7l/wheel/mitopipeline/steps/tools
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/tools/MarkDuplicates.jar -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/tools
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/tools/SamToFastq.jar -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/tools
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/tools/AddOrReplaceReadGroups.jar -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/tools
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/tools/FixMateInformation.jar -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/tools
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/split_bams.py -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/annovar.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/read_depths.py -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/snpeff.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   creating build/bdist.linux-armv7l/wheel/mitopipeline/steps/dbsnp
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/dbsnp/mtONLY.vcf -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/dbsnp
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/dbsnp/mtONLY.vcf.idx -> build/bdist.linux-armv7l/wheel/mitopipeline/steps/dbsnp
2019-07-09T04:03:00   copying build/lib/mitopipeline/steps/extractmito.sh -> build/bdist.linux-armv7l/wheel/mitopipeline/steps
2019-07-09T04:03:00   copying build/lib/mitopipeline/downloader.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/logging.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/util.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/__init__.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   copying build/lib/mitopipeline/cmdline.py -> build/bdist.linux-armv7l/wheel/mitopipeline
2019-07-09T04:03:00   running install_egg_info
2019-07-09T04:03:00   running egg_info
2019-07-09T04:03:00   writing top-level names to mitopipeline.egg-info/top_level.txt
2019-07-09T04:03:00   writing requirements to mitopipeline.egg-info/requires.txt
2019-07-09T04:03:00   writing mitopipeline.egg-info/PKG-INFO
2019-07-09T04:03:00   writing entry points to mitopipeline.egg-info/entry_points.txt
2019-07-09T04:03:00   writing dependency_links to mitopipeline.egg-info/dependency_links.txt
2019-07-09T04:03:00   file mitopipeline.py (for module mitopipeline) not found
2019-07-09T04:03:00   reading manifest file 'mitopipeline.egg-info/SOURCES.txt'
2019-07-09T04:03:00   reading manifest template 'MANIFEST.in'
2019-07-09T04:03:00   warning: no files found matching 'mitopipeline/tools/*'
2019-07-09T04:03:00   writing manifest file 'mitopipeline.egg-info/SOURCES.txt'
2019-07-09T04:03:00   Copying mitopipeline.egg-info to build/bdist.linux-armv7l/wheel/mitopipeline-1.1.post2-py3.5.egg-info
2019-07-09T04:03:00   running install_scripts
2019-07-09T04:03:00   creating build/bdist.linux-armv7l/wheel/mitopipeline-1.1.post2.dist-info/WHEEL
2019-07-09T04:03:01   Building wheel for mitopipeline (setup.py): finished with status 'done'
2019-07-09T04:03:01   Stored in directory: /tmp/tmp06wic4or
2019-07-09T04:03:01 Successfully built mitopipeline
2019-07-09T04:03:01 Cleaning up...
2019-07-09T04:03:01   Removing source in /tmp/pip-wheel-y_nzkddp/mitopipeline
2019-07-09T04:03:02 Removed build tracker '/tmp/pip-req-tracker-rwj9v_m9'