2019-07-09T13:20:27 Created temporary directory: /tmp/pip-ephem-wheel-cache-whujhbuy 2019-07-09T13:20:27 Created temporary directory: /tmp/pip-req-tracker-9vovcywp 2019-07-09T13:20:27 Created requirements tracker '/tmp/pip-req-tracker-9vovcywp' 2019-07-09T13:20:27 Created temporary directory: /tmp/pip-wheel-9s2cp1dq 2019-07-09T13:20:27 Collecting AdaptivePELE==1.5.2 2019-07-09T13:20:27 1 location(s) to search for versions of AdaptivePELE: 2019-07-09T13:20:27 * https://pypi.org/simple/adaptivepele/ 2019-07-09T13:20:27 Getting page https://pypi.org/simple/adaptivepele/ 2019-07-09T13:20:27 Analyzing links from page https://pypi.org/simple/adaptivepele/ 2019-07-09T13:20:27 Found link https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 (from https://pypi.org/simple/adaptivepele/), version: 1.5.1 2019-07-09T13:20:27 Found link https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 (from https://pypi.org/simple/adaptivepele/), version: 1.5.2 2019-07-09T13:20:27 Found link https://files.pythonhosted.org/packages/48/3b/f12bfdcfd7f0fdcb2f58d659ff94c26666767eec4ca8454750a3241c395e/AdaptivePELE-1.6.tar.gz#sha256=afc51a35222361e6c0caf880e1d52e91b5658dbe4740f82a3460a97ebaa48bf5 (from https://pypi.org/simple/adaptivepele/), version: 1.6 2019-07-09T13:20:27 Using version 1.5.2 (newest of versions: 1.5.2) 2019-07-09T13:20:27 Created temporary directory: /tmp/pip-unpack-_m2xv0_e 2019-07-09T13:20:28 Downloading https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz (3.0MB) 2019-07-09T13:20:28 Downloading from URL https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 (from https://pypi.org/simple/adaptivepele/) 2019-07-09T13:20:29 Added AdaptivePELE==1.5.2 from https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 to build tracker '/tmp/pip-req-tracker-9vovcywp' 2019-07-09T13:20:29 Running setup.py (path:/tmp/pip-wheel-9s2cp1dq/AdaptivePELE/setup.py) egg_info for package AdaptivePELE 2019-07-09T13:20:29 Running command python setup.py egg_info 2019-07-09T13:20:32 Warning: 'classifiers' should be a list, got type 'tuple' 2019-07-09T13:20:32 running egg_info 2019-07-09T13:20:32 creating pip-egg-info/AdaptivePELE.egg-info 2019-07-09T13:20:32 writing pip-egg-info/AdaptivePELE.egg-info/PKG-INFO 2019-07-09T13:20:32 writing dependency_links to pip-egg-info/AdaptivePELE.egg-info/dependency_links.txt 2019-07-09T13:20:32 writing requirements to pip-egg-info/AdaptivePELE.egg-info/requires.txt 2019-07-09T13:20:32 writing top-level names to pip-egg-info/AdaptivePELE.egg-info/top_level.txt 2019-07-09T13:20:32 writing manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' 2019-07-09T13:20:32 reading manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' 2019-07-09T13:20:32 reading manifest template 'MANIFEST.in' 2019-07-09T13:20:32 writing manifest file 'pip-egg-info/AdaptivePELE.egg-info/SOURCES.txt' 2019-07-09T13:20:32 Source in /tmp/pip-wheel-9s2cp1dq/AdaptivePELE has version 1.5.2, which satisfies requirement AdaptivePELE==1.5.2 from https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 2019-07-09T13:20:32 Removed AdaptivePELE==1.5.2 from https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 from build tracker '/tmp/pip-req-tracker-9vovcywp' 2019-07-09T13:20:32 Building wheels for collected packages: AdaptivePELE 2019-07-09T13:20:32 Created temporary directory: /tmp/pip-wheel-du1of81s 2019-07-09T13:20:32 Building wheel for AdaptivePELE (setup.py): started 2019-07-09T13:20:32 Destination directory: /tmp/pip-wheel-du1of81s 2019-07-09T13:20:32 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-9s2cp1dq/AdaptivePELE/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-du1of81s 2019-07-09T13:20:34 Warning: 'classifiers' should be a list, got type 'tuple' 2019-07-09T13:20:34 running bdist_wheel 2019-07-09T13:20:34 running build 2019-07-09T13:20:34 running build_py 2019-07-09T13:20:34 creating build 2019-07-09T13:20:34 creating build/lib.linux-armv7l-3.7 2019-07-09T13:20:34 creating build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:34 copying AdaptivePELE/runAllTests.py -> build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:34 copying AdaptivePELE/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:34 copying AdaptivePELE/automateRoundsAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:34 copying AdaptivePELE/adaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:35 copying AdaptivePELE/makeRelease.py -> build/lib.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/utilities 2019-07-09T13:20:35 copying AdaptivePELE/utilities/utilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities 2019-07-09T13:20:35 copying AdaptivePELE/utilities/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities 2019-07-09T13:20:35 copying AdaptivePELE/utilities/clusteringUtilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/constants 2019-07-09T13:20:35 copying AdaptivePELE/constants/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants 2019-07-09T13:20:35 copying AdaptivePELE/constants/blockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants 2019-07-09T13:20:35 copying AdaptivePELE/constants/symmetries.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants 2019-07-09T13:20:35 copying AdaptivePELE/constants/constants.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/atomset 2019-07-09T13:20:35 copying AdaptivePELE/atomset/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset 2019-07-09T13:20:35 copying AdaptivePELE/atomset/setup.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/validator 2019-07-09T13:20:35 copying AdaptivePELE/validator/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator 2019-07-09T13:20:35 copying AdaptivePELE/validator/controlFileValidator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator 2019-07-09T13:20:35 copying AdaptivePELE/validator/validatorBlockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/simulation 2019-07-09T13:20:35 copying AdaptivePELE/simulation/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation 2019-07-09T13:20:35 copying AdaptivePELE/simulation/simulationrunner.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation 2019-07-09T13:20:35 copying AdaptivePELE/simulation/simulationTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 copying AdaptivePELE/clustering/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 copying AdaptivePELE/clustering/thresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 copying AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 copying AdaptivePELE/clustering/clusteringTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 copying AdaptivePELE/clustering/clustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/writeNetworkFiles.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/compareClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/convertTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/pathwayRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/plot3DNetwork.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/analyse.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/analyseClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/networkCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/plotAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/addRejectedSteps.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/findfirstbindingevent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/plotRMSF.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/numberOfClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/writeClusteringStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/splitTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/correctRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/makePNGs.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/histCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 copying AdaptivePELE/analysis/plotSpawningClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 copying AdaptivePELE/spawning/densitycalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 copying AdaptivePELE/spawning/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 copying AdaptivePELE/spawning/densitycalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 copying AdaptivePELE/spawning/spawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 copying AdaptivePELE/spawning/spawningTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testAtomset.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testSpawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testThresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testDensityCalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 copying AdaptivePELE/tests/testAdaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests 2019-07-09T13:20:35 creating build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/computeDeltaG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/extractCoords.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/computeDGGrid.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/extendTrajectories.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/cluster.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/estimate.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/estimateDG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 copying AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies 2019-07-09T13:20:35 running build_ext 2019-07-09T13:20:35 skipping 'AdaptivePELE/atomset/atomset.c' Cython extension (up-to-date) 2019-07-09T13:20:35 building 'AdaptivePELE.atomset.atomset' extension 2019-07-09T13:20:35 creating build/temp.linux-armv7l-3.7 2019-07-09T13:20:35 creating build/temp.linux-armv7l-3.7/AdaptivePELE 2019-07-09T13:20:35 creating build/temp.linux-armv7l-3.7/AdaptivePELE/atomset 2019-07-09T13:20:35 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/atomset.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.o 2019-07-09T13:20:35 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-07-09T13:20:35 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-07-09T13:20:35 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-07-09T13:20:35 from AdaptivePELE/atomset/atomset.c:485: 2019-07-09T13:20:35 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-07-09T13:20:35 #warning "Using deprecated NumPy API, disable it with " \ 2019-07-09T13:20:35 ^~~~~~~ 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c: In function ‘__Pyx__ExceptionSave’: 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27533:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:37 *type = tstate->exc_type; 2019-07-09T13:20:37 ^~~~~~~~ 2019-07-09T13:20:37 curexc_type 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27534:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:37 *value = tstate->exc_value; 2019-07-09T13:20:37 ^~~~~~~~~ 2019-07-09T13:20:37 curexc_value 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27535:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:37 *tb = tstate->exc_traceback; 2019-07-09T13:20:37 ^~~~~~~~~~~~~ 2019-07-09T13:20:37 curexc_traceback 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c: In function ‘__Pyx__ExceptionReset’: 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27542:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:37 tmp_type = tstate->exc_type; 2019-07-09T13:20:37 ^~~~~~~~ 2019-07-09T13:20:37 curexc_type 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27543:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:37 tmp_value = tstate->exc_value; 2019-07-09T13:20:37 ^~~~~~~~~ 2019-07-09T13:20:37 curexc_value 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27544:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:37 tmp_tb = tstate->exc_traceback; 2019-07-09T13:20:37 ^~~~~~~~~~~~~ 2019-07-09T13:20:37 curexc_traceback 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27545:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:37 tstate->exc_type = type; 2019-07-09T13:20:37 ^~~~~~~~ 2019-07-09T13:20:37 curexc_type 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27546:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:37 tstate->exc_value = value; 2019-07-09T13:20:37 ^~~~~~~~~ 2019-07-09T13:20:37 curexc_value 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:27547:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:37 tstate->exc_traceback = tb; 2019-07-09T13:20:37 ^~~~~~~~~~~~~ 2019-07-09T13:20:37 curexc_traceback 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c: In function ‘__Pyx__GetException’: 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28646:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:37 tmp_type = tstate->exc_type; 2019-07-09T13:20:37 ^~~~~~~~ 2019-07-09T13:20:37 curexc_type 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28647:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:37 tmp_value = tstate->exc_value; 2019-07-09T13:20:37 ^~~~~~~~~ 2019-07-09T13:20:37 curexc_value 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28648:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:37 tmp_tb = tstate->exc_traceback; 2019-07-09T13:20:37 ^~~~~~~~~~~~~ 2019-07-09T13:20:37 curexc_traceback 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28649:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:37 tstate->exc_type = local_type; 2019-07-09T13:20:37 ^~~~~~~~ 2019-07-09T13:20:37 curexc_type 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28650:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:37 tstate->exc_value = local_value; 2019-07-09T13:20:37 ^~~~~~~~~ 2019-07-09T13:20:37 curexc_value 2019-07-09T13:20:37 AdaptivePELE/atomset/atomset.c:28651:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:37 tstate->exc_traceback = local_tb; 2019-07-09T13:20:37 ^~~~~~~~~~~~~ 2019-07-09T13:20:37 curexc_traceback 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c: In function ‘__Pyx__ExceptionSwap’: 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30317:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:38 tmp_type = tstate->exc_type; 2019-07-09T13:20:38 ^~~~~~~~ 2019-07-09T13:20:38 curexc_type 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30318:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:38 tmp_value = tstate->exc_value; 2019-07-09T13:20:38 ^~~~~~~~~ 2019-07-09T13:20:38 curexc_value 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30319:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:38 tmp_tb = tstate->exc_traceback; 2019-07-09T13:20:38 ^~~~~~~~~~~~~ 2019-07-09T13:20:38 curexc_traceback 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30320:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-09T13:20:38 tstate->exc_type = *type; 2019-07-09T13:20:38 ^~~~~~~~ 2019-07-09T13:20:38 curexc_type 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30321:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-09T13:20:38 tstate->exc_value = *value; 2019-07-09T13:20:38 ^~~~~~~~~ 2019-07-09T13:20:38 curexc_value 2019-07-09T13:20:38 AdaptivePELE/atomset/atomset.c:30322:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-09T13:20:38 tstate->exc_traceback = *tb; 2019-07-09T13:20:38 ^~~~~~~~~~~~~ 2019-07-09T13:20:38 curexc_traceback 2019-07-09T13:20:39 error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1 2019-07-09T13:20:39 Building wheel for AdaptivePELE (setup.py): finished with status 'error' 2019-07-09T13:20:39 ERROR: Failed building wheel for AdaptivePELE 2019-07-09T13:20:39 Running setup.py clean for AdaptivePELE 2019-07-09T13:20:39 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-9s2cp1dq/AdaptivePELE/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2019-07-09T13:20:41 Warning: 'classifiers' should be a list, got type 'tuple' 2019-07-09T13:20:41 running clean 2019-07-09T13:20:41 removing 'build/temp.linux-armv7l-3.7' (and everything under it) 2019-07-09T13:20:41 removing 'build/lib.linux-armv7l-3.7' (and everything under it) 2019-07-09T13:20:41 'build/bdist.linux-armv7l' does not exist -- can't clean it 2019-07-09T13:20:41 'build/scripts-3.7' does not exist -- can't clean it 2019-07-09T13:20:41 removing 'build' 2019-07-09T13:20:42 Failed to build AdaptivePELE 2019-07-09T13:20:42 Cleaning up... 2019-07-09T13:20:42 Removing source in /tmp/pip-wheel-9s2cp1dq/AdaptivePELE 2019-07-09T13:20:42 Removed build tracker '/tmp/pip-req-tracker-9vovcywp' 2019-07-09T13:20:42 ERROR: Failed to build one or more wheels 2019-07-09T13:20:42 Exception information: 2019-07-09T13:20:42 Traceback (most recent call last): 2019-07-09T13:20:42 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/base_command.py", line 178, in main 2019-07-09T13:20:42 status = self.run(options, args) 2019-07-09T13:20:42 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/commands/wheel.py", line 178, in run 2019-07-09T13:20:42 "Failed to build one or more wheels" 2019-07-09T13:20:42 pip._internal.exceptions.CommandError: Failed to build one or more wheels