2019-07-13T10:56:40 Created temporary directory: /tmp/pip-ephem-wheel-cache-2erfpfgf 2019-07-13T10:56:40 Created temporary directory: /tmp/pip-req-tracker-1vo1bc77 2019-07-13T10:56:40 Created requirements tracker '/tmp/pip-req-tracker-1vo1bc77' 2019-07-13T10:56:40 Created temporary directory: /tmp/pip-wheel-3befa6m2 2019-07-13T10:56:40 Collecting candig-server==1.0.0 2019-07-13T10:56:40 1 location(s) to search for versions of candig-server: 2019-07-13T10:56:40 * https://pypi.org/simple/candig-server/ 2019-07-13T10:56:40 Getting page https://pypi.org/simple/candig-server/ 2019-07-13T10:56:40 Analyzing links from page https://pypi.org/simple/candig-server/ 2019-07-13T10:56:40 Found link https://files.pythonhosted.org/packages/d5/df/0e57e32ce7092c7ffe325db1e84ea7e018b1711cc21785cb58b30800a8ff/candig-server-0.9.3.tar.gz#sha256=d22b3176c646f6b3a1b5e070459717028f91cc1364900a5df81d0c63ffed004f (from https://pypi.org/simple/candig-server/), version: 0.9.3 2019-07-13T10:56:40 Skipping link https://files.pythonhosted.org/packages/24/27/f0c735ad823a16e6c1ae786d22ae955120f9c7ca5d8987eba0798d5bf38d/candig_server-0.9.3-py2-none-any.whl#sha256=5df1ea6ce86b5f823d587ff8d83bb45d7d60633c8b6350b00f6f897896189e39 (from https://pypi.org/simple/candig-server/); it is not compatible with this Python 2019-07-13T10:56:40 Found link https://files.pythonhosted.org/packages/9b/69/43e06d8a2549fc917e780ba3b23b37e12ca1e7d88ae26b02c03d9b59b94c/candig-server-0.9.4.tar.gz#sha256=715c102847daf6ae86a8e342b22a4a9e783412964d25a576ef7c37b551f98c1f (from https://pypi.org/simple/candig-server/), version: 0.9.4 2019-07-13T10:56:40 Skipping link https://files.pythonhosted.org/packages/ba/bc/4cff60e337068f9210c9d5a63ac43755392da0f62f4ee7262f1619ad1658/candig_server-0.9.4-py2-none-any.whl#sha256=f6a00769a506c426ba0b6d639d869ec90644ff35b76b44632e41042216d2e183 (from https://pypi.org/simple/candig-server/); it is not compatible with this Python 2019-07-13T10:56:40 Found link https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz#sha256=2858d42f8e10f770db67e2f377b496663c4050147b5430f4dce4c32f9314a4bf (from https://pypi.org/simple/candig-server/), version: 1.0.0 2019-07-13T10:56:40 Skipping link https://files.pythonhosted.org/packages/0c/46/b8f30a2c18ebd7d7e0ea6583a51347f32689d3376664b74178e76329bd88/candig_server-1.0.0-py2-none-any.whl#sha256=40d0725122fae5c71b5c05a9961308e4d686170c873076282f1ada74a324f8cf (from https://pypi.org/simple/candig-server/); it is not compatible with this Python 2019-07-13T10:56:40 Using version 1.0.0 (newest of versions: 1.0.0) 2019-07-13T10:56:40 Created temporary directory: /tmp/pip-unpack-0k7wsffh 2019-07-13T10:56:40 Downloading https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz (1.8MB) 2019-07-13T10:56:40 Downloading from URL https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz#sha256=2858d42f8e10f770db67e2f377b496663c4050147b5430f4dce4c32f9314a4bf (from https://pypi.org/simple/candig-server/) 2019-07-13T10:56:44 Added candig-server==1.0.0 from https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz#sha256=2858d42f8e10f770db67e2f377b496663c4050147b5430f4dce4c32f9314a4bf to build tracker '/tmp/pip-req-tracker-1vo1bc77' 2019-07-13T10:56:44 Running setup.py (path:/tmp/pip-wheel-3befa6m2/candig-server/setup.py) egg_info for package candig-server 2019-07-13T10:56:44 Running command python setup.py egg_info 2019-07-13T10:56:51 running egg_info 2019-07-13T10:56:51 creating pip-egg-info/candig_server.egg-info 2019-07-13T10:56:51 writing pip-egg-info/candig_server.egg-info/PKG-INFO 2019-07-13T10:56:51 writing dependency_links to pip-egg-info/candig_server.egg-info/dependency_links.txt 2019-07-13T10:56:51 writing namespace_packages to pip-egg-info/candig_server.egg-info/namespace_packages.txt 2019-07-13T10:56:51 writing top-level names to pip-egg-info/candig_server.egg-info/top_level.txt 2019-07-13T10:56:51 writing entry points to pip-egg-info/candig_server.egg-info/entry_points.txt 2019-07-13T10:56:51 writing requirements to pip-egg-info/candig_server.egg-info/requires.txt 2019-07-13T10:56:51 writing manifest file 'pip-egg-info/candig_server.egg-info/SOURCES.txt' 2019-07-13T10:56:51 reading manifest file 'pip-egg-info/candig_server.egg-info/SOURCES.txt' 2019-07-13T10:56:51 reading manifest template 'MANIFEST.in' 2019-07-13T10:56:51 writing manifest file 'pip-egg-info/candig_server.egg-info/SOURCES.txt' 2019-07-13T10:56:51 Source in /tmp/pip-wheel-3befa6m2/candig-server has version 1.0.0, which satisfies requirement candig-server==1.0.0 from https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz#sha256=2858d42f8e10f770db67e2f377b496663c4050147b5430f4dce4c32f9314a4bf 2019-07-13T10:56:51 Removed candig-server==1.0.0 from https://files.pythonhosted.org/packages/ef/cd/2443bed402cab54b6469fcc7d0dbd8f949154a4f78f24a0e401fd54d2d17/candig-server-1.0.0.tar.gz#sha256=2858d42f8e10f770db67e2f377b496663c4050147b5430f4dce4c32f9314a4bf from build tracker '/tmp/pip-req-tracker-1vo1bc77' 2019-07-13T10:56:51 Building wheels for collected packages: candig-server 2019-07-13T10:56:51 Created temporary directory: /tmp/pip-wheel-77lann3z 2019-07-13T10:56:51 Building wheel for candig-server (setup.py): started 2019-07-13T10:56:51 Destination directory: /tmp/pip-wheel-77lann3z 2019-07-13T10:56:51 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-3befa6m2/candig-server/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-77lann3z 2019-07-13T10:56:55 running bdist_wheel 2019-07-13T10:56:55 running build 2019-07-13T10:56:55 running build_py 2019-07-13T10:56:55 creating build 2019-07-13T10:56:55 creating build/lib 2019-07-13T10:56:55 creating build/lib/candig 2019-07-13T10:56:55 copying candig/__init__.py -> build/lib/candig 2019-07-13T10:56:55 creating build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/response_builder.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/paging.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/exceptions.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/frontend.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/NCIT.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/sqlite_backend.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/configtest.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/_version.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/DP.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/backend.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/serverconfig.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/__init__.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/gff3.py -> build/lib/candig/server 2019-07-13T10:56:55 copying candig/server/datarepo.py -> build/lib/candig/server 2019-07-13T10:56:55 creating build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/genotype_phenotype.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/peers.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/bio_metadata.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/clinical_metadata.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/obo_parser.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/pipeline_metadata.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/continuous.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/ontologies.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:55 copying candig/server/datamodel/variants.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/genotype_phenotype_featureset.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/reads.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/datasets.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/__init__.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/rna_quantification.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/references.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 copying candig/server/datamodel/sequence_annotations.py -> build/lib/candig/server/datamodel 2019-07-13T10:56:56 creating build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/__init__.py -> build/lib/candig/server/templates 2019-07-13T10:56:56 running egg_info 2019-07-13T10:56:56 writing entry points to candig_server.egg-info/entry_points.txt 2019-07-13T10:56:56 writing dependency_links to candig_server.egg-info/dependency_links.txt 2019-07-13T10:56:56 writing namespace_packages to candig_server.egg-info/namespace_packages.txt 2019-07-13T10:56:56 writing requirements to candig_server.egg-info/requires.txt 2019-07-13T10:56:56 writing candig_server.egg-info/PKG-INFO 2019-07-13T10:56:56 writing top-level names to candig_server.egg-info/top_level.txt 2019-07-13T10:56:56 reading manifest file 'candig_server.egg-info/SOURCES.txt' 2019-07-13T10:56:56 reading manifest template 'MANIFEST.in' 2019-07-13T10:56:56 writing manifest file 'candig_server.egg-info/SOURCES.txt' 2019-07-13T10:56:56 copying candig/server/stuff.cfg -> build/lib/candig/server 2019-07-13T10:56:56 creating build/lib/candig/server/auth 2019-07-13T10:56:56 copying candig/server/auth/__init__.py -> build/lib/candig/server/auth 2019-07-13T10:56:56 creating build/lib/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/__init__.py -> build/lib/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/configtest.py -> build/lib/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/repomanager.py -> build/lib/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/server.py -> build/lib/candig/server/cli 2019-07-13T10:56:56 creating build/lib/candig/server/config 2019-07-13T10:56:56 copying candig/server/config/client_secrets.json -> build/lib/candig/server/config 2019-07-13T10:56:56 creating build/lib/candig/server/network 2019-07-13T10:56:56 copying candig/server/network/__init__.py -> build/lib/candig/server/network 2019-07-13T10:56:56 creating build/lib/candig/server/repo 2019-07-13T10:56:56 copying candig/server/repo/__init__.py -> build/lib/candig/server/repo 2019-07-13T10:56:56 copying candig/server/repo/models.py -> build/lib/candig/server/repo 2019-07-13T10:56:56 copying candig/server/repo/rnaseq2ga.py -> build/lib/candig/server/repo 2019-07-13T10:56:56 creating build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/dashboard.css -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/favicon.ico -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/loader.css -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/logo.png -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/output.swagger.json -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/robots.txt -> build/lib/candig/server/static 2019-07-13T10:56:56 copying candig/server/static/spinner.gif -> build/lib/candig/server/static 2019-07-13T10:56:56 creating build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/custom_visualization.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/dashboard.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/gene_search.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/global.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/patients_overview.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 copying candig/server/static/dist/sample_analysis.js -> build/lib/candig/server/static/dist 2019-07-13T10:56:56 creating build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/custom_visualization.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/dashboard.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/gene_search.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/global.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/patients_overview.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/static/src/sample_analysis.js -> build/lib/candig/server/static/src 2019-07-13T10:56:56 copying candig/server/templates/base.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/custom_visualization.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/dashboard.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/gene_search.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/index.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/initial_peers.txt -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/landing_message.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/patients_overview.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/sample_analysis.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/spa.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 copying candig/server/templates/swagger.html -> build/lib/candig/server/templates 2019-07-13T10:56:56 installing to build/bdist.linux-armv7l/wheel 2019-07-13T10:56:56 running install 2019-07-13T10:56:56 running install_lib 2019-07-13T10:56:56 Skipping installation of build/bdist.linux-armv7l/wheel/candig/__init__.py (namespace package) 2019-07-13T10:56:56 copying candig/server/response_builder.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/paging.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/exceptions.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/frontend.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/stuff.cfg -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/NCIT.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/sqlite_backend.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/configtest.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/_version.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/DP.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/backend.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/serverconfig.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/gff3.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/datarepo.py -> build/bdist.linux-armv7l/wheel/candig/server 2019-07-13T10:56:56 copying candig/server/cli/repomanager.py -> build/bdist.linux-armv7l/wheel/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/configtest.py -> build/bdist.linux-armv7l/wheel/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/cli 2019-07-13T10:56:56 copying candig/server/cli/server.py -> build/bdist.linux-armv7l/wheel/candig/server/cli 2019-07-13T10:56:56 copying candig/server/config/client_secrets.json -> build/bdist.linux-armv7l/wheel/candig/server/config 2019-07-13T10:56:57 copying candig/server/static/dashboard.css -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/robots.txt -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/loader.css -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/spinner.gif -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/logo.png -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/output.swagger.json -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/favicon.ico -> build/bdist.linux-armv7l/wheel/candig/server/static 2019-07-13T10:56:57 copying candig/server/static/src/custom_visualization.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/src/patients_overview.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/src/gene_search.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/src/sample_analysis.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/src/global.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/src/dashboard.js -> build/bdist.linux-armv7l/wheel/candig/server/static/src 2019-07-13T10:56:57 copying candig/server/static/dist/custom_visualization.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/static/dist/patients_overview.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/static/dist/gene_search.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/static/dist/sample_analysis.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/static/dist/global.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/static/dist/dashboard.js -> build/bdist.linux-armv7l/wheel/candig/server/static/dist 2019-07-13T10:56:57 copying candig/server/repo/models.py -> build/bdist.linux-armv7l/wheel/candig/server/repo 2019-07-13T10:56:57 copying candig/server/repo/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/repo 2019-07-13T10:56:57 copying candig/server/repo/rnaseq2ga.py -> build/bdist.linux-armv7l/wheel/candig/server/repo 2019-07-13T10:56:57 copying candig/server/datamodel/genotype_phenotype.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/peers.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/bio_metadata.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/clinical_metadata.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/obo_parser.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/pipeline_metadata.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/continuous.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/ontologies.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/variants.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/genotype_phenotype_featureset.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/reads.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/datasets.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/rna_quantification.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/references.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/datamodel/sequence_annotations.py -> build/bdist.linux-armv7l/wheel/candig/server/datamodel 2019-07-13T10:56:57 copying candig/server/network/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/network 2019-07-13T10:56:57 copying candig/server/auth/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/auth 2019-07-13T10:56:57 copying candig/server/templates/gene_search.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/patients_overview.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/index.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/dashboard.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/spa.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/landing_message.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/initial_peers.txt -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/base.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/sample_analysis.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/__init__.py -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/swagger.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 copying candig/server/templates/custom_visualization.html -> build/bdist.linux-armv7l/wheel/candig/server/templates 2019-07-13T10:56:57 running install_egg_info 2019-07-13T10:56:57 Copying candig_server.egg-info to build/bdist.linux-armv7l/wheel/candig_server-1.0.0-py3.5.egg-info 2019-07-13T10:56:57 Installing build/bdist.linux-armv7l/wheel/candig_server-1.0.0-py3.5-nspkg.pth 2019-07-13T10:56:57 running install_scripts 2019-07-13T10:56:57 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2019-07-13T10:56:57 creating build/bdist.linux-armv7l/wheel/candig_server-1.0.0.dist-info/WHEEL 2019-07-13T10:56:57 creating '/tmp/pip-wheel-77lann3z/candig_server-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-13T10:56:57 adding 'candig_server-1.0.0-py3.5-nspkg.pth' 2019-07-13T10:56:57 adding 'candig/server/DP.py' 2019-07-13T10:56:57 adding 'candig/server/NCIT.py' 2019-07-13T10:56:57 adding 'candig/server/__init__.py' 2019-07-13T10:56:57 adding 'candig/server/_version.py' 2019-07-13T10:56:57 adding 'candig/server/backend.py' 2019-07-13T10:56:57 adding 'candig/server/configtest.py' 2019-07-13T10:56:57 adding 'candig/server/datarepo.py' 2019-07-13T10:56:57 adding 'candig/server/exceptions.py' 2019-07-13T10:56:57 adding 'candig/server/frontend.py' 2019-07-13T10:56:57 adding 'candig/server/gff3.py' 2019-07-13T10:56:57 adding 'candig/server/paging.py' 2019-07-13T10:56:57 adding 'candig/server/response_builder.py' 2019-07-13T10:56:57 adding 'candig/server/serverconfig.py' 2019-07-13T10:56:57 adding 'candig/server/sqlite_backend.py' 2019-07-13T10:56:57 adding 'candig/server/stuff.cfg' 2019-07-13T10:56:57 adding 'candig/server/auth/__init__.py' 2019-07-13T10:56:57 adding 'candig/server/cli/__init__.py' 2019-07-13T10:56:57 adding 'candig/server/cli/configtest.py' 2019-07-13T10:56:57 adding 'candig/server/cli/repomanager.py' 2019-07-13T10:56:57 adding 'candig/server/cli/server.py' 2019-07-13T10:56:58 adding 'candig/server/config/client_secrets.json' 2019-07-13T10:56:58 adding 'candig/server/datamodel/__init__.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/bio_metadata.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/clinical_metadata.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/continuous.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/datasets.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/genotype_phenotype.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/genotype_phenotype_featureset.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/obo_parser.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/ontologies.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/peers.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/pipeline_metadata.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/reads.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/references.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/rna_quantification.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/sequence_annotations.py' 2019-07-13T10:56:58 adding 'candig/server/datamodel/variants.py' 2019-07-13T10:56:58 adding 'candig/server/network/__init__.py' 2019-07-13T10:56:58 adding 'candig/server/repo/__init__.py' 2019-07-13T10:56:58 adding 'candig/server/repo/models.py' 2019-07-13T10:56:58 adding 'candig/server/repo/rnaseq2ga.py' 2019-07-13T10:56:58 adding 'candig/server/static/dashboard.css' 2019-07-13T10:56:58 adding 'candig/server/static/favicon.ico' 2019-07-13T10:56:58 adding 'candig/server/static/loader.css' 2019-07-13T10:56:58 adding 'candig/server/static/logo.png' 2019-07-13T10:56:58 adding 'candig/server/static/output.swagger.json' 2019-07-13T10:56:58 adding 'candig/server/static/robots.txt' 2019-07-13T10:56:58 adding 'candig/server/static/spinner.gif' 2019-07-13T10:56:58 adding 'candig/server/static/dist/custom_visualization.js' 2019-07-13T10:56:58 adding 'candig/server/static/dist/dashboard.js' 2019-07-13T10:56:58 adding 'candig/server/static/dist/gene_search.js' 2019-07-13T10:56:58 adding 'candig/server/static/dist/global.js' 2019-07-13T10:56:58 adding 'candig/server/static/dist/patients_overview.js' 2019-07-13T10:56:58 adding 'candig/server/static/dist/sample_analysis.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/custom_visualization.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/dashboard.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/gene_search.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/global.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/patients_overview.js' 2019-07-13T10:56:58 adding 'candig/server/static/src/sample_analysis.js' 2019-07-13T10:56:58 adding 'candig/server/templates/__init__.py' 2019-07-13T10:56:58 adding 'candig/server/templates/base.html' 2019-07-13T10:56:58 adding 'candig/server/templates/custom_visualization.html' 2019-07-13T10:56:58 adding 'candig/server/templates/dashboard.html' 2019-07-13T10:56:58 adding 'candig/server/templates/gene_search.html' 2019-07-13T10:56:58 adding 'candig/server/templates/index.html' 2019-07-13T10:56:58 adding 'candig/server/templates/initial_peers.txt' 2019-07-13T10:56:58 adding 'candig/server/templates/landing_message.html' 2019-07-13T10:56:58 adding 'candig/server/templates/patients_overview.html' 2019-07-13T10:56:58 adding 'candig/server/templates/sample_analysis.html' 2019-07-13T10:56:58 adding 'candig/server/templates/spa.html' 2019-07-13T10:56:58 adding 'candig/server/templates/swagger.html' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/LICENSE' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/METADATA' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/WHEEL' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/entry_points.txt' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/namespace_packages.txt' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/top_level.txt' 2019-07-13T10:56:58 adding 'candig_server-1.0.0.dist-info/RECORD' 2019-07-13T10:56:58 removing build/bdist.linux-armv7l/wheel 2019-07-13T10:56:58 Building wheel for candig-server (setup.py): finished with status 'done' 2019-07-13T10:56:58 Stored in directory: /tmp/tmpj93nlm6c 2019-07-13T10:56:58 Successfully built candig-server 2019-07-13T10:56:58 Cleaning up... 2019-07-13T10:56:58 Removing source in /tmp/pip-wheel-3befa6m2/candig-server 2019-07-13T10:56:59 Removed build tracker '/tmp/pip-req-tracker-1vo1bc77'