2019-07-14T04:33:03 Created temporary directory: /tmp/pip-ephem-wheel-cache-wx87739n
2019-07-14T04:33:03 Created temporary directory: /tmp/pip-req-tracker-911_bt2l
2019-07-14T04:33:03 Created requirements tracker '/tmp/pip-req-tracker-911_bt2l'
2019-07-14T04:33:03 Created temporary directory: /tmp/pip-wheel-t_11bt09
2019-07-14T04:33:03 Collecting vdj==1.6.0
2019-07-14T04:33:03   1 location(s) to search for versions of vdj:
2019-07-14T04:33:03   * https://pypi.org/simple/vdj/
2019-07-14T04:33:03   Getting page https://pypi.org/simple/vdj/
2019-07-14T04:33:03   Analyzing links from page https://pypi.org/simple/vdj/
2019-07-14T04:33:03     Skipping link https://files.pythonhosted.org/packages/3f/b0/9de2ad4b7c774ae349afb2d2bf301eafd0e0f04b7c13bedff7e99f182a9a/vdj-1.6.0-py2.7-macosx-10.10-x86_64.egg#sha256=761118cca6719bc004d819affd07982775d925db549cca2c47c57d0a4eccda6f (from https://pypi.org/simple/vdj/); unsupported archive format: .egg
2019-07-14T04:33:03     Found link https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz#sha256=9fafdc1d8308ddcf051290506cf214b19d793828189a9c0949958dc6feeecf25 (from https://pypi.org/simple/vdj/), version: 1.6.0
2019-07-14T04:33:03   Using version 1.6.0 (newest of versions: 1.6.0)
2019-07-14T04:33:03   Created temporary directory: /tmp/pip-unpack-xt7utuaf
2019-07-14T04:33:04   Downloading https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz
2019-07-14T04:33:04   Downloading from URL https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz#sha256=9fafdc1d8308ddcf051290506cf214b19d793828189a9c0949958dc6feeecf25 (from https://pypi.org/simple/vdj/)
2019-07-14T04:33:04   Added vdj==1.6.0 from https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz#sha256=9fafdc1d8308ddcf051290506cf214b19d793828189a9c0949958dc6feeecf25 to build tracker '/tmp/pip-req-tracker-911_bt2l'
2019-07-14T04:33:04     Running setup.py (path:/tmp/pip-wheel-t_11bt09/vdj/setup.py) egg_info for package vdj
2019-07-14T04:33:04     Running command python setup.py egg_info
2019-07-14T04:33:06     running egg_info
2019-07-14T04:33:06     creating pip-egg-info/vdj.egg-info
2019-07-14T04:33:06     writing pip-egg-info/vdj.egg-info/PKG-INFO
2019-07-14T04:33:06     writing dependency_links to pip-egg-info/vdj.egg-info/dependency_links.txt
2019-07-14T04:33:06     writing top-level names to pip-egg-info/vdj.egg-info/top_level.txt
2019-07-14T04:33:06     writing manifest file 'pip-egg-info/vdj.egg-info/SOURCES.txt'
2019-07-14T04:33:06     reading manifest file 'pip-egg-info/vdj.egg-info/SOURCES.txt'
2019-07-14T04:33:06     writing manifest file 'pip-egg-info/vdj.egg-info/SOURCES.txt'
2019-07-14T04:33:06   Source in /tmp/pip-wheel-t_11bt09/vdj has version 1.6.0, which satisfies requirement vdj==1.6.0 from https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz#sha256=9fafdc1d8308ddcf051290506cf214b19d793828189a9c0949958dc6feeecf25
2019-07-14T04:33:06   Removed vdj==1.6.0 from https://files.pythonhosted.org/packages/76/03/c13812526b84e4a67940d38db16ba1c901bcd0494e16b89526296e3b054f/vdj-1.6.0.tar.gz#sha256=9fafdc1d8308ddcf051290506cf214b19d793828189a9c0949958dc6feeecf25 from build tracker '/tmp/pip-req-tracker-911_bt2l'
2019-07-14T04:33:06 Building wheels for collected packages: vdj
2019-07-14T04:33:06   Created temporary directory: /tmp/pip-wheel-zi_ktxuj
2019-07-14T04:33:06   Building wheel for vdj (setup.py): started
2019-07-14T04:33:06   Destination directory: /tmp/pip-wheel-zi_ktxuj
2019-07-14T04:33:06   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-t_11bt09/vdj/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zi_ktxuj
2019-07-14T04:33:08   running bdist_wheel
2019-07-14T04:33:08   running build
2019-07-14T04:33:08   running build_ext
2019-07-14T04:33:09   building 'alignmentcore' extension
2019-07-14T04:33:09   C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

2019-07-14T04:33:09   creating build
2019-07-14T04:33:09   creating build/temp.linux-armv7l-3.7
2019-07-14T04:33:09   compile options: '-I/home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c'
2019-07-14T04:33:09   arm-linux-gnueabihf-gcc: alignmentcore.c
2019-07-14T04:33:09   In file included from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2019-07-14T04:33:09                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-07-14T04:33:09                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-07-14T04:33:09                    from alignmentcore.c:18:
2019-07-14T04:33:09   /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-07-14T04:33:09    #warning "Using deprecated NumPy API, disable it with " \
2019-07-14T04:33:09     ^~~~~~~
2019-07-14T04:33:09   alignmentcore.c: In function ‘initalignmentcore’:
2019-07-14T04:33:09   alignmentcore.c:192:5: warning: implicit declaration of function ‘Py_InitModule’; did you mean ‘Py_Initialize’? [-Wimplicit-function-declaration]
2019-07-14T04:33:09        Py_InitModule( "alignmentcore", alignmentcoremethods ) ;
2019-07-14T04:33:09        ^~~~~~~~~~~~~
2019-07-14T04:33:09        Py_Initialize
2019-07-14T04:33:09   alignmentcore.c:193:5: warning: ‘return’ with a value, in function returning void
2019-07-14T04:33:09        import_array();
2019-07-14T04:33:09        ^~~~~~~~~~~~
2019-07-14T04:33:09   alignmentcore.c:191:6: note: declared here
2019-07-14T04:33:09    void initalignmentcore() {
2019-07-14T04:33:09         ^~~~~~~~~~~~~~~~~
2019-07-14T04:33:10   creating build/lib.linux-armv7l-3.7
2019-07-14T04:33:10   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/alignmentcore.o -o build/lib.linux-armv7l-3.7/alignmentcore.cpython-37m-arm-linux-gnueabihf.so
2019-07-14T04:33:10   building 'clusteringcore' extension
2019-07-14T04:33:10   C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

2019-07-14T04:33:10   compile options: '-I/home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c'
2019-07-14T04:33:10   arm-linux-gnueabihf-gcc: clusteringcore.c
2019-07-14T04:33:10   In file included from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2019-07-14T04:33:10                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-07-14T04:33:10                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-07-14T04:33:10                    from clusteringcore.c:21:
2019-07-14T04:33:10   /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-07-14T04:33:10    #warning "Using deprecated NumPy API, disable it with " \
2019-07-14T04:33:10     ^~~~~~~
2019-07-14T04:33:11   clusteringcore.c: In function ‘initclusteringcore’:
2019-07-14T04:33:11   clusteringcore.c:93:5: warning: implicit declaration of function ‘Py_InitModule’; did you mean ‘Py_Initialize’? [-Wimplicit-function-declaration]
2019-07-14T04:33:11        Py_InitModule( "clusteringcore", clusteringcoremethods ) ;
2019-07-14T04:33:11        ^~~~~~~~~~~~~
2019-07-14T04:33:11        Py_Initialize
2019-07-14T04:33:11   clusteringcore.c:95:1: warning: control reaches end of non-void function [-Wreturn-type]
2019-07-14T04:33:11    }
2019-07-14T04:33:11    ^
2019-07-14T04:33:11   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/clusteringcore.o -o build/lib.linux-armv7l-3.7/clusteringcore.cpython-37m-arm-linux-gnueabihf.so
2019-07-14T04:33:11   installing to build/bdist.linux-armv7l/wheel
2019-07-14T04:33:11   running install
2019-07-14T04:33:11   running install_lib
2019-07-14T04:33:11   creating build/bdist.linux-armv7l
2019-07-14T04:33:11   creating build/bdist.linux-armv7l/wheel
2019-07-14T04:33:11   copying build/lib.linux-armv7l-3.7/clusteringcore.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2019-07-14T04:33:11   copying build/lib.linux-armv7l-3.7/alignmentcore.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2019-07-14T04:33:11   running install_egg_info
2019-07-14T04:33:11   running egg_info
2019-07-14T04:33:11   writing vdj.egg-info/PKG-INFO
2019-07-14T04:33:11   writing dependency_links to vdj.egg-info/dependency_links.txt
2019-07-14T04:33:11   writing top-level names to vdj.egg-info/top_level.txt
2019-07-14T04:33:11   reading manifest file 'vdj.egg-info/SOURCES.txt'
2019-07-14T04:33:11   writing manifest file 'vdj.egg-info/SOURCES.txt'
2019-07-14T04:33:11   Copying vdj.egg-info to build/bdist.linux-armv7l/wheel/vdj-1.6.0-py3.7.egg-info
2019-07-14T04:33:11   running install_scripts
2019-07-14T04:33:11   creating build/bdist.linux-armv7l/wheel/vdj-1.6.0.dist-info/WHEEL
2019-07-14T04:33:11   creating '/tmp/pip-wheel-zi_ktxuj/vdj-1.6.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-14T04:33:11   adding 'alignmentcore.cpython-37m-arm-linux-gnueabihf.so'
2019-07-14T04:33:11   adding 'clusteringcore.cpython-37m-arm-linux-gnueabihf.so'
2019-07-14T04:33:11   adding 'vdj-1.6.0.dist-info/METADATA'
2019-07-14T04:33:11   adding 'vdj-1.6.0.dist-info/WHEEL'
2019-07-14T04:33:11   adding 'vdj-1.6.0.dist-info/top_level.txt'
2019-07-14T04:33:11   adding 'vdj-1.6.0.dist-info/RECORD'
2019-07-14T04:33:11   removing build/bdist.linux-armv7l/wheel
2019-07-14T04:33:11   Building wheel for vdj (setup.py): finished with status 'done'
2019-07-14T04:33:11   Stored in directory: /tmp/tmpfph0fbxi
2019-07-14T04:33:11 Successfully built vdj
2019-07-14T04:33:11 Cleaning up...
2019-07-14T04:33:11   Removing source in /tmp/pip-wheel-t_11bt09/vdj
2019-07-14T04:33:11 Removed build tracker '/tmp/pip-req-tracker-911_bt2l'