2019-07-14T14:48:07 Created temporary directory: /tmp/pip-ephem-wheel-cache-i6pp5et7
2019-07-14T14:48:07 Created temporary directory: /tmp/pip-req-tracker-z2weu5qj
2019-07-14T14:48:07 Created requirements tracker '/tmp/pip-req-tracker-z2weu5qj'
2019-07-14T14:48:07 Created temporary directory: /tmp/pip-wheel-i33s35mk
2019-07-14T14:48:07 Collecting arv==0.7
2019-07-14T14:48:07   1 location(s) to search for versions of arv:
2019-07-14T14:48:07   * https://pypi.org/simple/arv/
2019-07-14T14:48:07   Getting page https://pypi.org/simple/arv/
2019-07-14T14:48:07   Analyzing links from page https://pypi.org/simple/arv/
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/79/cb/d0a432e6bee84946f2a99c6e1c18757519d9a29a8a93e5cec5a4c6ec0b13/arv-0.1-cp27-cp27m-macosx_10_12_x86_64.whl#sha256=52a3ce894f552d52dd990f3b75cb880de8cf20291a44547cc245c378e003d229 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/28/bf/8f39399e129e77e88084cd6553ed5b02132404fa5aa7953ec357cd53824c/arv-0.1.tar.gz#sha256=3c24d882dad79a0690f69f7bde6e09808616a88d688d0b167bddf2443b0392d7 (from https://pypi.org/simple/arv/), version: 0.1
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/d1/d1/be5f1eb8ad00dbf7128d7c698fe2c3d3aac06329d6d2564fa33fac4d81cb/arv-0.2-cp27-cp27m-macosx_10_12_x86_64.whl#sha256=43eaa8c3ffda637c2c45185e2be009dc547a4d86df7d62e786b02150015b2d36 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/c1/48/5c084fc21937e4cde5752d10c4b4e123e6a24df37c4acf8cce4dabf00258/arv-0.2.tar.gz#sha256=0b849c4d1edf13695ca6bd6228f8c2710f66f04375f7c783b565184b34cd0b25 (from https://pypi.org/simple/arv/), version: 0.2
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/85/fc/ef4dda5805f022dd0766af26ebb943a8671283f3e5ce1119dff6d45200c0/arv-0.3-cp27-cp27m-macosx_10_12_x86_64.whl#sha256=b3215b19f9cdccd629bfaa34b3c3d4909350155523596026909176466ffbeaef (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/d2/f2/c62af9993167d6dcea891d55f368f70455ec0bb99137ee3cb1e144cd50e4/arv-0.3.tar.gz#sha256=40af0f415df5ee85267f80a07b9750b427a32b31937e0b7f29b80532c98a14c5 (from https://pypi.org/simple/arv/), version: 0.3
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/82/41/a607266511cfc54d7c07527c81d2a0730b07af7eab1d93accb5ca993f08c/arv-0.4-cp27-none-macosx_10_12_intel.whl#sha256=d95f4f72c815376124abf42d2bbdcc4b5d77c6a94c73d184cacfc613e5254b67 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/e0/ed/4f466615e32e971598cf6cceefaf01c8b3b65c50c3e1fbc2481dde289ac8/arv-0.4.tar.gz#sha256=2d6cb7d7578b5af3bdcb1191d146a391901eff84a2a6d4457c12132735063fcc (from https://pypi.org/simple/arv/), version: 0.4
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/65/0e/997a9d6bc4eaa38b1bf96da00e4907d04fefc3ce74e8664ed6cbe90d3697/arv-0.5-cp27-none-macosx_10_12_intel.whl#sha256=97286f75a938a7d67cb979633fd1ebdd38764f25cb7df469d168df377c9c2148 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/37/da/f94035a93931c4826d92cb348d6c8267186e2f5e1a12843a7ab25afe2c47/arv-0.5.tar.gz#sha256=6485db9fd4f8061f803e2210e11a70b2d41794d832cfe104850a7ab85b948475 (from https://pypi.org/simple/arv/), version: 0.5
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/8b/3c/411121f0b0b76e07dc693603a3c270b3608ee4d30813fefd1c3d7e809cf2/arv-0.6-cp27-none-macosx_10_12_intel.whl#sha256=8ecfd7a688494bbd008a10cb8d3f8002b871aab416ce9e15ec3f4f6b27206be0 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/b3/85/ab31b736c04773e7ce875239145aaabc24de00de512baf674c6f6b5a12e9/arv-0.6.tar.gz#sha256=cf238c0d49e096e583b030db9b657e881796b833d39db1ec852081f290e098b7 (from https://pypi.org/simple/arv/), version: 0.6
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/54/f8/f43e9bb124f4862e39d7510a1456a57e9cb8be843a99effd466a5ee9287c/arv-0.7-cp27-none-macosx_10_12_intel.whl#sha256=dbe3652b04c29e1722c7bb498f115e3825dee697df587a4311f1f819f08aefcf (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz#sha256=12c5c0b877bf42f2e672bd6f0b94ab6a948d71cb7b86f9204a334c11e788815c (from https://pypi.org/simple/arv/), version: 0.7
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/a9/5b/efef04f913f5de9c7d612f80e702b03982dba0c38c665fa237247aaf5e18/arv-0.8-cp27-none-macosx_10_12_intel.whl#sha256=377cc24d06aa83dcd98775ab04afcf8230b206badcca0169d33755e6b9e3cbd2 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/89/13/53bc0c6ed04333128a2a85f910fed8a0e65505fb89d181ff41571161c452/arv-0.8.tar.gz#sha256=68b8ca757d93948d916d9da9079fa566b7d67febb7f97b7e350d95a4d16feab6 (from https://pypi.org/simple/arv/), version: 0.8
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/d9/4a/0f9909c577bb6d493ad082a187bc37820385cf0f4b94ae745d54dc5f1604/arv-0.9-cp27-none-macosx_10_12_intel.whl#sha256=1fd9d719c886402b6addc302cf272cbac502ad75f63eb40fb9b1edf6fe22cfab (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/ce/90/aa9cb9012bf7fc3671ccad13625521ddd73e53b355ab216c5e1ad40eaa9c/arv-0.9.tar.gz#sha256=d400184df756e43f5bb9e76378d467da60332a5256aa8d963a7710ae38b6a075 (from https://pypi.org/simple/arv/), version: 0.9
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/98/5c/34d34db646d1caf1f55deadb4b8784dc1ed21e46f20870648eec5a0491de/arv-0.9.1-cp27-none-macosx_10_12_intel.whl#sha256=d2217821ff98165e693352534037c5d233acc31c764bd7ee36a3c38e348ade15 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/d5/19/75a16aade4d435627c8bfa78193eb14bdfe7c8aec3529de79a762c8f48cf/arv-0.9.1.tar.gz#sha256=a2dc2f7668014286cb9a89de81291cefa26d40730a736852eb1d2ffe1a103ca1 (from https://pypi.org/simple/arv/), version: 0.9.1
2019-07-14T14:48:07     Skipping link https://files.pythonhosted.org/packages/bc/09/e5e0750e2c608003861780d4807726937bdfca6bc5ab1ea04532cbef8dd8/arv-0.9.2-cp27-none-macosx_10_12_intel.whl#sha256=c44aaef6d06584a378d353b6408c10adba17331c7eb26e9790c3c37bceb4f041 (from https://pypi.org/simple/arv/); it is not compatible with this Python
2019-07-14T14:48:07     Found link https://files.pythonhosted.org/packages/c2/6a/7198d7adcb9e5f90080c5f2e0bd9dced045f174dd809267b626278995b67/arv-0.9.2.tar.gz#sha256=7cda7fbc1175e0e8bd19b3d4be4208cbfb72f7c554c51ac41f46ce7b51ee40f9 (from https://pypi.org/simple/arv/), version: 0.9.2
2019-07-14T14:48:07   Using version 0.7 (newest of versions: 0.7)
2019-07-14T14:48:07   Created temporary directory: /tmp/pip-unpack-dtha1oqu
2019-07-14T14:48:07   Downloading https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz (263kB)
2019-07-14T14:48:07   Downloading from URL https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz#sha256=12c5c0b877bf42f2e672bd6f0b94ab6a948d71cb7b86f9204a334c11e788815c (from https://pypi.org/simple/arv/)
2019-07-14T14:48:08   Added arv==0.7 from https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz#sha256=12c5c0b877bf42f2e672bd6f0b94ab6a948d71cb7b86f9204a334c11e788815c to build tracker '/tmp/pip-req-tracker-z2weu5qj'
2019-07-14T14:48:08     Running setup.py (path:/tmp/pip-wheel-i33s35mk/arv/setup.py) egg_info for package arv
2019-07-14T14:48:08     Running command python setup.py egg_info
2019-07-14T14:48:10     running egg_info
2019-07-14T14:48:10     creating pip-egg-info/arv.egg-info
2019-07-14T14:48:10     writing pip-egg-info/arv.egg-info/PKG-INFO
2019-07-14T14:48:10     writing dependency_links to pip-egg-info/arv.egg-info/dependency_links.txt
2019-07-14T14:48:10     writing requirements to pip-egg-info/arv.egg-info/requires.txt
2019-07-14T14:48:13     Compiling cython/_arv.pyx because it depends on /usr/lib/python3/dist-packages/Cython/Includes/libcpp/vector.pxd.
2019-07-14T14:48:13     [1/1] Cythonizing cython/_arv.pyx
2019-07-14T14:48:13     writing top-level names to pip-egg-info/arv.egg-info/top_level.txt
2019-07-14T14:48:13     writing manifest file 'pip-egg-info/arv.egg-info/SOURCES.txt'
2019-07-14T14:48:13     reading manifest file 'pip-egg-info/arv.egg-info/SOURCES.txt'
2019-07-14T14:48:13     reading manifest template 'MANIFEST.in'
2019-07-14T14:48:13     writing manifest file 'pip-egg-info/arv.egg-info/SOURCES.txt'
2019-07-14T14:48:13     Error processing line 1 of /home/piwheels/.local/lib/python3.7/site-packages/zzz_register_dansk_encoding.pth:

2019-07-14T14:48:13       Traceback (most recent call last):
2019-07-14T14:48:13         File "/usr/lib/python3.7/site.py", line 174, in addpackage
2019-07-14T14:48:13           exec(line)
2019-07-14T14:48:13         File "<string>", line 1, in <module>
2019-07-14T14:48:13       ModuleNotFoundError: No module named 'dansk'

2019-07-14T14:48:13     Remainder of file ignored
2019-07-14T14:48:13     /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-i33s35mk/arv/cython/_arv.pyx
2019-07-14T14:48:13       tree = Parsing.p_module(s, pxd, full_module_name)
2019-07-14T14:48:13   Source in /tmp/pip-wheel-i33s35mk/arv has version 0.7, which satisfies requirement arv==0.7 from https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz#sha256=12c5c0b877bf42f2e672bd6f0b94ab6a948d71cb7b86f9204a334c11e788815c
2019-07-14T14:48:13   Removed arv==0.7 from https://files.pythonhosted.org/packages/cf/48/021558e12082f4fc32ab980a52b569719d440167866aa0ded82c3714bcc1/arv-0.7.tar.gz#sha256=12c5c0b877bf42f2e672bd6f0b94ab6a948d71cb7b86f9204a334c11e788815c from build tracker '/tmp/pip-req-tracker-z2weu5qj'
2019-07-14T14:48:13 Building wheels for collected packages: arv
2019-07-14T14:48:13   Created temporary directory: /tmp/pip-wheel-rqh9_w6_
2019-07-14T14:48:13   Building wheel for arv (setup.py): started
2019-07-14T14:48:13   Destination directory: /tmp/pip-wheel-rqh9_w6_
2019-07-14T14:48:13   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-i33s35mk/arv/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rqh9_w6_
2019-07-14T14:48:13   Error processing line 1 of /home/piwheels/.local/lib/python3.7/site-packages/zzz_register_dansk_encoding.pth:

2019-07-14T14:48:14     Traceback (most recent call last):
2019-07-14T14:48:14       File "/usr/lib/python3.7/site.py", line 174, in addpackage
2019-07-14T14:48:14         exec(line)
2019-07-14T14:48:14       File "<string>", line 1, in <module>
2019-07-14T14:48:14     ModuleNotFoundError: No module named 'dansk'

2019-07-14T14:48:14   Remainder of file ignored
2019-07-14T14:48:15   running bdist_wheel
2019-07-14T14:48:16   running build
2019-07-14T14:48:16   running build_py
2019-07-14T14:48:17   creating build
2019-07-14T14:48:17   creating build/lib.linux-armv7l-3.7
2019-07-14T14:48:17   creating build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   copying arv/util.py -> build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   copying arv/match.py -> build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   copying arv/traits.py -> build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   copying arv/__main__.py -> build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   copying arv/__init__.py -> build/lib.linux-armv7l-3.7/arv
2019-07-14T14:48:17   running build_ext
2019-07-14T14:48:17   Configuring Google hash map
2019-07-14T14:48:18   checking for a BSD-compatible install... /usr/bin/install -c
2019-07-14T14:48:19   checking whether build environment is sane... yes
2019-07-14T14:48:19   checking for a thread-safe mkdir -p... /bin/mkdir -p
2019-07-14T14:48:19   checking for gawk... gawk
2019-07-14T14:48:20   checking whether make sets $(MAKE)... yes
2019-07-14T14:48:20   checking for g++... g++
2019-07-14T14:48:20   checking whether the C++ compiler works... yes
2019-07-14T14:48:20   checking for C++ compiler default output file name... a.out
2019-07-14T14:48:21   checking for suffix of executables...
2019-07-14T14:48:22   checking whether we are cross compiling... no
2019-07-14T14:48:22   checking for suffix of object files... o
2019-07-14T14:48:22   checking whether we are using the GNU C++ compiler... yes
2019-07-14T14:48:22   checking whether g++ accepts -g... yes
2019-07-14T14:48:22   checking for style of include used by make... GNU
2019-07-14T14:48:23   checking dependency style of g++... gcc3
2019-07-14T14:48:23   checking for gcc... gcc
2019-07-14T14:48:23   checking whether we are using the GNU C compiler... yes
2019-07-14T14:48:23   checking whether gcc accepts -g... yes
2019-07-14T14:48:24   checking for gcc option to accept ISO C89... none needed
2019-07-14T14:48:24   checking dependency style of gcc... gcc3
2019-07-14T14:48:24   checking how to run the C preprocessor... gcc -E
2019-07-14T14:48:25   checking for grep that handles long lines and -e... /bin/grep
2019-07-14T14:48:25   checking for egrep... /bin/grep -E
2019-07-14T14:48:26   checking for ANSI C header files... yes
2019-07-14T14:48:26   checking for memcpy... yes
2019-07-14T14:48:26   checking for memmove... yes
2019-07-14T14:48:27   checking for sys/types.h... yes
2019-07-14T14:48:27   checking for sys/stat.h... yes
2019-07-14T14:48:27   checking for stdlib.h... yes
2019-07-14T14:48:28   checking for string.h... yes
2019-07-14T14:48:28   checking for memory.h... yes
2019-07-14T14:48:28   checking for strings.h... yes
2019-07-14T14:48:29   checking for inttypes.h... yes
2019-07-14T14:48:29   checking for stdint.h... yes
2019-07-14T14:48:29   checking for unistd.h... yes
2019-07-14T14:48:30   checking for uint16_t... yes
2019-07-14T14:48:31   checking for u_int16_t... yes
2019-07-14T14:48:31   checking for __uint16... no
2019-07-14T14:48:31   checking for long long... yes
2019-07-14T14:48:32   checking sys/resource.h usability... yes
2019-07-14T14:48:32   checking sys/resource.h presence... yes
2019-07-14T14:48:32   checking for sys/resource.h... yes
2019-07-14T14:48:32   checking for unistd.h... (cached) yes
2019-07-14T14:48:32   checking sys/time.h usability... yes
2019-07-14T14:48:32   checking sys/time.h presence... yes
2019-07-14T14:48:32   checking for sys/time.h... yes
2019-07-14T14:48:33   checking sys/utsname.h usability... yes
2019-07-14T14:48:33   checking sys/utsname.h presence... yes
2019-07-14T14:48:33   checking for sys/utsname.h... yes
2019-07-14T14:48:33   checking how to run the C++ preprocessor... g++ -E
2019-07-14T14:48:34   checking google/malloc_extension.h usability... no
2019-07-14T14:48:34   checking google/malloc_extension.h presence... no
2019-07-14T14:48:34   checking for google/malloc_extension.h... no
2019-07-14T14:48:34   checking whether the compiler implements namespaces... yes
2019-07-14T14:48:36   checking the location of hash_map... <unordered_map>
2019-07-14T14:48:38   checking how to include hash_fun directly... <functional>
2019-07-14T14:48:38   configure: creating ./config.status
2019-07-14T14:48:39   config.status: creating Makefile
2019-07-14T14:48:39   config.status: creating src/config.h
2019-07-14T14:48:39   config.status: executing depfiles commands
2019-07-14T14:48:40   building '_arv' extension
2019-07-14T14:48:40   creating build/temp.linux-armv7l-3.7
2019-07-14T14:48:40   creating build/temp.linux-armv7l-3.7/cython
2019-07-14T14:48:40   creating build/temp.linux-armv7l-3.7/cpp
2019-07-14T14:48:40   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cython/_arv.cpp -o build/temp.linux-armv7l-3.7/cython/_arv.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:48:51   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cpp/arv.cpp -o build/temp.linux-armv7l-3.7/cpp/arv.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:48:54   In file included from cpp/sparsehash/internal/densehashtable.h:101,
2019-07-14T14:48:54                    from cpp/sparsehash/dense_hash_map:104,
2019-07-14T14:48:54                    from cpp/google/dense_hash_map:34,
2019-07-14T14:48:54                    from cpp/arv.cpp:11:
2019-07-14T14:48:54   cpp/sparsehash/internal/libc_allocator_with_realloc.h: In instantiation of ‘T* google::libc_allocator_with_realloc<T>::reallocate(google::libc_allocator_with_realloc<T>::pointer, google::libc_allocator_with_realloc<T>::size_type) [with T = std::pair<const int, arv::SNP>; google::libc_allocator_with_realloc<T>::pointer = std::pair<const int, arv::SNP>*; google::libc_allocator_with_realloc<T>::size_type = unsigned int]’:
2019-07-14T14:48:54   cpp/sparsehash/internal/densehashtable.h:1202:15:   required from ‘google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::pointer google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::realloc_or_die(google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::pointer, google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::size_type) [with A = std::pair<const int, arv::SNP>; Value = std::pair<const int, arv::SNP>; Key = int; HashFcn = {anonymous}::RSIDHash; ExtractKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SelectKey; SetKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SetKey; EqualKey = {anonymous}::RSIDEq; Alloc = google::libc_allocator_with_realloc<std::pair<const int, arv::SNP> >; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::pointer = std::pair<const int, arv::SNP>*; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::alloc_impl<google::libc_allocator_with_realloc<U> >::size_type = unsigned int]’
2019-07-14T14:48:54   cpp/sparsehash/internal/densehashtable.h:628:11:   required from ‘void google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::resize_table(google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type, google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type, google::true_type) [with Value = std::pair<const int, arv::SNP>; Key = int; HashFcn = {anonymous}::RSIDHash; ExtractKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SelectKey; SetKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SetKey; EqualKey = {anonymous}::RSIDEq; Alloc = google::libc_allocator_with_realloc<std::pair<const int, arv::SNP> >; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type = unsigned int; google::true_type = google::integral_constant<bool, true>]’
2019-07-14T14:48:54   cpp/sparsehash/internal/densehashtable.h:785:9:   required from ‘void google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::clear_to_size(google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type) [with Value = std::pair<const int, arv::SNP>; Key = int; HashFcn = {anonymous}::RSIDHash; ExtractKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SelectKey; SetKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SetKey; EqualKey = {anonymous}::RSIDEq; Alloc = google::libc_allocator_with_realloc<std::pair<const int, arv::SNP> >; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type = unsigned int]’
2019-07-14T14:48:54   cpp/sparsehash/internal/densehashtable.h:638:5:   required from ‘void google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::copy_from(const google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>&, google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type) [with Value = std::pair<const int, arv::SNP>; Key = int; HashFcn = {anonymous}::RSIDHash; ExtractKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SelectKey; SetKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SetKey; EqualKey = {anonymous}::RSIDEq; Alloc = google::libc_allocator_with_realloc<std::pair<const int, arv::SNP> >; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type = unsigned int]’
2019-07-14T14:48:54   cpp/sparsehash/internal/densehashtable.h:729:5:   required from ‘google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::dense_hashtable(const google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>&, google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type) [with Value = std::pair<const int, arv::SNP>; Key = int; HashFcn = {anonymous}::RSIDHash; ExtractKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SelectKey; SetKey = google::dense_hash_map<int, arv::SNP, {anonymous}::RSIDHash, {anonymous}::RSIDEq>::SetKey; EqualKey = {anonymous}::RSIDEq; Alloc = google::libc_allocator_with_realloc<std::pair<const int, arv::SNP> >; google::dense_hashtable<Value, Key, HashFcn, ExtractKey, SetKey, EqualKey, Alloc>::size_type = unsigned int]’
2019-07-14T14:48:54   cpp/sparsehash/dense_hash_map:113:7:   required from here
2019-07-14T14:48:54   cpp/sparsehash/internal/libc_allocator_with_realloc.h:68:40: warning: ‘void* realloc(void*, size_t)’ moving an object of non-trivially copyable type ‘struct std::pair<const int, arv::SNP>’; use ‘new’ and ‘delete’ instead [-Wclass-memaccess]
2019-07-14T14:48:54        return static_cast<pointer>(realloc(p, n * sizeof(value_type)));
2019-07-14T14:48:54                                    ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2019-07-14T14:48:54   In file included from /usr/include/c++/8/utility:70,
2019-07-14T14:48:54                    from /usr/include/c++/8/algorithm:60,
2019-07-14T14:48:54                    from cpp/sparsehash/dense_hash_map:100,
2019-07-14T14:48:54                    from cpp/google/dense_hash_map:34,
2019-07-14T14:48:54                    from cpp/arv.cpp:11:
2019-07-14T14:48:54   /usr/include/c++/8/bits/stl_pair.h:208:12: note: ‘struct std::pair<const int, arv::SNP>’ declared here
2019-07-14T14:48:54        struct pair
2019-07-14T14:48:54               ^~~~
2019-07-14T14:48:57   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cpp/file.cpp -o build/temp.linux-armv7l-3.7/cpp/file.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:48:58   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cpp/filesize.cpp -o build/temp.linux-armv7l-3.7/cpp/filesize.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:49:00   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cpp/mmap.cpp -o build/temp.linux-armv7l-3.7/cpp/mmap.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:49:01   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Icpp -I/usr/include/python3.7m -c cpp/parse.cpp -o build/temp.linux-armv7l-3.7/cpp/parse.o --std=c++11 -DBUILDING_DLL -W -Wall -march=native -mtune=native -O2 -g0 -fvisibility=hidden -include cpp/public_py_init_sym.hpp
2019-07-14T14:49:03   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/cython/_arv.o build/temp.linux-armv7l-3.7/cpp/arv.o build/temp.linux-armv7l-3.7/cpp/file.o build/temp.linux-armv7l-3.7/cpp/filesize.o build/temp.linux-armv7l-3.7/cpp/mmap.o build/temp.linux-armv7l-3.7/cpp/parse.o -o build/lib.linux-armv7l-3.7/_arv.cpython-37m-arm-linux-gnueabihf.so -Wl,-s
2019-07-14T14:49:04   installing to build/bdist.linux-armv7l/wheel
2019-07-14T14:49:04   running install
2019-07-14T14:49:04   running install_lib
2019-07-14T14:49:04   creating build/bdist.linux-armv7l
2019-07-14T14:49:04   creating build/bdist.linux-armv7l/wheel
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/_arv.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2019-07-14T14:49:04   creating build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/arv/util.py -> build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/arv/match.py -> build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/arv/traits.py -> build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/arv/__main__.py -> build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   copying build/lib.linux-armv7l-3.7/arv/__init__.py -> build/bdist.linux-armv7l/wheel/arv
2019-07-14T14:49:04   running install_egg_info
2019-07-14T14:49:04   running egg_info
2019-07-14T14:49:04   writing arv.egg-info/PKG-INFO
2019-07-14T14:49:04   writing dependency_links to arv.egg-info/dependency_links.txt
2019-07-14T14:49:04   writing requirements to arv.egg-info/requires.txt
2019-07-14T14:49:04   writing top-level names to arv.egg-info/top_level.txt
2019-07-14T14:49:04   reading manifest file 'arv.egg-info/SOURCES.txt'
2019-07-14T14:49:04   reading manifest template 'MANIFEST.in'
2019-07-14T14:49:04   writing manifest file 'arv.egg-info/SOURCES.txt'
2019-07-14T14:49:04   Copying arv.egg-info to build/bdist.linux-armv7l/wheel/arv-0.7-py3.7.egg-info
2019-07-14T14:49:04   running install_scripts
2019-07-14T14:49:04   adding license file "LICENSES" (matched pattern "LICEN[CS]E*")
2019-07-14T14:49:04   adding license file "COPYING" (matched pattern "COPYING*")
2019-07-14T14:49:04   creating build/bdist.linux-armv7l/wheel/arv-0.7.dist-info/WHEEL
2019-07-14T14:49:04   creating '/tmp/pip-wheel-rqh9_w6_/arv-0.7-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-14T14:49:04   adding '_arv.cpython-37m-arm-linux-gnueabihf.so'
2019-07-14T14:49:04   adding 'arv/__init__.py'
2019-07-14T14:49:04   adding 'arv/__main__.py'
2019-07-14T14:49:04   adding 'arv/match.py'
2019-07-14T14:49:04   adding 'arv/traits.py'
2019-07-14T14:49:04   adding 'arv/util.py'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/COPYING'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/LICENSES'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/METADATA'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/WHEEL'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/top_level.txt'
2019-07-14T14:49:04   adding 'arv-0.7.dist-info/RECORD'
2019-07-14T14:49:04   removing build/bdist.linux-armv7l/wheel
2019-07-14T14:49:04   Building wheel for arv (setup.py): finished with status 'done'
2019-07-14T14:49:04   Stored in directory: /tmp/tmp951la_e7
2019-07-14T14:49:04 Successfully built arv
2019-07-14T14:49:04 Cleaning up...
2019-07-14T14:49:04   Removing source in /tmp/pip-wheel-i33s35mk/arv
2019-07-14T14:49:05 Removed build tracker '/tmp/pip-req-tracker-z2weu5qj'