2019-07-14T16:05:47 Created temporary directory: /tmp/pip-ephem-wheel-cache-4zzu3reo
2019-07-14T16:05:47 Created temporary directory: /tmp/pip-req-tracker-60w8yb5j
2019-07-14T16:05:47 Created requirements tracker '/tmp/pip-req-tracker-60w8yb5j'
2019-07-14T16:05:47 Created temporary directory: /tmp/pip-wheel-x5rrcti_
2019-07-14T16:05:48 Collecting mitre==0.9b2
2019-07-14T16:05:48   1 location(s) to search for versions of mitre:
2019-07-14T16:05:48   * https://pypi.org/simple/mitre/
2019-07-14T16:05:48   Getting page https://pypi.org/simple/mitre/
2019-07-14T16:05:48   Analyzing links from page https://pypi.org/simple/mitre/
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/59/f6/233a0adc07eaf97d28545b7f42f8c3bd3a6cd6f98179e644e75257ea869b/mitre-0.9b1-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=6b5a7e496c46a53d5e2b2067f67b1f1d94075b525acea979a32cff11b15542d3 (from https://pypi.org/simple/mitre/); it is not compatible with this Python
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/e0/1b/72d62c2071b3918a614f0f5ad86bcc286aa7ebdf598541bef16a47805c3c/mitre-0.9b1.tar.gz#sha256=771589e92e4267a4e551dfd104be5d2cc2c6e5d56634bd29fefe937f976ccdaf (from https://pypi.org/simple/mitre/), version: 0.9b1
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/47/14/38f5abf9aabdc12a77be89fbd69618cc833a9e9d4c2c81ba7b3d66f2babd/mitre-0.9b2-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=c58e141cf4c9e2f2755eaa54eb80a7fe8cceef243d154cb741688ac8d23c6116 (from https://pypi.org/simple/mitre/); it is not compatible with this Python
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz#sha256=0bbb16e6d42ffb37620fd31ae547cf776d9e92aba926ff1c46eef6cca76f0fe1 (from https://pypi.org/simple/mitre/), version: 0.9b2
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/07/a1/111c00ce0ab5508eb79f5375ca0fee326ce76b5800a53995018d7b80fb47/mitre-0.9b3-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=3813a9da8f362e7918261410bd345fc19d2c0a3627b40fdb4b2d8ef2724e5579 (from https://pypi.org/simple/mitre/); it is not compatible with this Python
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/41/36/690c959ee7ca63b3c7703a4f0bd5cc6295b9628fa0667ca53f0a900a0e37/mitre-0.9b3.tar.gz#sha256=cbc0aaea05c289e3a56abf0c45506f663b7616e0138d28cd0725a1046ab61828 (from https://pypi.org/simple/mitre/), version: 0.9b3
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/6a/24/8151e74639efbec4abc53d046b077bc30a8030f0a4ed05f341896d08310f/mitre-0.9b4-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=b2ec818db040005ea1253503e2c6f9597d4cbc0538c45da6c73ef5d074ee562c (from https://pypi.org/simple/mitre/); it is not compatible with this Python
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/5a/b9/ef6ba6d02cb43873415935aac15ae0af557bc19c68670a4df756a2d19cc4/mitre-0.9b4.tar.gz#sha256=b1885e1c527afaf8f0b9d3bf8b92b84343db20919b61271665acea7f162c9871 (from https://pypi.org/simple/mitre/), version: 0.9b4
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/68/39/26cccdca887c89b2e366625711f0447880aa99e424e35fa0767f5f5e6005/mitre-0.9b5-cp27-cp27m-macosx_10_6_x86_64.whl#sha256=3e6023c4a9973a6d88196756aa0ebc54635513d0def0fdb91dd7a525b61eaf65 (from https://pypi.org/simple/mitre/); it is not compatible with this Python
2019-07-14T16:05:48     Skipping link https://files.pythonhosted.org/packages/c4/15/1344c018f16ea96f6563f2f783d516efb34ddc67d8b50e95ca55da75e7ce/mitre-0.9b5-py2.7-linux-x86_64.egg#sha256=71140d6aeedd1cea5694511d6b866689d44a247801853aa33a33d5be8f45bd0c (from https://pypi.org/simple/mitre/); unsupported archive format: .egg
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/41/10/68a541b0441229176bfddd44dca10efb6f400b54c099f9645a3f8c1e73bc/mitre-0.9b5.tar.gz#sha256=80cc8624b88e26c34e2ff8023ee0eeb569fe731eb4df28354387dd8f46aca155 (from https://pypi.org/simple/mitre/), version: 0.9b5
2019-07-14T16:05:48     Found link https://files.pythonhosted.org/packages/66/c8/d9202a5a72c7d28913017486124273a60a53ab428c956c169784dccc6cb6/mitre-1.0b1.tar.gz#sha256=358fbd057f95068b2f6372af424a71fee16d6a5eb780201de6958bc2ec201dcf (from https://pypi.org/simple/mitre/), version: 1.0b1
2019-07-14T16:05:48   Using version 0.9b2 (newest of versions: 0.9b2)
2019-07-14T16:05:48   Created temporary directory: /tmp/pip-unpack-75y6hlej
2019-07-14T16:05:48   Downloading https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz (9.5MB)
2019-07-14T16:05:48   Downloading from URL https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz#sha256=0bbb16e6d42ffb37620fd31ae547cf776d9e92aba926ff1c46eef6cca76f0fe1 (from https://pypi.org/simple/mitre/)
2019-07-14T16:05:56   Added mitre==0.9b2 from https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz#sha256=0bbb16e6d42ffb37620fd31ae547cf776d9e92aba926ff1c46eef6cca76f0fe1 to build tracker '/tmp/pip-req-tracker-60w8yb5j'
2019-07-14T16:05:56     Running setup.py (path:/tmp/pip-wheel-x5rrcti_/mitre/setup.py) egg_info for package mitre
2019-07-14T16:05:56     Running command python setup.py egg_info
2019-07-14T16:05:58     running egg_info
2019-07-14T16:05:58     creating pip-egg-info/mitre.egg-info
2019-07-14T16:05:58     writing pip-egg-info/mitre.egg-info/PKG-INFO
2019-07-14T16:05:58     writing dependency_links to pip-egg-info/mitre.egg-info/dependency_links.txt
2019-07-14T16:05:58     writing entry points to pip-egg-info/mitre.egg-info/entry_points.txt
2019-07-14T16:05:58     writing requirements to pip-egg-info/mitre.egg-info/requires.txt
2019-07-14T16:05:58     writing top-level names to pip-egg-info/mitre.egg-info/top_level.txt
2019-07-14T16:05:58     writing manifest file 'pip-egg-info/mitre.egg-info/SOURCES.txt'
2019-07-14T16:05:58     reading manifest file 'pip-egg-info/mitre.egg-info/SOURCES.txt'
2019-07-14T16:05:58     reading manifest template 'MANIFEST.in'
2019-07-14T16:05:58     writing manifest file 'pip-egg-info/mitre.egg-info/SOURCES.txt'
2019-07-14T16:05:58     /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '0.9beta2' to '0.9b2'
2019-07-14T16:05:58       normalized_version,
2019-07-14T16:05:58   Source in /tmp/pip-wheel-x5rrcti_/mitre has version 0.9b2, which satisfies requirement mitre==0.9b2 from https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz#sha256=0bbb16e6d42ffb37620fd31ae547cf776d9e92aba926ff1c46eef6cca76f0fe1
2019-07-14T16:05:58   Removed mitre==0.9b2 from https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz#sha256=0bbb16e6d42ffb37620fd31ae547cf776d9e92aba926ff1c46eef6cca76f0fe1 from build tracker '/tmp/pip-req-tracker-60w8yb5j'
2019-07-14T16:05:58 Building wheels for collected packages: mitre
2019-07-14T16:05:58   Created temporary directory: /tmp/pip-wheel-6qbj1_mr
2019-07-14T16:05:58   Building wheel for mitre (setup.py): started
2019-07-14T16:05:58   Destination directory: /tmp/pip-wheel-6qbj1_mr
2019-07-14T16:05:58   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-x5rrcti_/mitre/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6qbj1_mr
2019-07-14T16:06:00   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '0.9beta2' to '0.9b2'
2019-07-14T16:06:00     normalized_version,
2019-07-14T16:06:00   running bdist_wheel
2019-07-14T16:06:00   running build
2019-07-14T16:06:00   running build_py
2019-07-14T16:06:00   creating build
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/main.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/posterior.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/__init__.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/rules.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/test.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/command_line.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/logit_rules.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/visualization.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/logit_rule_test.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/logit_test.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/key_comparison.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/lambda_quick_test.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/mvnpdf_cholesky.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/prior_by_primitive.py -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/__init__.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/sequencing.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/data_processing.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/crossvalidation.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/synthetic_data.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/transforms.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   copying mitre/data_processing/filtering.py -> build/lib.linux-armv7l-3.7/mitre/data_processing
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   copying mitre/load_data/distance_based.py -> build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   copying mitre/load_data/__init__.py -> build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   copying mitre/load_data/pplacer.py -> build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   copying mitre/load_data/basic.py -> build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   copying mitre/load_data/taxonomy_annotation.py -> build/lib.linux-armv7l-3.7/mitre/load_data
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/trees
2019-07-14T16:06:00   copying mitre/trees/__init__.py -> build/lib.linux-armv7l-3.7/mitre/trees
2019-07-14T16:06:00   copying mitre/trees/simulators.py -> build/lib.linux-armv7l-3.7/mitre/trees
2019-07-14T16:06:00   copying mitre/trees/utilities.py -> build/lib.linux-armv7l-3.7/mitre/trees
2019-07-14T16:06:00   copying mitre/trees/priors.py -> build/lib.linux-armv7l-3.7/mitre/trees
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/comparison_methods
2019-07-14T16:06:00   copying mitre/comparison_methods/__init__.py -> build/lib.linux-armv7l-3.7/mitre/comparison_methods
2019-07-14T16:06:00   copying mitre/comparison_methods/sklearn_wrappers.py -> build/lib.linux-armv7l-3.7/mitre/comparison_methods
2019-07-14T16:06:00   running egg_info
2019-07-14T16:06:00   writing mitre.egg-info/PKG-INFO
2019-07-14T16:06:00   writing dependency_links to mitre.egg-info/dependency_links.txt
2019-07-14T16:06:00   writing entry points to mitre.egg-info/entry_points.txt
2019-07-14T16:06:00   writing requirements to mitre.egg-info/requires.txt
2019-07-14T16:06:00   writing top-level names to mitre.egg-info/top_level.txt
2019-07-14T16:06:00   reading manifest file 'mitre.egg-info/SOURCES.txt'
2019-07-14T16:06:00   reading manifest template 'MANIFEST.in'
2019-07-14T16:06:00   writing manifest file 'mitre.egg-info/SOURCES.txt'
2019-07-14T16:06:00   copying mitre/efficient_likelihoods.c -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/efficient_likelihoods.pyx -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/quick_test.cfg -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   copying mitre/template.html -> build/lib.linux-armv7l-3.7/mitre
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/example_data
2019-07-14T16:06:00   copying mitre/example_data/CITATIONS.txt -> build/lib.linux-armv7l-3.7/mitre/example_data
2019-07-14T16:06:00   copying mitre/example_data/example_settings.cfg -> build/lib.linux-armv7l-3.7/mitre/example_data
2019-07-14T16:06:00   creating build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:00   copying mitre/example_data/bokulich/NOTE -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:00   copying mitre/example_data/bokulich/abundance.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/dada2_placements.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/placement.jplace -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/sample_metadata.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/sample_metadata_no_repeats.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/seq_info.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/sequence_key.fa -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/subject_data.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   copying mitre/example_data/bokulich/taxaTable.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/bokulich
2019-07-14T16:06:01   creating build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:01   copying mitre/example_data/david/abundance.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/david_long.cfg.lsf -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/mothur_placements.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/placements.jplace -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/sample_metadata.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/seq_info.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/sequence_key.fa -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/subject_data.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:02   copying mitre/example_data/david/taxaTable.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/david
2019-07-14T16:06:03   creating build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/abundance.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/dada2_placements.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/placement.jplace -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/sample_metadata.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/seq_info.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/sequence_key.fa -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/subject_data.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/taxaTable.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   copying mitre/example_data/digiulio/test.cfg.lsf -> build/lib.linux-armv7l-3.7/mitre/example_data/digiulio
2019-07-14T16:06:03   creating build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:03   copying mitre/example_data/karelia/README -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:03   copying mitre/example_data/karelia/abundance.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/add_any_allergy_variables.py -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/dada2_placements.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/placement.jplace -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/sample_data.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/sample_metadata.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/seq_info.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/sequence_key.fa -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/subject_data.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/subject_data_augmented.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   copying mitre/example_data/karelia/taxaTable.csv -> build/lib.linux-armv7l-3.7/mitre/example_data/karelia
2019-07-14T16:06:04   running build_ext
2019-07-14T16:06:05   building 'efficient_likelihoods' extension
2019-07-14T16:06:05   creating build/temp.linux-armv7l-3.7
2019-07-14T16:06:05   creating build/temp.linux-armv7l-3.7/mitre
2019-07-14T16:06:05   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c mitre/efficient_likelihoods.c -o build/temp.linux-armv7l-3.7/mitre/efficient_likelihoods.o
2019-07-14T16:06:05   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2019-07-14T16:06:05                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-07-14T16:06:05                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-07-14T16:06:05                    from mitre/efficient_likelihoods.c:274:
2019-07-14T16:06:05   /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-07-14T16:06:05    #warning "Using deprecated NumPy API, disable it with " \
2019-07-14T16:06:05     ^~~~~~~
2019-07-14T16:06:06   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
2019-07-14T16:06:06                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-07-14T16:06:06                    from mitre/efficient_likelihoods.c:274:
2019-07-14T16:06:06   /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
2019-07-14T16:06:06    _import_array(void)
2019-07-14T16:06:06    ^~~~~~~~~~~~~
2019-07-14T16:06:18   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/mitre/efficient_likelihoods.o -o build/lib.linux-armv7l-3.7/efficient_likelihoods.cpython-37m-arm-linux-gnueabihf.so
2019-07-14T16:06:18   installing to build/bdist.linux-armv7l/wheel
2019-07-14T16:06:18   running install
2019-07-14T16:06:18   running install_lib
2019-07-14T16:06:18   creating build/bdist.linux-armv7l
2019-07-14T16:06:18   creating build/bdist.linux-armv7l/wheel
2019-07-14T16:06:18   copying build/lib.linux-armv7l-3.7/efficient_likelihoods.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2019-07-14T16:06:18   creating build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:18   copying build/lib.linux-armv7l-3.7/mitre/quick_test.cfg -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:18   creating build/bdist.linux-armv7l/wheel/mitre/comparison_methods
2019-07-14T16:06:18   copying build/lib.linux-armv7l-3.7/mitre/comparison_methods/__init__.py -> build/bdist.linux-armv7l/wheel/mitre/comparison_methods
2019-07-14T16:06:18   copying build/lib.linux-armv7l-3.7/mitre/comparison_methods/sklearn_wrappers.py -> build/bdist.linux-armv7l/wheel/mitre/comparison_methods
2019-07-14T16:06:18   copying build/lib.linux-armv7l-3.7/mitre/main.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/posterior.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/efficient_likelihoods.c -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/__init__.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/rules.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/template.html -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/test.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/command_line.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/logit_rules.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:19   creating build/bdist.linux-armv7l/wheel/mitre/example_data
2019-07-14T16:06:19   creating build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/sample_metadata.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/abundance.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/sequence_key.fa -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/placement.jplace -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/NOTE -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/seq_info.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/taxaTable.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/sample_metadata_no_repeats.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/subject_data.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/bokulich/dada2_placements.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/bokulich
2019-07-14T16:06:19   creating build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/sample_metadata.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:19   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/placements.jplace -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:20   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/abundance.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:20   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/sequence_key.fa -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/david_long.cfg.lsf -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/seq_info.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/taxaTable.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/mothur_placements.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/david/subject_data.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/david
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/example_settings.cfg -> build/bdist.linux-armv7l/wheel/mitre/example_data
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/CITATIONS.txt -> build/bdist.linux-armv7l/wheel/mitre/example_data
2019-07-14T16:06:21   creating build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/sample_metadata.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/abundance.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:21   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/sequence_key.fa -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/README -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/add_any_allergy_variables.py -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/sample_data.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/placement.jplace -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/seq_info.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/taxaTable.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/subject_data_augmented.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/subject_data.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/karelia/dada2_placements.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/karelia
2019-07-14T16:06:22   creating build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/sample_metadata.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/abundance.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/sequence_key.fa -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/test.cfg.lsf -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/placement.jplace -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/seq_info.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/taxaTable.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/subject_data.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/example_data/digiulio/dada2_placements.csv -> build/bdist.linux-armv7l/wheel/mitre/example_data/digiulio
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/efficient_likelihoods.pyx -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/visualization.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   creating build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/__init__.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/sequencing.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/data_processing.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/crossvalidation.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/synthetic_data.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/transforms.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/data_processing/filtering.py -> build/bdist.linux-armv7l/wheel/mitre/data_processing
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/logit_rule_test.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   creating build/bdist.linux-armv7l/wheel/mitre/trees
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/trees/__init__.py -> build/bdist.linux-armv7l/wheel/mitre/trees
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/trees/simulators.py -> build/bdist.linux-armv7l/wheel/mitre/trees
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/trees/utilities.py -> build/bdist.linux-armv7l/wheel/mitre/trees
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/trees/priors.py -> build/bdist.linux-armv7l/wheel/mitre/trees
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/logit_test.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   creating build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/load_data/distance_based.py -> build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/load_data/__init__.py -> build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/load_data/pplacer.py -> build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/load_data/basic.py -> build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/load_data/taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/mitre/load_data
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/key_comparison.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/lambda_quick_test.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/mvnpdf_cholesky.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   copying build/lib.linux-armv7l-3.7/mitre/prior_by_primitive.py -> build/bdist.linux-armv7l/wheel/mitre
2019-07-14T16:06:22   running install_egg_info
2019-07-14T16:06:23   Copying mitre.egg-info to build/bdist.linux-armv7l/wheel/mitre-0.9b2-py3.7.egg-info
2019-07-14T16:06:23   running install_scripts
2019-07-14T16:06:23   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2019-07-14T16:06:23   creating build/bdist.linux-armv7l/wheel/mitre-0.9b2.dist-info/WHEEL
2019-07-14T16:06:23   creating '/tmp/pip-wheel-6qbj1_mr/mitre-0.9b2-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-14T16:06:23   adding 'efficient_likelihoods.cpython-37m-arm-linux-gnueabihf.so'
2019-07-14T16:06:23   adding 'mitre/__init__.py'
2019-07-14T16:06:23   adding 'mitre/command_line.py'
2019-07-14T16:06:23   adding 'mitre/efficient_likelihoods.c'
2019-07-14T16:06:23   adding 'mitre/efficient_likelihoods.pyx'
2019-07-14T16:06:23   adding 'mitre/key_comparison.py'
2019-07-14T16:06:23   adding 'mitre/lambda_quick_test.py'
2019-07-14T16:06:23   adding 'mitre/logit_rule_test.py'
2019-07-14T16:06:23   adding 'mitre/logit_rules.py'
2019-07-14T16:06:23   adding 'mitre/logit_test.py'
2019-07-14T16:06:23   adding 'mitre/main.py'
2019-07-14T16:06:23   adding 'mitre/mvnpdf_cholesky.py'
2019-07-14T16:06:23   adding 'mitre/posterior.py'
2019-07-14T16:06:23   adding 'mitre/prior_by_primitive.py'
2019-07-14T16:06:23   adding 'mitre/quick_test.cfg'
2019-07-14T16:06:23   adding 'mitre/rules.py'
2019-07-14T16:06:23   adding 'mitre/template.html'
2019-07-14T16:06:23   adding 'mitre/test.py'
2019-07-14T16:06:23   adding 'mitre/visualization.py'
2019-07-14T16:06:23   adding 'mitre/comparison_methods/__init__.py'
2019-07-14T16:06:23   adding 'mitre/comparison_methods/sklearn_wrappers.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/__init__.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/crossvalidation.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/data_processing.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/filtering.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/sequencing.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/synthetic_data.py'
2019-07-14T16:06:23   adding 'mitre/data_processing/transforms.py'
2019-07-14T16:06:23   adding 'mitre/example_data/CITATIONS.txt'
2019-07-14T16:06:23   adding 'mitre/example_data/example_settings.cfg'
2019-07-14T16:06:23   adding 'mitre/example_data/bokulich/NOTE'
2019-07-14T16:06:24   adding 'mitre/example_data/bokulich/abundance.csv'
2019-07-14T16:06:24   adding 'mitre/example_data/bokulich/dada2_placements.csv'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/placement.jplace'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/sample_metadata.csv'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/sample_metadata_no_repeats.csv'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/seq_info.csv'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/sequence_key.fa'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/subject_data.csv'
2019-07-14T16:06:25   adding 'mitre/example_data/bokulich/taxaTable.csv'
2019-07-14T16:06:26   adding 'mitre/example_data/david/abundance.csv'
2019-07-14T16:06:26   adding 'mitre/example_data/david/david_long.cfg.lsf'
2019-07-14T16:06:26   adding 'mitre/example_data/david/mothur_placements.csv'
2019-07-14T16:06:29   adding 'mitre/example_data/david/placements.jplace'
2019-07-14T16:06:29   adding 'mitre/example_data/david/sample_metadata.csv'
2019-07-14T16:06:29   adding 'mitre/example_data/david/seq_info.csv'
2019-07-14T16:06:29   adding 'mitre/example_data/david/sequence_key.fa'
2019-07-14T16:06:29   adding 'mitre/example_data/david/subject_data.csv'
2019-07-14T16:06:29   adding 'mitre/example_data/david/taxaTable.csv'
2019-07-14T16:06:30   adding 'mitre/example_data/digiulio/abundance.csv'
2019-07-14T16:06:30   adding 'mitre/example_data/digiulio/dada2_placements.csv'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/placement.jplace'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/sample_metadata.csv'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/seq_info.csv'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/sequence_key.fa'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/subject_data.csv'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/taxaTable.csv'
2019-07-14T16:06:31   adding 'mitre/example_data/digiulio/test.cfg.lsf'
2019-07-14T16:06:31   adding 'mitre/example_data/karelia/README'
2019-07-14T16:06:32   adding 'mitre/example_data/karelia/abundance.csv'
2019-07-14T16:06:32   adding 'mitre/example_data/karelia/add_any_allergy_variables.py'
2019-07-14T16:06:33   adding 'mitre/example_data/karelia/dada2_placements.csv'
2019-07-14T16:06:33   adding 'mitre/example_data/karelia/placement.jplace'
2019-07-14T16:06:33   adding 'mitre/example_data/karelia/sample_data.csv'
2019-07-14T16:06:33   adding 'mitre/example_data/karelia/sample_metadata.csv'
2019-07-14T16:06:33   adding 'mitre/example_data/karelia/seq_info.csv'
2019-07-14T16:06:34   adding 'mitre/example_data/karelia/sequence_key.fa'
2019-07-14T16:06:34   adding 'mitre/example_data/karelia/subject_data.csv'
2019-07-14T16:06:34   adding 'mitre/example_data/karelia/subject_data_augmented.csv'
2019-07-14T16:06:34   adding 'mitre/example_data/karelia/taxaTable.csv'
2019-07-14T16:06:34   adding 'mitre/load_data/__init__.py'
2019-07-14T16:06:34   adding 'mitre/load_data/basic.py'
2019-07-14T16:06:34   adding 'mitre/load_data/distance_based.py'
2019-07-14T16:06:34   adding 'mitre/load_data/pplacer.py'
2019-07-14T16:06:34   adding 'mitre/load_data/taxonomy_annotation.py'
2019-07-14T16:06:34   adding 'mitre/trees/__init__.py'
2019-07-14T16:06:34   adding 'mitre/trees/priors.py'
2019-07-14T16:06:34   adding 'mitre/trees/simulators.py'
2019-07-14T16:06:34   adding 'mitre/trees/utilities.py'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/LICENSE.txt'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/METADATA'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/WHEEL'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/entry_points.txt'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/top_level.txt'
2019-07-14T16:06:34   adding 'mitre-0.9b2.dist-info/RECORD'
2019-07-14T16:06:34   removing build/bdist.linux-armv7l/wheel
2019-07-14T16:06:35   Building wheel for mitre (setup.py): finished with status 'done'
2019-07-14T16:06:35   Stored in directory: /tmp/tmps2o8u0kf
2019-07-14T16:06:35 Successfully built mitre
2019-07-14T16:06:35 Cleaning up...
2019-07-14T16:06:35   Removing source in /tmp/pip-wheel-x5rrcti_/mitre
2019-07-14T16:06:35 Removed build tracker '/tmp/pip-req-tracker-60w8yb5j'