2019-07-14T21:52:58 Created temporary directory: /tmp/pip-ephem-wheel-cache-33mlz_4d 2019-07-14T21:52:58 Created temporary directory: /tmp/pip-req-tracker-yfs68tg5 2019-07-14T21:52:58 Created requirements tracker '/tmp/pip-req-tracker-yfs68tg5' 2019-07-14T21:52:58 Created temporary directory: /tmp/pip-wheel-clw689s7 2019-07-14T21:52:58 Collecting actg==0.0.5 2019-07-14T21:52:58 1 location(s) to search for versions of actg: 2019-07-14T21:52:58 * https://pypi.org/simple/actg/ 2019-07-14T21:52:58 Getting page https://pypi.org/simple/actg/ 2019-07-14T21:52:58 Analyzing links from page https://pypi.org/simple/actg/ 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/ef/15/2e0446c1f5b122e680f16b9b3853eaa17e10c389cb2b26ad89b81bc698a9/actg-0.0.1a0.tar.gz#sha256=5c362ce0d6f5ad52cef51ce768184842342960981a7fb1b613458b9983f3e5d6 (from https://pypi.org/simple/actg/) (requires-python:>=3), version: 0.0.1a0 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/9d/ba/5359e5ce8323bf5d7147aed6db57cf3e9a6fbda5448859d2bdfebe2359be/actg-0.0.2.tar.gz#sha256=3f127c6f3616ef49bf234058935dc77236f6f25a4f2f237522a115d511e0b3ac (from https://pypi.org/simple/actg/) (requires-python:>=3), version: 0.0.2 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/29/97/89031b1ef2848c0e7a2fd165733cb28a6edeae06f8e169dbe1577dfe242f/actg-0.0.3.tar.gz#sha256=ab0340f13d83b4bad01a6da5488af204760d1f41afa51850448acf00ed0fa476 (from https://pypi.org/simple/actg/) (requires-python:>=3), version: 0.0.3 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/ae/89/5c342159447627a9d31a1fa712690561e8ee350f52646bacc14b9ccea748/actg-0.0.4.tar.gz#sha256=5ac9e96c26206f1cd60d62c198d3d057db432ca9c54a6f171fed3f33a08530cd (from https://pypi.org/simple/actg/) (requires-python:>=3.6), version: 0.0.4 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz#sha256=2b90a15b4fcdb1a24a33ce5c0b24884d7483657e3ed6fb3199e9c310210bd2ea (from https://pypi.org/simple/actg/) (requires-python:>=3.6), version: 0.0.5 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/ae/c9/8182d1ab0d25daf9d5021897bd0b2252462c01a350d6f6d68a3e36485c9e/actg-0.0.6.tar.gz#sha256=9c3cc51e253e9515743717115e270cddb175beecd0b5404b6de1ebd2c0cf453b (from https://pypi.org/simple/actg/) (requires-python:>=3.6), version: 0.0.6 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/d2/da/3475f81a51736c42dd51d9539d655ccc21626b429577d85457da737c0997/actg-0.0.7.tar.gz#sha256=0a140b75ffdd5dd91e199751fa6d0387f072a8f1f8e7895c3f8aee488f50f260 (from https://pypi.org/simple/actg/) (requires-python:>=3.6), version: 0.0.7 2019-07-14T21:52:58 Found link https://files.pythonhosted.org/packages/32/78/a87e39b3ff4212b98398979e0b305a7df4d2427362b47c6fdb303efc0809/actg-0.0.9.tar.gz#sha256=23e4255db974533997206b8fa60ad6e3cc5a7e311cf7b46781ec6214c25d0733 (from https://pypi.org/simple/actg/) (requires-python:>=3.6), version: 0.0.9 2019-07-14T21:52:58 Using version 0.0.5 (newest of versions: 0.0.5) 2019-07-14T21:52:58 Created temporary directory: /tmp/pip-unpack-amey3gn_ 2019-07-14T21:52:58 Downloading https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz 2019-07-14T21:52:58 Downloading from URL https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz#sha256=2b90a15b4fcdb1a24a33ce5c0b24884d7483657e3ed6fb3199e9c310210bd2ea (from https://pypi.org/simple/actg/) (requires-python:>=3.6) 2019-07-14T21:52:58 Added actg==0.0.5 from https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz#sha256=2b90a15b4fcdb1a24a33ce5c0b24884d7483657e3ed6fb3199e9c310210bd2ea to build tracker '/tmp/pip-req-tracker-yfs68tg5' 2019-07-14T21:52:58 Running setup.py (path:/tmp/pip-wheel-clw689s7/actg/setup.py) egg_info for package actg 2019-07-14T21:52:58 Running command python setup.py egg_info 2019-07-14T21:52:59 running egg_info 2019-07-14T21:52:59 creating pip-egg-info/actg.egg-info 2019-07-14T21:52:59 writing pip-egg-info/actg.egg-info/PKG-INFO 2019-07-14T21:52:59 writing dependency_links to pip-egg-info/actg.egg-info/dependency_links.txt 2019-07-14T21:52:59 writing entry points to pip-egg-info/actg.egg-info/entry_points.txt 2019-07-14T21:52:59 writing requirements to pip-egg-info/actg.egg-info/requires.txt 2019-07-14T21:52:59 writing top-level names to pip-egg-info/actg.egg-info/top_level.txt 2019-07-14T21:52:59 writing manifest file 'pip-egg-info/actg.egg-info/SOURCES.txt' 2019-07-14T21:53:00 reading manifest file 'pip-egg-info/actg.egg-info/SOURCES.txt' 2019-07-14T21:53:00 writing manifest file 'pip-egg-info/actg.egg-info/SOURCES.txt' 2019-07-14T21:53:00 Source in /tmp/pip-wheel-clw689s7/actg has version 0.0.5, which satisfies requirement actg==0.0.5 from https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz#sha256=2b90a15b4fcdb1a24a33ce5c0b24884d7483657e3ed6fb3199e9c310210bd2ea 2019-07-14T21:53:00 Removed actg==0.0.5 from https://files.pythonhosted.org/packages/cd/33/0df59446f261307697259b239ff9710e440e5122a5b1c1c59571518beb81/actg-0.0.5.tar.gz#sha256=2b90a15b4fcdb1a24a33ce5c0b24884d7483657e3ed6fb3199e9c310210bd2ea from build tracker '/tmp/pip-req-tracker-yfs68tg5' 2019-07-14T21:53:00 Building wheels for collected packages: actg 2019-07-14T21:53:00 Created temporary directory: /tmp/pip-wheel-36n8x6jg 2019-07-14T21:53:00 Building wheel for actg (setup.py): started 2019-07-14T21:53:00 Destination directory: /tmp/pip-wheel-36n8x6jg 2019-07-14T21:53:00 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-clw689s7/actg/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-36n8x6jg 2019-07-14T21:53:01 running bdist_wheel 2019-07-14T21:53:02 running build 2019-07-14T21:53:02 running build_py 2019-07-14T21:53:02 creating build 2019-07-14T21:53:02 creating build/lib 2019-07-14T21:53:02 creating build/lib/actg 2019-07-14T21:53:02 copying actg/main_process.py -> build/lib/actg 2019-07-14T21:53:02 copying actg/processes.py -> build/lib/actg 2019-07-14T21:53:02 copying actg/__main__.py -> build/lib/actg 2019-07-14T21:53:02 copying actg/messages.py -> build/lib/actg 2019-07-14T21:53:02 copying actg/__init__.py -> build/lib/actg 2019-07-14T21:53:02 creating build/lib/actg/pipeline 2019-07-14T21:53:02 copying actg/pipeline/__init__.py -> build/lib/actg/pipeline 2019-07-14T21:53:02 creating build/lib/actg/tools 2019-07-14T21:53:02 copying actg/tools/utils.py -> build/lib/actg/tools 2019-07-14T21:53:02 copying actg/tools/biodata.py -> build/lib/actg/tools 2019-07-14T21:53:02 copying actg/tools/database.py -> build/lib/actg/tools 2019-07-14T21:53:02 copying actg/tools/__init__.py -> build/lib/actg/tools 2019-07-14T21:53:02 copying actg/tools/system_func.py -> build/lib/actg/tools 2019-07-14T21:53:02 creating build/lib/actg/dbs 2019-07-14T21:53:02 copying actg/dbs/ensembl_db.py -> build/lib/actg/dbs 2019-07-14T21:53:02 copying actg/dbs/__init__.py -> build/lib/actg/dbs 2019-07-14T21:53:02 copying actg/dbs/ucsc_db.py -> build/lib/actg/dbs 2019-07-14T21:53:02 creating build/lib/actg/biofiles 2019-07-14T21:53:02 copying actg/biofiles/bed.py -> build/lib/actg/biofiles 2019-07-14T21:53:02 copying actg/biofiles/vcf.py -> build/lib/actg/biofiles 2019-07-14T21:53:02 copying actg/biofiles/__init__.py -> build/lib/actg/biofiles 2019-07-14T21:53:02 creating build/lib/actg/utils 2019-07-14T21:53:02 copying actg/utils/utils.py -> build/lib/actg/utils 2019-07-14T21:53:02 copying actg/utils/__init__.py -> build/lib/actg/utils 2019-07-14T21:53:02 creating build/lib/actg/tools/utils 2019-07-14T21:53:02 copying actg/tools/utils/configuration.py -> build/lib/actg/tools/utils 2019-07-14T21:53:02 copying actg/tools/utils/__init__.py -> build/lib/actg/tools/utils 2019-07-14T21:53:02 creating build/lib/actg/dbs/tests 2019-07-14T21:53:02 copying actg/dbs/tests/__init__.py -> build/lib/actg/dbs/tests 2019-07-14T21:53:02 copying actg/dbs/tests/test_001.py -> build/lib/actg/dbs/tests 2019-07-14T21:53:02 installing to build/bdist.linux-armv7l/wheel 2019-07-14T21:53:02 running install 2019-07-14T21:53:02 running install_lib 2019-07-14T21:53:02 creating build/bdist.linux-armv7l 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/pipeline 2019-07-14T21:53:02 copying build/lib/actg/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/actg/pipeline 2019-07-14T21:53:02 copying build/lib/actg/main_process.py -> build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 copying build/lib/actg/processes.py -> build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 copying build/lib/actg/tools/utils.py -> build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 copying build/lib/actg/tools/biodata.py -> build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/tools/utils 2019-07-14T21:53:02 copying build/lib/actg/tools/utils/configuration.py -> build/bdist.linux-armv7l/wheel/actg/tools/utils 2019-07-14T21:53:02 copying build/lib/actg/tools/utils/__init__.py -> build/bdist.linux-armv7l/wheel/actg/tools/utils 2019-07-14T21:53:02 copying build/lib/actg/tools/database.py -> build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 copying build/lib/actg/tools/__init__.py -> build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 copying build/lib/actg/tools/system_func.py -> build/bdist.linux-armv7l/wheel/actg/tools 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/dbs 2019-07-14T21:53:02 copying build/lib/actg/dbs/ensembl_db.py -> build/bdist.linux-armv7l/wheel/actg/dbs 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/dbs/tests 2019-07-14T21:53:02 copying build/lib/actg/dbs/tests/__init__.py -> build/bdist.linux-armv7l/wheel/actg/dbs/tests 2019-07-14T21:53:02 copying build/lib/actg/dbs/tests/test_001.py -> build/bdist.linux-armv7l/wheel/actg/dbs/tests 2019-07-14T21:53:02 copying build/lib/actg/dbs/__init__.py -> build/bdist.linux-armv7l/wheel/actg/dbs 2019-07-14T21:53:02 copying build/lib/actg/dbs/ucsc_db.py -> build/bdist.linux-armv7l/wheel/actg/dbs 2019-07-14T21:53:02 copying build/lib/actg/__main__.py -> build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/biofiles 2019-07-14T21:53:02 copying build/lib/actg/biofiles/bed.py -> build/bdist.linux-armv7l/wheel/actg/biofiles 2019-07-14T21:53:02 copying build/lib/actg/biofiles/vcf.py -> build/bdist.linux-armv7l/wheel/actg/biofiles 2019-07-14T21:53:02 copying build/lib/actg/biofiles/__init__.py -> build/bdist.linux-armv7l/wheel/actg/biofiles 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg/utils 2019-07-14T21:53:02 copying build/lib/actg/utils/utils.py -> build/bdist.linux-armv7l/wheel/actg/utils 2019-07-14T21:53:02 copying build/lib/actg/utils/__init__.py -> build/bdist.linux-armv7l/wheel/actg/utils 2019-07-14T21:53:02 copying build/lib/actg/messages.py -> build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 copying build/lib/actg/__init__.py -> build/bdist.linux-armv7l/wheel/actg 2019-07-14T21:53:02 running install_egg_info 2019-07-14T21:53:02 running egg_info 2019-07-14T21:53:02 writing actg.egg-info/PKG-INFO 2019-07-14T21:53:02 writing dependency_links to actg.egg-info/dependency_links.txt 2019-07-14T21:53:02 writing entry points to actg.egg-info/entry_points.txt 2019-07-14T21:53:02 writing requirements to actg.egg-info/requires.txt 2019-07-14T21:53:02 writing top-level names to actg.egg-info/top_level.txt 2019-07-14T21:53:02 reading manifest file 'actg.egg-info/SOURCES.txt' 2019-07-14T21:53:02 writing manifest file 'actg.egg-info/SOURCES.txt' 2019-07-14T21:53:02 Copying actg.egg-info to build/bdist.linux-armv7l/wheel/actg-0.0.5-py3.7.egg-info 2019-07-14T21:53:02 running install_scripts 2019-07-14T21:53:02 creating build/bdist.linux-armv7l/wheel/actg-0.0.5.dist-info/WHEEL 2019-07-14T21:53:02 creating '/tmp/pip-wheel-36n8x6jg/actg-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-14T21:53:02 adding 'actg/__init__.py' 2019-07-14T21:53:02 adding 'actg/__main__.py' 2019-07-14T21:53:02 adding 'actg/main_process.py' 2019-07-14T21:53:02 adding 'actg/messages.py' 2019-07-14T21:53:02 adding 'actg/processes.py' 2019-07-14T21:53:02 adding 'actg/biofiles/__init__.py' 2019-07-14T21:53:02 adding 'actg/biofiles/bed.py' 2019-07-14T21:53:02 adding 'actg/biofiles/vcf.py' 2019-07-14T21:53:02 adding 'actg/dbs/__init__.py' 2019-07-14T21:53:02 adding 'actg/dbs/ensembl_db.py' 2019-07-14T21:53:02 adding 'actg/dbs/ucsc_db.py' 2019-07-14T21:53:02 adding 'actg/dbs/tests/__init__.py' 2019-07-14T21:53:02 adding 'actg/dbs/tests/test_001.py' 2019-07-14T21:53:02 adding 'actg/pipeline/__init__.py' 2019-07-14T21:53:02 adding 'actg/tools/__init__.py' 2019-07-14T21:53:02 adding 'actg/tools/biodata.py' 2019-07-14T21:53:02 adding 'actg/tools/database.py' 2019-07-14T21:53:02 adding 'actg/tools/system_func.py' 2019-07-14T21:53:02 adding 'actg/tools/utils.py' 2019-07-14T21:53:02 adding 'actg/tools/utils/__init__.py' 2019-07-14T21:53:02 adding 'actg/tools/utils/configuration.py' 2019-07-14T21:53:02 adding 'actg/utils/__init__.py' 2019-07-14T21:53:02 adding 'actg/utils/utils.py' 2019-07-14T21:53:02 adding 'actg-0.0.5.dist-info/METADATA' 2019-07-14T21:53:02 adding 'actg-0.0.5.dist-info/WHEEL' 2019-07-14T21:53:02 adding 'actg-0.0.5.dist-info/entry_points.txt' 2019-07-14T21:53:02 adding 'actg-0.0.5.dist-info/top_level.txt' 2019-07-14T21:53:02 adding 'actg-0.0.5.dist-info/RECORD' 2019-07-14T21:53:02 removing build/bdist.linux-armv7l/wheel 2019-07-14T21:53:03 Building wheel for actg (setup.py): finished with status 'done' 2019-07-14T21:53:03 Stored in directory: /tmp/tmprmbj7uzc 2019-07-14T21:53:03 Successfully built actg 2019-07-14T21:53:03 Cleaning up... 2019-07-14T21:53:03 Removing source in /tmp/pip-wheel-clw689s7/actg 2019-07-14T21:53:03 Removed build tracker '/tmp/pip-req-tracker-yfs68tg5'