2019-07-15T17:39:27 Created temporary directory: /tmp/pip-ephem-wheel-cache-g_7849qr
2019-07-15T17:39:27 Created temporary directory: /tmp/pip-req-tracker-zck6frm3
2019-07-15T17:39:27 Created requirements tracker '/tmp/pip-req-tracker-zck6frm3'
2019-07-15T17:39:27 Created temporary directory: /tmp/pip-wheel-o7sjcxus
2019-07-15T17:39:27 Collecting mpathic==0.6
2019-07-15T17:39:27   1 location(s) to search for versions of mpathic:
2019-07-15T17:39:27   * https://pypi.org/simple/mpathic/
2019-07-15T17:39:27   Getting page https://pypi.org/simple/mpathic/
2019-07-15T17:39:27   Analyzing links from page https://pypi.org/simple/mpathic/
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/97/6b/fe19c91b9a5b857e52195039fdb59b39e95f4eaf40f6b82d8437caa97d43/mpathic-0.1-cp27-cp27m-macosx_10_12_intel.whl#sha256=6897071b2f6d5c725bd0deedfdd49062e72bf38ef09393ab7867cd0ba33b9819 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/5d/75/0e86347f796cf5c2650c5778d4850765f0ddebbcf5f433dcbd64df42fee3/mpathic-0.1.tar.gz#sha256=cfeada8127b7ce87bd69ee1fc618b619c21488520e68b45ab6e2cd6a85be942d (from https://pypi.org/simple/mpathic/), version: 0.1
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/a3/65/22bbba43045650abdf2ac21cd5ff2bb52154edbe432defdd86868c747f8b/mpathic-0.2-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=5e6d286038e819294e172c03df4d9c7e41f2fe9888561826333e1cd6b1ba5809 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/c0/8c/8cd08982220f64859dab420ef0ed2443b3b34192cbe2de82e28154d02de3/mpathic-0.2.tar.gz#sha256=c70aeed1888b9f834f9c1e20b8ae11cb9bdbf7b526ae84c6c8fa70cd14af71c2 (from https://pypi.org/simple/mpathic/), version: 0.2
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/f8/62/baad88c243fe152bd075be1d456201068e6a324c50cc2c66a8db26a5e1a4/mpathic-0.3-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=89c83777bb36663ec8ece636a3bdc8ee6c1eaad8d9d3cc92b204df15bca32e98 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/71/d0/3fa76176c988a1ca00d0b7fe8798d086e3a5e2c38d2b1654e593830f8c2b/mpathic-0.3.tar.gz#sha256=8fb6b68a19b48cfc167176663749f69bae0e2ebfe1f2acabaa9c6363a322f744 (from https://pypi.org/simple/mpathic/), version: 0.3
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/33/19/266a7eb6309043be6ebdbd025da124857d4c9d771689a1a429e5a2e79bfb/mpathic-0.4-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=d821f7b167e901a06d829237de6a7057d78341f381309408a3e5c92d517d3ec5 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/83/89/7ca4fdc6b3249019b6abd5cbdd1efc6a1f295402bfdd755c0170de9a8e41/mpathic-0.4.tar.gz#sha256=8f290cd9d1b615902434bede11230ee420203e152ef1c88bfc75a0308e89b838 (from https://pypi.org/simple/mpathic/), version: 0.4
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/b1/d2/6a1d6e7415282836f98a89b109de36adf886132672bbdd96b94592314935/mpathic-0.5-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=46b768dca22a50f88222d7ee2ce4c6378f9eb1763419a7db50fab03b63ce1882 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/9a/19/fefaee72575ebc2062809880457d47cfac468ba38ad3983f3ab4d21742f5/mpathic-0.5.tar.gz#sha256=bee4380814039054618ffab09025ddead54bd691a6c939ef5ed2d590b61ce821 (from https://pypi.org/simple/mpathic/), version: 0.5
2019-07-15T17:39:27     Skipping link https://files.pythonhosted.org/packages/51/0c/c57937244f8350a327c9b9770ea63d7f127f99fb73e84978a844880016bf/mpathic-0.6-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=7cb12d55266afa52bbce9de06391621d06624d5084d44df6da7d3868c9ae6371 (from https://pypi.org/simple/mpathic/); it is not compatible with this Python
2019-07-15T17:39:27     Found link https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz#sha256=1f31c205476808516deacf73906d8071afd35b46a772c20858838e79baaeaa2e (from https://pypi.org/simple/mpathic/), version: 0.6
2019-07-15T17:39:27   Using version 0.6 (newest of versions: 0.6)
2019-07-15T17:39:27   Created temporary directory: /tmp/pip-unpack-qgewffrl
2019-07-15T17:39:27   Downloading https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz (9.0MB)
2019-07-15T17:39:27   Downloading from URL https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz#sha256=1f31c205476808516deacf73906d8071afd35b46a772c20858838e79baaeaa2e (from https://pypi.org/simple/mpathic/)
2019-07-15T17:39:31   Added mpathic==0.6 from https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz#sha256=1f31c205476808516deacf73906d8071afd35b46a772c20858838e79baaeaa2e to build tracker '/tmp/pip-req-tracker-zck6frm3'
2019-07-15T17:39:31     Running setup.py (path:/tmp/pip-wheel-o7sjcxus/mpathic/setup.py) egg_info for package mpathic
2019-07-15T17:39:31     Running command python setup.py egg_info
2019-07-15T17:39:33     running egg_info
2019-07-15T17:39:34     creating pip-egg-info/mpathic.egg-info
2019-07-15T17:39:34     writing pip-egg-info/mpathic.egg-info/PKG-INFO
2019-07-15T17:39:34     writing dependency_links to pip-egg-info/mpathic.egg-info/dependency_links.txt
2019-07-15T17:39:34     writing requirements to pip-egg-info/mpathic.egg-info/requires.txt
2019-07-15T17:39:34     writing top-level names to pip-egg-info/mpathic.egg-info/top_level.txt
2019-07-15T17:39:34     writing manifest file 'pip-egg-info/mpathic.egg-info/SOURCES.txt'
2019-07-15T17:39:34     reading manifest file 'pip-egg-info/mpathic.egg-info/SOURCES.txt'
2019-07-15T17:39:34     reading manifest template 'MANIFEST.in'
2019-07-15T17:39:34     writing manifest file 'pip-egg-info/mpathic.egg-info/SOURCES.txt'
2019-07-15T17:39:35   Source in /tmp/pip-wheel-o7sjcxus/mpathic has version 0.6, which satisfies requirement mpathic==0.6 from https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz#sha256=1f31c205476808516deacf73906d8071afd35b46a772c20858838e79baaeaa2e
2019-07-15T17:39:35   Removed mpathic==0.6 from https://files.pythonhosted.org/packages/75/21/892d5f87ac7766bb4d7c1eb4736551eb96f1e2cd93fcbfef878321812a8e/mpathic-0.6.tar.gz#sha256=1f31c205476808516deacf73906d8071afd35b46a772c20858838e79baaeaa2e from build tracker '/tmp/pip-req-tracker-zck6frm3'
2019-07-15T17:39:35 Building wheels for collected packages: mpathic
2019-07-15T17:39:35   Created temporary directory: /tmp/pip-wheel-fe02b_61
2019-07-15T17:39:35   Building wheel for mpathic (setup.py): started
2019-07-15T17:39:35   Destination directory: /tmp/pip-wheel-fe02b_61
2019-07-15T17:39:35   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-o7sjcxus/mpathic/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fe02b_61
2019-07-15T17:39:37   running bdist_wheel
2019-07-15T17:39:37   running build
2019-07-15T17:39:37   running build_py
2019-07-15T17:39:37   creating build
2019-07-15T17:39:37   creating build/lib.linux-armv7l-3.7
2019-07-15T17:39:37   creating build/lib.linux-armv7l-3.7/mpathic
2019-07-15T17:39:37   copying mpathic/__init__.py -> build/lib.linux-armv7l-3.7/mpathic
2019-07-15T17:39:37   running egg_info
2019-07-15T17:39:37   writing mpathic.egg-info/PKG-INFO
2019-07-15T17:39:37   writing dependency_links to mpathic.egg-info/dependency_links.txt
2019-07-15T17:39:37   writing requirements to mpathic.egg-info/requires.txt
2019-07-15T17:39:37   writing top-level names to mpathic.egg-info/top_level.txt
2019-07-15T17:39:37   reading manifest file 'mpathic.egg-info/SOURCES.txt'
2019-07-15T17:39:38   reading manifest template 'MANIFEST.in'
2019-07-15T17:39:38   writing manifest file 'mpathic.egg-info/SOURCES.txt'
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/data
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/data/sortseq
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/.DS_Store -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/bin_1.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/bin_2.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/bin_3.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/bin_4.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/crp_model.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/data.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/data_small.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/data_tiny.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/files.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/genome_ecoli_1000lines.fa -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/library.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   copying mpathic/data/sortseq/full-0/rnap_model.txt -> build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs
2019-07-15T17:39:38   copying mpathic/docs/.DS_Store -> build/lib.linux-armv7l-3.7/mpathic/docs
2019-07-15T17:39:38   copying mpathic/docs/Makefile -> build/lib.linux-armv7l-3.7/mpathic/docs
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/Documentation.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/environment.pickle -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/evaluate_model.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/examples.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/index.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/learn_model.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/profile_freq.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/profile_info.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/profile_mutrate.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/scan_model.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/simulate_library.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/simulate_sort.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   copying mpathic/docs/build/doctrees/tutorial.doctree -> build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/.buildinfo -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/Documentation.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/evaluate_model.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/examples.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/genindex.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/index.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/learn_model.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/objects.inv -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/profile_freq.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/profile_info.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/profile_mutrate.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/scan_model.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/search.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/searchindex.js -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/simulate_library.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/simulate_sort.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   copying mpathic/docs/build/html/tutorial.html -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_downloads
2019-07-15T17:39:38   copying mpathic/docs/build/html/_downloads/Kinney2010.pdf -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_downloads
2019-07-15T17:39:38   copying mpathic/docs/build/html/_downloads/MPAthic2016.pdf -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_downloads
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_images
2019-07-15T17:39:38   copying mpathic/docs/build/html/_images/S2.png -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_images
2019-07-15T17:39:38   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:38   copying mpathic/docs/build/html/_sources/Documentation.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:38   copying mpathic/docs/build/html/_sources/evaluate_model.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:38   copying mpathic/docs/build/html/_sources/examples.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:38   copying mpathic/docs/build/html/_sources/index.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:38   copying mpathic/docs/build/html/_sources/learn_model.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/profile_freq.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/profile_info.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/profile_mutrate.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/scan_model.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/simulate_library.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/simulate_sort.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   copying mpathic/docs/build/html/_sources/tutorial.rst.txt -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources
2019-07-15T17:39:39   creating build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static
2019-07-15T17:39:39   copying mpathic/docs/build/html/_static/S1.png -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static
2019-07-15T17:39:39   copying mpathic/docs/build/html/_static/S2.png -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static
2019-07-15T17:39:39   copying mpathic/docs/build/html/_static/ajax-loader.gif -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static
2019-07-15T17:39:39   copying mpathic/docs/build/html/_static/background_b01.png -> build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static
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2019-07-15T17:39:40   copying mpathic/src/build/temp.macosx-10.7-x86_64-3.6/fast.o -> build/lib.linux-armv7l-3.7/mpathic/src/build/temp.macosx-10.7-x86_64-3.6
2019-07-15T17:39:40   creating build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/JUNK_gauge_fix.py -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/commands.txt -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/fast.c -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/fast.cpython-36m-darwin.so -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/fast.pyx -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/fast.so -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/gauge_fix.py -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/gauge_fix.py~ -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   copying mpathic/src/junk/work_for_justin_ars.txt -> build/lib.linux-armv7l-3.7/mpathic/src/junk
2019-07-15T17:39:40   creating build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/.DS_Store -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/__init__.py -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/__init__.pyc -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/functional_tests_mpathic.py -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/functional_tests_mpathic.pyc -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   copying mpathic/tests/test_error -> build/lib.linux-armv7l-3.7/mpathic/tests
2019-07-15T17:39:40   running build_ext
2019-07-15T17:39:40   building 'mpathic.src.fast' extension
2019-07-15T17:39:40   creating build/temp.linux-armv7l-3.7
2019-07-15T17:39:40   creating build/temp.linux-armv7l-3.7/mpathic
2019-07-15T17:39:40   creating build/temp.linux-armv7l-3.7/mpathic/src
2019-07-15T17:39:40   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c mpathic/src/fast.c -o build/temp.linux-armv7l-3.7/mpathic/src/fast.o
2019-07-15T17:39:41   In file included from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2019-07-15T17:39:41                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2019-07-15T17:39:41                    from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2019-07-15T17:39:41                    from mpathic/src/fast.c:566:
2019-07-15T17:39:41   /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2019-07-15T17:39:41    #warning "Using deprecated NumPy API, disable it with " \
2019-07-15T17:39:41     ^~~~~~~
2019-07-15T17:39:56   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/mpathic/src/fast.o -o build/lib.linux-armv7l-3.7/mpathic/src/fast.cpython-37m-arm-linux-gnueabihf.so
2019-07-15T17:39:57   installing to build/bdist.linux-armv7l/wheel
2019-07-15T17:39:57   running install
2019-07-15T17:39:57   running install_lib
2019-07-15T17:39:57   creating build/bdist.linux-armv7l
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/fast.pyx -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_ct.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_mut.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/OLD_profile_info.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/sortseq_for_doc.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/validate.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/evaluate_model.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/Models.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/io_local.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/simulate_sort.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/fast.cpython-36m-darwin.so -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/numerics.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/fast.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/fast.so -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/simulate_sort.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/fast.c -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__init__.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/info.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_info.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/simulate_expression.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/io_local.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/Models.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/predictive_info.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/qc.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/profile_ct.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/evaluate_model.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/simulate_library.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/profile_mut.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/info.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/EstimateMutualInfoforMImax.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/stepper.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/simulate_sort.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/utils.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/_nsb.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/numerics.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/profile_freq.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/gauge.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/learn_model.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/scan_model.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__pycache__/profile_info.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src/__pycache__
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/learn_model.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_ct.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/io_local_class.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/simulate_library.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/info.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/.DS_Store -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/scan_model.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/numerics.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/__init__.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/test_error -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/qc.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/io_local.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/predictive_info.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/_nsb.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_mut.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/EstimateMutualInfoforMImax.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/draw.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/qc.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/utils.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/scan_model.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/EstimateMutualInfoforMImax.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/stepper.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/_nsb.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/gauge.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_activity.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_freq.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/run_tests.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/io_local_class.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/predictiveinfo_old.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/Models.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_info.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/simulate_library.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/setup.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/gauge.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/utils.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/stepper.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/preprocess.py -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/evaluate_model.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src/build
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src/build/temp.macosx-10.12-intel-2.7
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/build/temp.macosx-10.12-intel-2.7/helloworld.o -> build/bdist.linux-armv7l/wheel/mpathic/src/build/temp.macosx-10.12-intel-2.7
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/build/temp.macosx-10.12-intel-2.7/fast.o -> build/bdist.linux-armv7l/wheel/mpathic/src/build/temp.macosx-10.12-intel-2.7
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src/build/temp.macosx-10.7-x86_64-3.6
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/build/temp.macosx-10.7-x86_64-3.6/fast.o -> build/bdist.linux-armv7l/wheel/mpathic/src/build/temp.macosx-10.7-x86_64-3.6
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/fast.pyx -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/fast.cpython-36m-darwin.so -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/work_for_justin_ars.txt -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/fast.so -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/fast.c -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/commands.txt -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/gauge_fix.py~ -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/JUNK_gauge_fix.py -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/junk/gauge_fix.py -> build/bdist.linux-armv7l/wheel/mpathic/src/junk
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2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/predictive_info.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/src/profile_freq.pyc -> build/bdist.linux-armv7l/wheel/mpathic/src
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/tests
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2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/tests/__init__.py -> build/bdist.linux-armv7l/wheel/mpathic/tests
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/tests/.DS_Store -> build/bdist.linux-armv7l/wheel/mpathic/tests
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/tests/__init__.pyc -> build/bdist.linux-armv7l/wheel/mpathic/tests
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/tests/test_error -> build/bdist.linux-armv7l/wheel/mpathic/tests
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/tests/functional_tests_mpathic.py -> build/bdist.linux-armv7l/wheel/mpathic/tests
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/__init__.py -> build/bdist.linux-armv7l/wheel/mpathic
2019-07-15T17:39:57   creating build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/clean_dir.sh -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/data_set_simulated.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/data_set_simulated1.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/ss_model.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/true_model.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/si_pipeline.sh -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/genome_ecoli_100lines.fa -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/ss_input.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/genome_ecoli_1000lines.fa -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:57   copying build/lib.linux-armv7l-3.7/mpathic/examples/genome_ecoli.fa -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/examples/matrix_model.txt -> build/bdist.linux-armv7l/wheel/mpathic/examples
2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/data
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/crp_model.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/data_small.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/bin_2.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/rnap_model.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/data.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/.DS_Store -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/library.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/bin_1.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/bin_3.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/genome_ecoli_1000lines.fa -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/bin_4.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/data/sortseq/full-0/data_tiny.txt -> build/bdist.linux-armv7l/wheel/mpathic/data/sortseq/full-0
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/Makefile -> build/bdist.linux-armv7l/wheel/mpathic/docs
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/.DS_Store -> build/bdist.linux-armv7l/wheel/mpathic/docs
2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/scan_model.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/tutorial.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/simulate_library.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/MPAthic2016.pdf -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/learn_model.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/profile_freq.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/simulate_sort.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/evaluate_model.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/.DS_Store -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/modeling.py -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/Documentation.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/docs/source/_static
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/profile_mutrate.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/profiles.py -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/source/profile_info.rst -> build/bdist.linux-armv7l/wheel/mpathic/docs/source
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_images/S2.png -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_images
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/simulate_library.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
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2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/evaluate_model.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/profile_mutrate.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/examples.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_downloads
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_downloads/MPAthic2016.pdf -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_downloads
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_downloads/Kinney2010.pdf -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_downloads
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/tutorial.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/.buildinfo -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
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2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/profile_mutrate.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/index.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/learn_model.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/simulate_sort.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/tutorial.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/Documentation.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/profile_info.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/scan_model.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/examples.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/evaluate_model.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/profile_freq.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_sources/simulate_library.rst.txt -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_sources
2019-07-15T17:39:58   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/search.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:58   creating build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
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2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/websupport.js -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/bizstyle.css -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/underscore-1.3.1.js -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/down-pressed.png -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/comment-close.png -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/css3-mediaqueries.js -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/up.png -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/jquery-3.2.1.js -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/_static/ajax-loader.gif -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html/_static
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/learn_model.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/profile_info.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/scan_model.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/searchindex.js -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/profile_freq.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/objects.inv -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/Documentation.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/html/simulate_sort.html -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/html
2019-07-15T17:39:59   creating build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/profile_mutrate.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/profile_info.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/examples.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/simulate_library.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/learn_model.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/evaluate_model.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/index.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/tutorial.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/simulate_sort.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/scan_model.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/Documentation.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/profile_freq.doctree -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   copying build/lib.linux-armv7l-3.7/mpathic/docs/build/doctrees/environment.pickle -> build/bdist.linux-armv7l/wheel/mpathic/docs/build/doctrees
2019-07-15T17:39:59   running install_egg_info
2019-07-15T17:39:59   Copying mpathic.egg-info to build/bdist.linux-armv7l/wheel/mpathic-0.6-py3.7.egg-info
2019-07-15T17:39:59   running install_scripts
2019-07-15T17:39:59   creating build/bdist.linux-armv7l/wheel/mpathic-0.6.dist-info/WHEEL
2019-07-15T17:39:59   creating '/tmp/pip-wheel-fe02b_61/mpathic-0.6-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-15T17:39:59   adding 'mpathic/__init__.py'
2019-07-15T17:39:59   adding 'mpathic/data/sortseq/full-0/.DS_Store'
2019-07-15T17:39:59   adding 'mpathic/data/sortseq/full-0/bin_1.txt'
2019-07-15T17:39:59   adding 'mpathic/data/sortseq/full-0/bin_2.txt'
2019-07-15T17:39:59   adding 'mpathic/data/sortseq/full-0/bin_3.txt'
2019-07-15T17:40:00   adding 'mpathic/data/sortseq/full-0/bin_4.txt'
2019-07-15T17:40:00   adding 'mpathic/data/sortseq/full-0/crp_model.txt'
2019-07-15T17:40:00   adding 'mpathic/data/sortseq/full-0/data.txt'
2019-07-15T17:40:00   adding 'mpathic/data/sortseq/full-0/data_small.txt'
2019-07-15T17:40:01   adding 'mpathic/data/sortseq/full-0/data_tiny.txt'
2019-07-15T17:40:01   adding 'mpathic/data/sortseq/full-0/files.txt'
2019-07-15T17:40:01   adding 'mpathic/data/sortseq/full-0/genome_ecoli_1000lines.fa'
2019-07-15T17:40:01   adding 'mpathic/data/sortseq/full-0/library.txt'
2019-07-15T17:40:01   adding 'mpathic/data/sortseq/full-0/rnap_model.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/.DS_Store'
2019-07-15T17:40:01   adding 'mpathic/docs/Makefile'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/Documentation.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/environment.pickle'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/evaluate_model.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/examples.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/index.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/learn_model.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/profile_freq.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/profile_info.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/profile_mutrate.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/scan_model.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/simulate_library.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/simulate_sort.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/doctrees/tutorial.doctree'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/.buildinfo'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/Documentation.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/evaluate_model.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/examples.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/genindex.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/index.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/learn_model.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/objects.inv'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/profile_freq.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/profile_info.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/profile_mutrate.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/scan_model.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/search.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/searchindex.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/simulate_library.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/simulate_sort.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/tutorial.html'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_downloads/Kinney2010.pdf'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_downloads/MPAthic2016.pdf'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_images/S2.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/Documentation.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/evaluate_model.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/examples.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/index.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/learn_model.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/profile_freq.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/profile_info.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/profile_mutrate.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/scan_model.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/simulate_library.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/simulate_sort.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_sources/tutorial.rst.txt'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/S1.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/S2.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/ajax-loader.gif'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/background_b01.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/basic.css'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/bizstyle.css'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/bizstyle.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/comment-bright.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/comment-close.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/comment.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/css3-mediaqueries.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/css3-mediaqueries_src.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/doctools.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/documentation_options.js'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/down-pressed.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/down.png'
2019-07-15T17:40:01   adding 'mpathic/docs/build/html/_static/file.png'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/jquery-3.2.1.js'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/jquery.js'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/minus.png'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/overrides.css'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/plus.png'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/pygments.css'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/searchtools.js'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/underscore-1.3.1.js'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/underscore.js'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/up-pressed.png'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/up.png'
2019-07-15T17:40:02   adding 'mpathic/docs/build/html/_static/websupport.js'
2019-07-15T17:40:02   adding 'mpathic/docs/source/.DS_Store'
2019-07-15T17:40:02   adding 'mpathic/docs/source/Documentation.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/Kinney2010.pdf'
2019-07-15T17:40:02   adding 'mpathic/docs/source/MPAthic2016.pdf'
2019-07-15T17:40:02   adding 'mpathic/docs/source/conf.py'
2019-07-15T17:40:02   adding 'mpathic/docs/source/evaluate_model.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/examples.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/index.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/learn_model.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/modeling.py'
2019-07-15T17:40:02   adding 'mpathic/docs/source/profile_freq.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/profile_info.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/profile_mutrate.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/profiles.py'
2019-07-15T17:40:02   adding 'mpathic/docs/source/scan_model.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/simulate_library.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/simulate_sort.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/simulations.py'
2019-07-15T17:40:02   adding 'mpathic/docs/source/tutorial.rst'
2019-07-15T17:40:02   adding 'mpathic/docs/source/_static/S1.png'
2019-07-15T17:40:02   adding 'mpathic/docs/source/_static/S2.png'
2019-07-15T17:40:02   adding 'mpathic/docs/source/_static/overrides.css'
2019-07-15T17:40:02   adding 'mpathic/examples/clean_dir.sh'
2019-07-15T17:40:03   adding 'mpathic/examples/data_set_simulated.txt'
2019-07-15T17:40:03   adding 'mpathic/examples/data_set_simulated1.txt'
2019-07-15T17:40:06   adding 'mpathic/examples/genome_ecoli.fa'
2019-07-15T17:40:07   adding 'mpathic/examples/genome_ecoli_1000lines.fa'
2019-07-15T17:40:07   adding 'mpathic/examples/genome_ecoli_100lines.fa'
2019-07-15T17:40:07   adding 'mpathic/examples/matrix_model.txt'
2019-07-15T17:40:07   adding 'mpathic/examples/si_pipeline.sh'
2019-07-15T17:40:07   adding 'mpathic/examples/ss_input.txt'
2019-07-15T17:40:07   adding 'mpathic/examples/ss_model.txt'
2019-07-15T17:40:07   adding 'mpathic/examples/true_model.txt'
2019-07-15T17:40:07   adding 'mpathic/src/.DS_Store'
2019-07-15T17:40:07   adding 'mpathic/src/EstimateMutualInfoforMImax.py'
2019-07-15T17:40:07   adding 'mpathic/src/EstimateMutualInfoforMImax.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/Models.py'
2019-07-15T17:40:07   adding 'mpathic/src/Models.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/OLD_profile_info.py'
2019-07-15T17:40:07   adding 'mpathic/src/__init__.py'
2019-07-15T17:40:07   adding 'mpathic/src/__init__.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/_nsb.py'
2019-07-15T17:40:07   adding 'mpathic/src/_nsb.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/draw.py'
2019-07-15T17:40:07   adding 'mpathic/src/evaluate_model.py'
2019-07-15T17:40:07   adding 'mpathic/src/evaluate_model.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/fast.c'
2019-07-15T17:40:07   adding 'mpathic/src/fast.cpython-36m-darwin.so'
2019-07-15T17:40:07   adding 'mpathic/src/fast.cpython-37m-arm-linux-gnueabihf.so'
2019-07-15T17:40:07   adding 'mpathic/src/fast.pyx'
2019-07-15T17:40:07   adding 'mpathic/src/fast.so'
2019-07-15T17:40:07   adding 'mpathic/src/gauge.py'
2019-07-15T17:40:07   adding 'mpathic/src/gauge.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/info.py'
2019-07-15T17:40:07   adding 'mpathic/src/info.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/io_local.py'
2019-07-15T17:40:07   adding 'mpathic/src/io_local.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/io_local_class.py'
2019-07-15T17:40:07   adding 'mpathic/src/io_local_class.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/learn_model.py'
2019-07-15T17:40:07   adding 'mpathic/src/learn_model.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/numerics.py'
2019-07-15T17:40:07   adding 'mpathic/src/numerics.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/predictive_info.py'
2019-07-15T17:40:07   adding 'mpathic/src/predictive_info.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/predictiveinfo_old.py'
2019-07-15T17:40:07   adding 'mpathic/src/preprocess.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_activity.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_ct.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_ct.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/profile_freq.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_freq.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/profile_info.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_info.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/profile_mut.py'
2019-07-15T17:40:07   adding 'mpathic/src/profile_mut.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/qc.py'
2019-07-15T17:40:07   adding 'mpathic/src/qc.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/run_tests.py'
2019-07-15T17:40:07   adding 'mpathic/src/scan_model.py'
2019-07-15T17:40:07   adding 'mpathic/src/scan_model.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/setup.py'
2019-07-15T17:40:07   adding 'mpathic/src/simulate_expression.py'
2019-07-15T17:40:07   adding 'mpathic/src/simulate_library.py'
2019-07-15T17:40:07   adding 'mpathic/src/simulate_library.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/simulate_sort.py'
2019-07-15T17:40:07   adding 'mpathic/src/simulate_sort.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/sortseq_for_doc.py'
2019-07-15T17:40:07   adding 'mpathic/src/stepper.py'
2019-07-15T17:40:07   adding 'mpathic/src/stepper.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/test_error'
2019-07-15T17:40:07   adding 'mpathic/src/utils.py'
2019-07-15T17:40:07   adding 'mpathic/src/utils.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/validate.py'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/EstimateMutualInfoforMImax.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/Models.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/__init__.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/_nsb.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/evaluate_model.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/gauge.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/info.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/io_local.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/learn_model.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/numerics.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/predictive_info.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/profile_ct.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/profile_freq.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/profile_info.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/profile_mut.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/qc.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/scan_model.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/simulate_library.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/simulate_sort.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/stepper.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/__pycache__/utils.cpython-36.pyc'
2019-07-15T17:40:07   adding 'mpathic/src/build/temp.macosx-10.12-intel-2.7/fast.o'
2019-07-15T17:40:07   adding 'mpathic/src/build/temp.macosx-10.12-intel-2.7/helloworld.o'
2019-07-15T17:40:07   adding 'mpathic/src/build/temp.macosx-10.7-x86_64-3.6/fast.o'
2019-07-15T17:40:07   adding 'mpathic/src/junk/JUNK_gauge_fix.py'
2019-07-15T17:40:07   adding 'mpathic/src/junk/commands.txt'
2019-07-15T17:40:07   adding 'mpathic/src/junk/fast.c'
2019-07-15T17:40:07   adding 'mpathic/src/junk/fast.cpython-36m-darwin.so'
2019-07-15T17:40:07   adding 'mpathic/src/junk/fast.pyx'
2019-07-15T17:40:08   adding 'mpathic/src/junk/fast.so'
2019-07-15T17:40:08   adding 'mpathic/src/junk/gauge_fix.py'
2019-07-15T17:40:08   adding 'mpathic/src/junk/gauge_fix.py~'
2019-07-15T17:40:08   adding 'mpathic/src/junk/work_for_justin_ars.txt'
2019-07-15T17:40:08   adding 'mpathic/tests/.DS_Store'
2019-07-15T17:40:08   adding 'mpathic/tests/__init__.py'
2019-07-15T17:40:08   adding 'mpathic/tests/__init__.pyc'
2019-07-15T17:40:08   adding 'mpathic/tests/functional_tests_mpathic.py'
2019-07-15T17:40:08   adding 'mpathic/tests/functional_tests_mpathic.pyc'
2019-07-15T17:40:08   adding 'mpathic/tests/test_error'
2019-07-15T17:40:08   adding 'mpathic-0.6.dist-info/LICENSE'
2019-07-15T17:40:08   adding 'mpathic-0.6.dist-info/METADATA'
2019-07-15T17:40:08   adding 'mpathic-0.6.dist-info/WHEEL'
2019-07-15T17:40:08   adding 'mpathic-0.6.dist-info/top_level.txt'
2019-07-15T17:40:08   adding 'mpathic-0.6.dist-info/RECORD'
2019-07-15T17:40:08   removing build/bdist.linux-armv7l/wheel
2019-07-15T17:40:08   Building wheel for mpathic (setup.py): finished with status 'done'
2019-07-15T17:40:08   Stored in directory: /tmp/tmpcdj3aox9
2019-07-15T17:40:08 Successfully built mpathic
2019-07-15T17:40:08 Cleaning up...
2019-07-15T17:40:08   Removing source in /tmp/pip-wheel-o7sjcxus/mpathic
2019-07-15T17:40:09 Removed build tracker '/tmp/pip-req-tracker-zck6frm3'