2019-07-16T02:10:56 Created temporary directory: /tmp/pip-ephem-wheel-cache-ejc8utba
2019-07-16T02:10:56 Created temporary directory: /tmp/pip-req-tracker-ygwa3zmr
2019-07-16T02:10:56 Created requirements tracker '/tmp/pip-req-tracker-ygwa3zmr'
2019-07-16T02:10:56 Created temporary directory: /tmp/pip-wheel-2hj70c8_
2019-07-16T02:10:56 Collecting padmet-utils==0.0.2
2019-07-16T02:10:56   1 location(s) to search for versions of padmet-utils:
2019-07-16T02:10:56   * https://pypi.org/simple/padmet-utils/
2019-07-16T02:10:56   Getting page https://pypi.org/simple/padmet-utils/
2019-07-16T02:10:57   Analyzing links from page https://pypi.org/simple/padmet-utils/
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/b9/07/d866e314476204140ffbf5c2398121c2c043619131a82cc31d004b4c33dc/padmet_utils-0.0.1.tar.gz#sha256=e027674acb51bb07b70e5997df8fae935f095bd08bea9607e3fc89fcce143093 (from https://pypi.org/simple/padmet-utils/), version: 0.0.1
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz#sha256=eb397d5ebc1cfe0eff780ebfbfd66596c63e90b847d242532c1eec6ec4b941ec (from https://pypi.org/simple/padmet-utils/), version: 0.0.2
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/a1/1c/cd4bc53eb7ad49ac40440c5ce143ccb59973486e52dfc64ee0ccbc4ec4ed/padmet_utils-0.0.3.tar.gz#sha256=1419ec66e02811e87a2068f38e2bf548ad67447b90c8c78cc56a7f50667b32f1 (from https://pypi.org/simple/padmet-utils/), version: 0.0.3
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/a7/cf/f0b3c22fe0f59bd14ce357e1b1608608270430141cf917921c81a9088946/padmet_utils-0.0.4.tar.gz#sha256=46ab787ef61be5de60cc3d77c5f65e08b21f8854b8d57dfcbe7911e70ff00693 (from https://pypi.org/simple/padmet-utils/), version: 0.0.4
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/85/04/d61bba894dfe6a305f915bbd8775b1a379eae0c0d98051771f9aa4f37b6b/padmet_utils-0.0.5.tar.gz#sha256=b2a89811369b9112cd1663a957d8f535112eafa81288b9f15bded087a82c334a (from https://pypi.org/simple/padmet-utils/), version: 0.0.5
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/db/35/b5c51a23ca0c0db706ec246b354606d4d2447cc60c2e7fcb3b5437e49bff/padmet_utils-0.0.6.tar.gz#sha256=2440af670b7d8212993eebe27b0b72d0db49ad3a86170431567793217a20c686 (from https://pypi.org/simple/padmet-utils/), version: 0.0.6
2019-07-16T02:10:57     Found link https://files.pythonhosted.org/packages/d3/5c/fde35ceaf1b88c704633d22100d01e0167f9fba1555a7a5922a4634341a4/padmet_utils-0.0.7.tar.gz#sha256=e5fe46a0ac9ba64747331b01a26d0af2fdff9d46aafc04e93892bd858ebefa64 (from https://pypi.org/simple/padmet-utils/), version: 0.0.7
2019-07-16T02:10:57   Using version 0.0.2 (newest of versions: 0.0.2)
2019-07-16T02:10:57   Created temporary directory: /tmp/pip-unpack-uazu_io3
2019-07-16T02:10:57   Downloading https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz (75kB)
2019-07-16T02:10:57   Downloading from URL https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz#sha256=eb397d5ebc1cfe0eff780ebfbfd66596c63e90b847d242532c1eec6ec4b941ec (from https://pypi.org/simple/padmet-utils/)
2019-07-16T02:10:57   Added padmet-utils==0.0.2 from https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz#sha256=eb397d5ebc1cfe0eff780ebfbfd66596c63e90b847d242532c1eec6ec4b941ec to build tracker '/tmp/pip-req-tracker-ygwa3zmr'
2019-07-16T02:10:57     Running setup.py (path:/tmp/pip-wheel-2hj70c8_/padmet-utils/setup.py) egg_info for package padmet-utils
2019-07-16T02:10:57     Running command python setup.py egg_info
2019-07-16T02:10:59     running egg_info
2019-07-16T02:10:59     creating pip-egg-info/padmet_utils.egg-info
2019-07-16T02:10:59     writing pip-egg-info/padmet_utils.egg-info/PKG-INFO
2019-07-16T02:10:59     writing dependency_links to pip-egg-info/padmet_utils.egg-info/dependency_links.txt
2019-07-16T02:10:59     writing top-level names to pip-egg-info/padmet_utils.egg-info/top_level.txt
2019-07-16T02:10:59     writing manifest file 'pip-egg-info/padmet_utils.egg-info/SOURCES.txt'
2019-07-16T02:11:00     reading manifest file 'pip-egg-info/padmet_utils.egg-info/SOURCES.txt'
2019-07-16T02:11:00     writing manifest file 'pip-egg-info/padmet_utils.egg-info/SOURCES.txt'
2019-07-16T02:11:00   Source in /tmp/pip-wheel-2hj70c8_/padmet-utils has version 0.0.2, which satisfies requirement padmet-utils==0.0.2 from https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz#sha256=eb397d5ebc1cfe0eff780ebfbfd66596c63e90b847d242532c1eec6ec4b941ec
2019-07-16T02:11:00   Removed padmet-utils==0.0.2 from https://files.pythonhosted.org/packages/41/94/4da6dbb279f7615825f9c22766a8c6f20e3d72f3bd225b8ff4f841131e10/padmet_utils-0.0.2.tar.gz#sha256=eb397d5ebc1cfe0eff780ebfbfd66596c63e90b847d242532c1eec6ec4b941ec from build tracker '/tmp/pip-req-tracker-ygwa3zmr'
2019-07-16T02:11:00 Building wheels for collected packages: padmet-utils
2019-07-16T02:11:00   Created temporary directory: /tmp/pip-wheel-0h_j5nrj
2019-07-16T02:11:00   Building wheel for padmet-utils (setup.py): started
2019-07-16T02:11:00   Destination directory: /tmp/pip-wheel-0h_j5nrj
2019-07-16T02:11:00   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-2hj70c8_/padmet-utils/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-0h_j5nrj
2019-07-16T02:11:02   running bdist_wheel
2019-07-16T02:11:02   running build
2019-07-16T02:11:02   running build_py
2019-07-16T02:11:02   creating build
2019-07-16T02:11:02   creating build/lib
2019-07-16T02:11:02   creating build/lib/padmet_utils
2019-07-16T02:11:02   copying padmet_utils/__init__.py -> build/lib/padmet_utils
2019-07-16T02:11:02   creating build/lib/padmet_utils/wiki
2019-07-16T02:11:02   copying padmet_utils/wiki/__init__.py -> build/lib/padmet_utils/wiki
2019-07-16T02:11:02   copying padmet_utils/wiki/load_aureme.py -> build/lib/padmet_utils/wiki
2019-07-16T02:11:02   creating build/lib/padmet_utils/scripts
2019-07-16T02:11:02   copying padmet_utils/scripts/__init__.py -> build/lib/padmet_utils/scripts
2019-07-16T02:11:02   creating build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/post_pantograph_gbr.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/genesfba3.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/__init__.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/sbmlGenerator.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/enhanced_sgs_output.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/gene_to_targets.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/pre_pantograph.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/biggAPI_to_padmet.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/wikiGenerator.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/extract_rxn_with_gene_assoc.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/gbk_to_faa.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/modelSeed_to_padmet.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/enhanced_meneco_output.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/padmet_to_matrix.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/biggAPI_temp.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/padmet_to_padmet.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/padmet_to_tsv.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:02   copying padmet_utils/scripts/connection/padmet_to_asp.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying padmet_utils/scripts/connection/grammar-boolean-rapsody.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying padmet_utils/scripts/connection/pgdb_to_padmet.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying padmet_utils/scripts/connection/sbml_to_curation_form.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying padmet_utils/scripts/connection/sbml_to_padmet.py -> build/lib/padmet_utils/scripts/connection
2019-07-16T02:11:03   creating build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/flux_analysis.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/visu_path.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/__init__.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/compare_sbml.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/get_pwy_from_rxn.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/padmet_stats.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/dendrogram_reactions_distance.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/report_network.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/convert_sbml_db.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/compare_padmet.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying padmet_utils/scripts/exploration/compare_sbml_padmet.py -> build/lib/padmet_utils/scripts/exploration
2019-07-16T02:11:03   creating build/lib/padmet_utils/scripts/management
2019-07-16T02:11:03   copying padmet_utils/scripts/management/manual_curation.py -> build/lib/padmet_utils/scripts/management
2019-07-16T02:11:03   copying padmet_utils/scripts/management/__init__.py -> build/lib/padmet_utils/scripts/management
2019-07-16T02:11:03   copying padmet_utils/scripts/management/padmet_compart.py -> build/lib/padmet_utils/scripts/management
2019-07-16T02:11:03   copying padmet_utils/scripts/management/padmet_medium.py -> build/lib/padmet_utils/scripts/management
2019-07-16T02:11:03   installing to build/bdist.linux-armv7l/wheel
2019-07-16T02:11:03   running install
2019-07-16T02:11:03   running install_lib
2019-07-16T02:11:03   creating build/bdist.linux-armv7l
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils
2019-07-16T02:11:03   copying build/lib/padmet_utils/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils/wiki
2019-07-16T02:11:03   copying build/lib/padmet_utils/wiki/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils/wiki
2019-07-16T02:11:03   copying build/lib/padmet_utils/wiki/load_aureme.py -> build/bdist.linux-armv7l/wheel/padmet_utils/wiki
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils/scripts
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/post_pantograph_gbr.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/genesfba3.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/sbmlGenerator.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/enhanced_sgs_output.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/gene_to_targets.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/pre_pantograph.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/biggAPI_to_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/wikiGenerator.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/extract_rxn_with_gene_assoc.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/gbk_to_faa.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/modelSeed_to_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/enhanced_meneco_output.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/padmet_to_matrix.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/biggAPI_temp.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/padmet_to_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/padmet_to_tsv.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/padmet_to_asp.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/grammar-boolean-rapsody.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/pgdb_to_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/sbml_to_curation_form.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/connection/sbml_to_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/connection
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/flux_analysis.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/visu_path.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/compare_sbml.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/get_pwy_from_rxn.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/padmet_stats.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/dendrogram_reactions_distance.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/report_network.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/convert_sbml_db.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/compare_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/exploration/compare_sbml_padmet.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/exploration
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils/scripts/management
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/management/manual_curation.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/management
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/management/__init__.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/management
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/management/padmet_compart.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/management
2019-07-16T02:11:03   copying build/lib/padmet_utils/scripts/management/padmet_medium.py -> build/bdist.linux-armv7l/wheel/padmet_utils/scripts/management
2019-07-16T02:11:03   running install_egg_info
2019-07-16T02:11:03   running egg_info
2019-07-16T02:11:03   writing dependency_links to padmet_utils.egg-info/dependency_links.txt
2019-07-16T02:11:03   writing top-level names to padmet_utils.egg-info/top_level.txt
2019-07-16T02:11:03   writing padmet_utils.egg-info/PKG-INFO
2019-07-16T02:11:03   reading manifest file 'padmet_utils.egg-info/SOURCES.txt'
2019-07-16T02:11:03   writing manifest file 'padmet_utils.egg-info/SOURCES.txt'
2019-07-16T02:11:03   Copying padmet_utils.egg-info to build/bdist.linux-armv7l/wheel/padmet_utils-0.0.2-py3.5.egg-info
2019-07-16T02:11:03   running install_scripts
2019-07-16T02:11:03   creating build/bdist.linux-armv7l/wheel/padmet_utils-0.0.2.dist-info/WHEEL
2019-07-16T02:11:04   Building wheel for padmet-utils (setup.py): finished with status 'done'
2019-07-16T02:11:04   Stored in directory: /tmp/tmpwzh02xv2
2019-07-16T02:11:04 Successfully built padmet-utils
2019-07-16T02:11:04 Cleaning up...
2019-07-16T02:11:04   Removing source in /tmp/pip-wheel-2hj70c8_/padmet-utils
2019-07-16T02:11:04 Removed build tracker '/tmp/pip-req-tracker-ygwa3zmr'