2019-07-16T07:21:06 Created temporary directory: /tmp/pip-ephem-wheel-cache-ereaevx_
2019-07-16T07:21:06 Created temporary directory: /tmp/pip-req-tracker-tnt0v8yf
2019-07-16T07:21:06 Created requirements tracker '/tmp/pip-req-tracker-tnt0v8yf'
2019-07-16T07:21:06 Created temporary directory: /tmp/pip-wheel-90xjq6u6
2019-07-16T07:21:06 Collecting genomepy==0.5.4
2019-07-16T07:21:06   1 location(s) to search for versions of genomepy:
2019-07-16T07:21:06   * https://pypi.org/simple/genomepy/
2019-07-16T07:21:06   Getting page https://pypi.org/simple/genomepy/
2019-07-16T07:21:06   Analyzing links from page https://pypi.org/simple/genomepy/
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/c0/49/e4aa0b64eda667bbd4c6fb3d0b6c6fb0d4a0ba03ceda3a4409a60f76d41b/genomepy-0.0.1.tar.gz#sha256=9383ef4d2d7b7c008bf4150674c6058efa434235e4c08f2f1b201b888e424389 (from https://pypi.org/simple/genomepy/), version: 0.0.1
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/f5/51/e073d9fd991f7048af595c0655947eb6b94aea4e8d6a498bb8fc6558b7c3/genomepy-0.0.2.tar.gz#sha256=f3b31d979129c9314d36803c2311d33138a5a2e70286ca86341733c09b855697 (from https://pypi.org/simple/genomepy/), version: 0.0.2
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/8b/f7/2ff0b588d992e55b034d2dd38d0c2b25b3101edb14f49aae15969f5162ad/genomepy-0.2.1.tar.gz#sha256=2eac89557e658e6843350a56d14fbde23dfd44b1b5d7e20ba8b166fcbf2a3df7 (from https://pypi.org/simple/genomepy/), version: 0.2.1
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/10/64/a5bcce920dbd4d139e719692932e2b3b390b7fa843eb4d2c7dac8f46c16c/genomepy-0.2.2.tar.gz#sha256=cc66cd4ecae6db0fa339e3d806556a7a75515d1df640a226e633770bf1f64f34 (from https://pypi.org/simple/genomepy/), version: 0.2.2
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/73/5c/c9658f1df6016c0d9e3fa1b8bf9e02b5cff3402e9a18695ce23c778506ae/genomepy-0.2.3.tar.gz#sha256=3ed3405fc627a0f107c29c79e832e33517c0ea64a5a9f69a63eb8ceec1d2267d (from https://pypi.org/simple/genomepy/), version: 0.2.3
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/8d/12/5a10995e86898b161b1e2e402adbe48e3d1b1e186dc7da520371fff8ee82/genomepy-0.3.0.tar.gz#sha256=bc381751e7cef7d2d825ed46135fcda8c7c0af81a9aa22af8efb6d7b498051a8 (from https://pypi.org/simple/genomepy/), version: 0.3.0
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/7c/b2/e5bd26c22ac60d21cebfce9716f3817927e675d31bf9e8a6f2e9d28161cc/genomepy-0.3.1.tar.gz#sha256=3ebdfca46504bedd1edfdb938d8c779a67fc7e1da0287c360c71b8b7434f2dd1 (from https://pypi.org/simple/genomepy/), version: 0.3.1
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/5a/a0/e2be6ce2c7bf329fa6cafe2885056bcb6f2454b89770d12c4680b5aa6045/genomepy-0.4.0.tar.gz#sha256=81cf2885b47812bfcf1194647f7f2cb3ee35c094c91b7c00db45ff3430592998 (from https://pypi.org/simple/genomepy/), version: 0.4.0
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/7b/e5/bad5d131f07fe68cdfc4284da5aa003751b8a29295b0e07b652d3990d93f/genomepy-0.5.0.tar.gz#sha256=873143fe108f98c44c013c9137c594ccd8b6f09f43c62d8320932bfda824bce6 (from https://pypi.org/simple/genomepy/), version: 0.5.0
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/2f/84/48ab53e0ee9aada69d49305958acd9366c242af0ec41dab7a14c2496f3ee/genomepy-0.5.2.tar.gz#sha256=fa78b8d53b952ff200a6b7f7ed28aae64d57ef2a99bcb6df1bb4b16bef403895 (from https://pypi.org/simple/genomepy/), version: 0.5.2
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz#sha256=713846f815dcb5cae73851c00b4bc9a8e97c44cb6616b3719ed9c0bccb47eea8 (from https://pypi.org/simple/genomepy/), version: 0.5.4
2019-07-16T07:21:06     Found link https://files.pythonhosted.org/packages/39/01/16f3255ea9ee768d78237f9fb302ebc5591d5bbe459259ccfa508b8b5fa4/genomepy-0.5.5.tar.gz#sha256=f6eabb8834d45aff9f22c17178c45f7445b518821d6185b10cb4d1479688e5db (from https://pypi.org/simple/genomepy/), version: 0.5.5
2019-07-16T07:21:06   Using version 0.5.4 (newest of versions: 0.5.4)
2019-07-16T07:21:06   Created temporary directory: /tmp/pip-unpack-uc4pilr7
2019-07-16T07:21:06   Downloading https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz
2019-07-16T07:21:06   Downloading from URL https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz#sha256=713846f815dcb5cae73851c00b4bc9a8e97c44cb6616b3719ed9c0bccb47eea8 (from https://pypi.org/simple/genomepy/)
2019-07-16T07:21:07   Added genomepy==0.5.4 from https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz#sha256=713846f815dcb5cae73851c00b4bc9a8e97c44cb6616b3719ed9c0bccb47eea8 to build tracker '/tmp/pip-req-tracker-tnt0v8yf'
2019-07-16T07:21:07     Running setup.py (path:/tmp/pip-wheel-90xjq6u6/genomepy/setup.py) egg_info for package genomepy
2019-07-16T07:21:07     Running command python setup.py egg_info
2019-07-16T07:21:10     running egg_info
2019-07-16T07:21:10     creating pip-egg-info/genomepy.egg-info
2019-07-16T07:21:10     writing requirements to pip-egg-info/genomepy.egg-info/requires.txt
2019-07-16T07:21:10     writing entry points to pip-egg-info/genomepy.egg-info/entry_points.txt
2019-07-16T07:21:10     writing top-level names to pip-egg-info/genomepy.egg-info/top_level.txt
2019-07-16T07:21:10     writing pip-egg-info/genomepy.egg-info/PKG-INFO
2019-07-16T07:21:10     writing dependency_links to pip-egg-info/genomepy.egg-info/dependency_links.txt
2019-07-16T07:21:10     writing manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt'
2019-07-16T07:21:10     reading manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt'
2019-07-16T07:21:10     reading manifest template 'MANIFEST.in'
2019-07-16T07:21:10     writing manifest file 'pip-egg-info/genomepy.egg-info/SOURCES.txt'
2019-07-16T07:21:10     Maybe try:

2019-07-16T07:21:10         sudo apt-get install pandoc
2019-07-16T07:21:10     See http://johnmacfarlane.net/pandoc/installing.html
2019-07-16T07:21:10     for installation options
2019-07-16T07:21:10     ---------------------------------------------------------------

2019-07-16T07:21:10   Source in /tmp/pip-wheel-90xjq6u6/genomepy has version 0.5.4, which satisfies requirement genomepy==0.5.4 from https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz#sha256=713846f815dcb5cae73851c00b4bc9a8e97c44cb6616b3719ed9c0bccb47eea8
2019-07-16T07:21:10   Removed genomepy==0.5.4 from https://files.pythonhosted.org/packages/31/e0/7e7aba592687fe2b167f9b252a203cb87a2cd79631d10a73219e55c45885/genomepy-0.5.4.tar.gz#sha256=713846f815dcb5cae73851c00b4bc9a8e97c44cb6616b3719ed9c0bccb47eea8 from build tracker '/tmp/pip-req-tracker-tnt0v8yf'
2019-07-16T07:21:10 Building wheels for collected packages: genomepy
2019-07-16T07:21:10   Created temporary directory: /tmp/pip-wheel-zx4wycfb
2019-07-16T07:21:10   Building wheel for genomepy (setup.py): started
2019-07-16T07:21:10   Destination directory: /tmp/pip-wheel-zx4wycfb
2019-07-16T07:21:10   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-90xjq6u6/genomepy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zx4wycfb
2019-07-16T07:21:13   Maybe try:

2019-07-16T07:21:13       sudo apt-get install pandoc
2019-07-16T07:21:13   See http://johnmacfarlane.net/pandoc/installing.html
2019-07-16T07:21:13   for installation options
2019-07-16T07:21:13   ---------------------------------------------------------------

2019-07-16T07:21:13   running bdist_wheel
2019-07-16T07:21:13   running build
2019-07-16T07:21:13   running build_py
2019-07-16T07:21:14   creating build
2019-07-16T07:21:14   creating build/lib
2019-07-16T07:21:14   creating build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/__about__.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/exceptions.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/utils.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/__init__.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/cli.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/functions.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/plugin.py -> build/lib/genomepy
2019-07-16T07:21:14   copying genomepy/provider.py -> build/lib/genomepy
2019-07-16T07:21:14   creating build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/sizes.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/__init__.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/gaps.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/bwa.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/bowtie2.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/hisat2.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/gmap.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   copying genomepy/plugins/minimap2.py -> build/lib/genomepy/plugins
2019-07-16T07:21:14   creating build/lib/genomepy/cfg
2019-07-16T07:21:14   copying genomepy/cfg/default.yaml -> build/lib/genomepy/cfg
2019-07-16T07:21:14   installing to build/bdist.linux-armv7l/wheel
2019-07-16T07:21:14   running install
2019-07-16T07:21:14   running install_lib
2019-07-16T07:21:14   creating build/bdist.linux-armv7l
2019-07-16T07:21:14   creating build/bdist.linux-armv7l/wheel
2019-07-16T07:21:14   creating build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/__about__.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/exceptions.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/utils.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/__init__.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/cli.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/functions.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   creating build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/sizes.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/gaps.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/bwa.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/bowtie2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/hisat2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/gmap.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   copying build/lib/genomepy/plugins/minimap2.py -> build/bdist.linux-armv7l/wheel/genomepy/plugins
2019-07-16T07:21:14   creating build/bdist.linux-armv7l/wheel/genomepy/cfg
2019-07-16T07:21:14   copying build/lib/genomepy/cfg/default.yaml -> build/bdist.linux-armv7l/wheel/genomepy/cfg
2019-07-16T07:21:14   copying build/lib/genomepy/plugin.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   copying build/lib/genomepy/provider.py -> build/bdist.linux-armv7l/wheel/genomepy
2019-07-16T07:21:14   running install_egg_info
2019-07-16T07:21:14   running egg_info
2019-07-16T07:21:14   writing requirements to genomepy.egg-info/requires.txt
2019-07-16T07:21:14   writing dependency_links to genomepy.egg-info/dependency_links.txt
2019-07-16T07:21:14   writing genomepy.egg-info/PKG-INFO
2019-07-16T07:21:14   writing entry points to genomepy.egg-info/entry_points.txt
2019-07-16T07:21:14   writing top-level names to genomepy.egg-info/top_level.txt
2019-07-16T07:21:14   reading manifest file 'genomepy.egg-info/SOURCES.txt'
2019-07-16T07:21:14   reading manifest template 'MANIFEST.in'
2019-07-16T07:21:14   writing manifest file 'genomepy.egg-info/SOURCES.txt'
2019-07-16T07:21:14   Copying genomepy.egg-info to build/bdist.linux-armv7l/wheel/genomepy-0.5.4-py3.5.egg-info
2019-07-16T07:21:14   running install_scripts
2019-07-16T07:21:14   creating build/bdist.linux-armv7l/wheel/genomepy-0.5.4.dist-info/WHEEL
2019-07-16T07:21:15   Building wheel for genomepy (setup.py): finished with status 'done'
2019-07-16T07:21:15   Stored in directory: /tmp/tmpml6pt33d
2019-07-16T07:21:15 Successfully built genomepy
2019-07-16T07:21:15 Cleaning up...
2019-07-16T07:21:15   Removing source in /tmp/pip-wheel-90xjq6u6/genomepy
2019-07-16T07:21:15 Removed build tracker '/tmp/pip-req-tracker-tnt0v8yf'