2019-07-16T12:53:51 Created temporary directory: /tmp/pip-ephem-wheel-cache-jteb3joj 2019-07-16T12:53:51 Created temporary directory: /tmp/pip-req-tracker-bq39cpz2 2019-07-16T12:53:51 Created requirements tracker '/tmp/pip-req-tracker-bq39cpz2' 2019-07-16T12:53:51 Created temporary directory: /tmp/pip-wheel-vbfk64nf 2019-07-16T12:53:51 Collecting probabilistic2020==1.2.2 2019-07-16T12:53:51 1 location(s) to search for versions of probabilistic2020: 2019-07-16T12:53:51 * https://pypi.org/simple/probabilistic2020/ 2019-07-16T12:53:51 Getting page https://pypi.org/simple/probabilistic2020/ 2019-07-16T12:53:51 Analyzing links from page https://pypi.org/simple/probabilistic2020/ 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/fa/48/119e543efc590b5373a68dcb704f2b52df46a73746d5835c4f2c61b53e27/probabilistic2020-1.0.0.tar.gz#sha256=a3f7f6a5f969d966f2d391c8ff2ccee411788c3da95347d3762f669a51d12203 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.0 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/2e/00/5c9a5fe6050e17f4974d14df400ae7e93a62e8b37371b33af4f2e1a4c8f5/probabilistic2020-1.0.1.tar.gz#sha256=462357a1f7fb093bfaf5c538081449e7478ac034fc1ee8ff75e2ec30f02fd511 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.1 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/a0/b7/7879eb08ab3a4c3f630deb37b705a12074880afa7f0b8f7ad9c611cbeb50/probabilistic2020-1.0.2.tar.gz#sha256=832c15d3da3294c30c0bdafa71f0540cc4a16b8603bb53cb60698b6f0efb7fb1 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.2 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/dc/60/e3cb0c222d9f2a4fba7cfe9aa180095e689eda05ff5315201176c0f0813e/probabilistic2020-1.0.3.post1.tar.gz#sha256=42487a6e36a4b32a36b7ecfe3bdfb1d347211cc93e7652faf7480dd55713d33c (from https://pypi.org/simple/probabilistic2020/), version: 1.0.3.post1 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/b3/8b/d9a2de8ccb78f50bb9c2107a39b645472e156ef2b53bf7edea89ed243b4c/probabilistic2020-1.0.4.tar.gz#sha256=be3d5d06f97274543ee68dc0a1c79eab86d2c2ea9825b03cf6716f775a7cfad1 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.4 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/b8/50/de8d0ec282eb853467b5d01df38bc34b654a55349bfeca92744b1af51659/probabilistic2020-1.0.5.tar.gz#sha256=0dffe64edab37eff89e9f5c00ba858964d9cb765c096983b28950fe820c6a24d (from https://pypi.org/simple/probabilistic2020/), version: 1.0.5 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz#sha256=daa8401db708d6d892d2186752d3554a83fc2d822719d05f4eb772fa1d32f795 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.6 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/ba/85/aeb7d2b0a42d2572bef16ec4b54ab19025b14939f5d266319b88c9253f5a/probabilistic2020-1.0.7.tar.gz#sha256=f8985ba2bfc144156b4f30747d4648e9127e8b8983ba55baa94d6d5314a1218b (from https://pypi.org/simple/probabilistic2020/), version: 1.0.7 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/41/d7/a142a18c9676a20c5f309c027c39779f1e312f44af98a04c301d9862c6fb/probabilistic2020-1.1.0.tar.gz#sha256=240d10a6b6b906e479023c7c9ec0b203d3f885abc074fad23b66c2c1b299d8d2 (from https://pypi.org/simple/probabilistic2020/), version: 1.1.0 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/96/5b/4a1b571cdf716507dc83b4b763df3b09a5def7562814d7aef8364ca5d270/probabilistic2020-1.1.1.tar.gz#sha256=befec6379d283e5e3b1c607941540f3a4f7e46c671706181e13783f6973abbc0 (from https://pypi.org/simple/probabilistic2020/), version: 1.1.1 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/30/ff/feae37090012be833521cf374700b1609d102fd3dfa8b5690ee657c9708f/probabilistic2020-1.2.0.tar.gz#sha256=12e0f9dc3fc47ed2b6edf2d4c9106c20ab442c6282b1b1d51c0146e61362bd49 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.0 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz#sha256=65e32e4aa5d0f7b93bf0aa649c35524a9503906731c05dc55b179a1ba29ffa30 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.1 2019-07-16T12:53:51 Found link https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.2 2019-07-16T12:53:51 Using version 1.2.2 (newest of versions: 1.2.2) 2019-07-16T12:53:51 Created temporary directory: /tmp/pip-unpack-vhro301x 2019-07-16T12:53:51 Downloading https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz (185kB) 2019-07-16T12:53:51 Downloading from URL https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 (from https://pypi.org/simple/probabilistic2020/) 2019-07-16T12:53:51 Added probabilistic2020==1.2.2 from https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 to build tracker '/tmp/pip-req-tracker-bq39cpz2' 2019-07-16T12:53:51 Running setup.py (path:/tmp/pip-wheel-vbfk64nf/probabilistic2020/setup.py) egg_info for package probabilistic2020 2019-07-16T12:53:51 Running command python setup.py egg_info 2019-07-16T12:53:53 running egg_info 2019-07-16T12:53:53 creating pip-egg-info/probabilistic2020.egg-info 2019-07-16T12:53:53 writing pip-egg-info/probabilistic2020.egg-info/PKG-INFO 2019-07-16T12:53:53 writing dependency_links to pip-egg-info/probabilistic2020.egg-info/dependency_links.txt 2019-07-16T12:53:53 writing entry points to pip-egg-info/probabilistic2020.egg-info/entry_points.txt 2019-07-16T12:53:53 writing requirements to pip-egg-info/probabilistic2020.egg-info/requires.txt 2019-07-16T12:53:53 writing top-level names to pip-egg-info/probabilistic2020.egg-info/top_level.txt 2019-07-16T12:53:53 writing manifest file 'pip-egg-info/probabilistic2020.egg-info/SOURCES.txt' 2019-07-16T12:53:54 reading manifest file 'pip-egg-info/probabilistic2020.egg-info/SOURCES.txt' 2019-07-16T12:53:54 reading manifest template 'MANIFEST.in' 2019-07-16T12:53:54 warning: no files found matching 'prob2020/console/frameshift_lrt.R' 2019-07-16T12:53:54 writing manifest file 'pip-egg-info/probabilistic2020.egg-info/SOURCES.txt' 2019-07-16T12:53:54 Source in /tmp/pip-wheel-vbfk64nf/probabilistic2020 has version 1.2.2, which satisfies requirement probabilistic2020==1.2.2 from https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 2019-07-16T12:53:54 Removed probabilistic2020==1.2.2 from https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 from build tracker '/tmp/pip-req-tracker-bq39cpz2' 2019-07-16T12:53:54 Building wheels for collected packages: probabilistic2020 2019-07-16T12:53:54 Created temporary directory: /tmp/pip-wheel-95z6vk0m 2019-07-16T12:53:54 Building wheel for probabilistic2020 (setup.py): started 2019-07-16T12:53:54 Destination directory: /tmp/pip-wheel-95z6vk0m 2019-07-16T12:53:54 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-vbfk64nf/probabilistic2020/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-95z6vk0m 2019-07-16T12:53:56 running bdist_wheel 2019-07-16T12:53:56 running build 2019-07-16T12:53:56 running build_py 2019-07-16T12:53:56 creating build 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7/prob2020 2019-07-16T12:53:56 copying prob2020/__init__.py -> build/lib.linux-armv7l-3.7/prob2020 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/utils.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/annotate.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/p_value.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/process_result.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/gene_sequence.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/permutation.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/mutation_context.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/amino_acid.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/count_frameshifts.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/sequence_context.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/bed_line.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/mymath.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/indel.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/scores.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 copying prob2020/python/__init__.py -> build/lib.linux-armv7l-3.7/prob2020/python 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7/prob2020/cython 2019-07-16T12:53:56 copying prob2020/cython/__init__.py -> build/lib.linux-armv7l-3.7/prob2020/cython 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7/prob2020/cpp 2019-07-16T12:53:56 copying prob2020/cpp/__init__.py -> build/lib.linux-armv7l-3.7/prob2020/cpp 2019-07-16T12:53:56 creating build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/annotate.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/extract_gene_seq.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/randomization_test.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/probabilistic2020.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/count_frameshifts.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/simulate_non_silent_ratio.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 copying prob2020/console/__init__.py -> build/lib.linux-armv7l-3.7/prob2020/console 2019-07-16T12:53:56 running build_ext 2019-07-16T12:53:57 building 'prob2020.cython.cutils' extension 2019-07-16T12:53:57 creating build/temp.linux-armv7l-3.7 2019-07-16T12:53:57 creating build/temp.linux-armv7l-3.7/prob2020 2019-07-16T12:53:57 creating build/temp.linux-armv7l-3.7/prob2020/cython 2019-07-16T12:53:57 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iprob2020/cpp/ -Iprob2020/cython/ -I/home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c prob2020/cython/cutils.cpp -o build/temp.linux-armv7l-3.7/prob2020/cython/cutils.o 2019-07-16T12:53:57 In file included from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-07-16T12:53:57 from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-07-16T12:53:57 from /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-07-16T12:53:57 from prob2020/cython/cutils.cpp:638: 2019-07-16T12:53:57 /home/piwheels/.local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-07-16T12:53:57 #warning "Using deprecated NumPy API, disable it with " \ 2019-07-16T12:53:57 ^~~~~~~ 2019-07-16T12:53:59 In file included from prob2020/cython/cutils.cpp:640: 2019-07-16T12:53:59 prob2020/cpp/permutation.hpp: In function ‘std::map, double> calc_effect_statistics(std::map, float, int, int)’: 2019-07-16T12:53:59 prob2020/cpp/permutation.hpp:121:33: warning: unused variable ‘myent_e’ [-Wunused-variable] 2019-07-16T12:53:59 long double myent_2 = 0.0L, myent_e = 0.0L, mysum = 0.0L, p = 0.0L; 2019-07-16T12:53:59 ^~~~~~~ 2019-07-16T12:53:59 prob2020/cpp/permutation.hpp:123:17: warning: unused variable ‘delta_ent’ [-Wunused-variable] 2019-07-16T12:53:59 long double delta_ent = 0.0L; 2019-07-16T12:53:59 ^~~~~~~~~ 2019-07-16T12:54:36 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/prob2020/cython/cutils.o -o build/lib.linux-armv7l-3.7/prob2020/cython/cutils.cpython-37m-arm-linux-gnueabihf.so 2019-07-16T12:54:36 installing to build/bdist.linux-armv7l/wheel 2019-07-16T12:54:36 running install 2019-07-16T12:54:36 running install_lib 2019-07-16T12:54:36 creating build/bdist.linux-armv7l 2019-07-16T12:54:36 creating build/bdist.linux-armv7l/wheel 2019-07-16T12:54:36 creating build/bdist.linux-armv7l/wheel/prob2020 2019-07-16T12:54:36 creating build/bdist.linux-armv7l/wheel/prob2020/cython 2019-07-16T12:54:36 copying build/lib.linux-armv7l-3.7/prob2020/cython/cutils.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/prob2020/cython 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/cython/__init__.py -> build/bdist.linux-armv7l/wheel/prob2020/cython 2019-07-16T12:54:37 creating build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/utils.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/annotate.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/p_value.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/process_result.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/gene_sequence.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/permutation.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/mutation_context.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/amino_acid.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/count_frameshifts.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/sequence_context.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/bed_line.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/mymath.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/indel.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/scores.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/python/__init__.py -> build/bdist.linux-armv7l/wheel/prob2020/python 2019-07-16T12:54:37 creating build/bdist.linux-armv7l/wheel/prob2020/cpp 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/cpp/__init__.py -> build/bdist.linux-armv7l/wheel/prob2020/cpp 2019-07-16T12:54:37 creating build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/annotate.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/extract_gene_seq.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/randomization_test.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/probabilistic2020.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/count_frameshifts.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/simulate_non_silent_ratio.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/console/__init__.py -> build/bdist.linux-armv7l/wheel/prob2020/console 2019-07-16T12:54:37 copying build/lib.linux-armv7l-3.7/prob2020/__init__.py -> build/bdist.linux-armv7l/wheel/prob2020 2019-07-16T12:54:37 running install_egg_info 2019-07-16T12:54:37 running egg_info 2019-07-16T12:54:37 writing probabilistic2020.egg-info/PKG-INFO 2019-07-16T12:54:37 writing dependency_links to probabilistic2020.egg-info/dependency_links.txt 2019-07-16T12:54:37 writing entry points to probabilistic2020.egg-info/entry_points.txt 2019-07-16T12:54:37 writing requirements to probabilistic2020.egg-info/requires.txt 2019-07-16T12:54:37 writing top-level names to probabilistic2020.egg-info/top_level.txt 2019-07-16T12:54:37 reading manifest file 'probabilistic2020.egg-info/SOURCES.txt' 2019-07-16T12:54:37 reading manifest template 'MANIFEST.in' 2019-07-16T12:54:37 warning: no files found matching 'prob2020/console/frameshift_lrt.R' 2019-07-16T12:54:37 writing manifest file 'probabilistic2020.egg-info/SOURCES.txt' 2019-07-16T12:54:37 Copying probabilistic2020.egg-info to build/bdist.linux-armv7l/wheel/probabilistic2020-1.2.2-py3.7.egg-info 2019-07-16T12:54:37 running install_scripts 2019-07-16T12:54:37 creating build/bdist.linux-armv7l/wheel/probabilistic2020-1.2.2.dist-info/WHEEL 2019-07-16T12:54:37 creating '/tmp/pip-wheel-95z6vk0m/probabilistic2020-1.2.2-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-16T12:54:37 adding 'prob2020/__init__.py' 2019-07-16T12:54:37 adding 'prob2020/console/__init__.py' 2019-07-16T12:54:37 adding 'prob2020/console/annotate.py' 2019-07-16T12:54:37 adding 'prob2020/console/count_frameshifts.py' 2019-07-16T12:54:37 adding 'prob2020/console/extract_gene_seq.py' 2019-07-16T12:54:37 adding 'prob2020/console/probabilistic2020.py' 2019-07-16T12:54:37 adding 'prob2020/console/randomization_test.py' 2019-07-16T12:54:37 adding 'prob2020/console/simulate_non_silent_ratio.py' 2019-07-16T12:54:37 adding 'prob2020/cpp/__init__.py' 2019-07-16T12:54:37 adding 'prob2020/cython/__init__.py' 2019-07-16T12:54:37 adding 'prob2020/cython/cutils.cpython-37m-arm-linux-gnueabihf.so' 2019-07-16T12:54:37 adding 'prob2020/python/__init__.py' 2019-07-16T12:54:37 adding 'prob2020/python/amino_acid.py' 2019-07-16T12:54:37 adding 'prob2020/python/annotate.py' 2019-07-16T12:54:37 adding 'prob2020/python/bed_line.py' 2019-07-16T12:54:37 adding 'prob2020/python/count_frameshifts.py' 2019-07-16T12:54:37 adding 'prob2020/python/gene_sequence.py' 2019-07-16T12:54:37 adding 'prob2020/python/indel.py' 2019-07-16T12:54:37 adding 'prob2020/python/mutation_context.py' 2019-07-16T12:54:37 adding 'prob2020/python/mymath.py' 2019-07-16T12:54:37 adding 'prob2020/python/p_value.py' 2019-07-16T12:54:37 adding 'prob2020/python/permutation.py' 2019-07-16T12:54:37 adding 'prob2020/python/process_result.py' 2019-07-16T12:54:37 adding 'prob2020/python/scores.py' 2019-07-16T12:54:37 adding 'prob2020/python/sequence_context.py' 2019-07-16T12:54:37 adding 'prob2020/python/utils.py' 2019-07-16T12:54:37 adding 'probabilistic2020-1.2.2.dist-info/METADATA' 2019-07-16T12:54:37 adding 'probabilistic2020-1.2.2.dist-info/WHEEL' 2019-07-16T12:54:37 adding 'probabilistic2020-1.2.2.dist-info/entry_points.txt' 2019-07-16T12:54:37 adding 'probabilistic2020-1.2.2.dist-info/top_level.txt' 2019-07-16T12:54:37 adding 'probabilistic2020-1.2.2.dist-info/RECORD' 2019-07-16T12:54:37 removing build/bdist.linux-armv7l/wheel 2019-07-16T12:54:38 Building wheel for probabilistic2020 (setup.py): finished with status 'done' 2019-07-16T12:54:38 Stored in directory: /tmp/tmp3vnnq31d 2019-07-16T12:54:38 Successfully built probabilistic2020 2019-07-16T12:54:38 Cleaning up... 2019-07-16T12:54:38 Removing source in /tmp/pip-wheel-vbfk64nf/probabilistic2020 2019-07-16T12:54:38 Removed build tracker '/tmp/pip-req-tracker-bq39cpz2'