2019-07-16T13:31:28 Created temporary directory: /tmp/pip-ephem-wheel-cache-r1tpie3h
2019-07-16T13:31:28 Created temporary directory: /tmp/pip-req-tracker-nq6_x9w5
2019-07-16T13:31:28 Created requirements tracker '/tmp/pip-req-tracker-nq6_x9w5'
2019-07-16T13:31:28 Created temporary directory: /tmp/pip-wheel-sj13hhzk
2019-07-16T13:31:28 Collecting codon-harmony==0.9.5
2019-07-16T13:31:28   1 location(s) to search for versions of codon-harmony:
2019-07-16T13:31:28   * https://pypi.org/simple/codon-harmony/
2019-07-16T13:31:28   Getting page https://pypi.org/simple/codon-harmony/
2019-07-16T13:31:28   Analyzing links from page https://pypi.org/simple/codon-harmony/
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/b1/f0/c4e860f829c42f3a0696f4e128d17830619aac2cbd0a5dacfff1bc42d777/codon_harmony-0.9.2.tar.gz#sha256=c00d00172e7d162720ce21d776f0b516fe96e892692a1fe0eb97d1c46804c644 (from https://pypi.org/simple/codon-harmony/), version: 0.9.2
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/c4/84/41b01153cb73dbdc011b6b11901d039d7f885af5d9a42c951817e48d5893/codon_harmony-0.9.3.tar.gz#sha256=80631262d34a5cb69e78270232aa6a294b3b74c3c9128e1129524ddd14c8b468 (from https://pypi.org/simple/codon-harmony/), version: 0.9.3
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/b9/aa/38bd96e2c9ec09381d7406e6ef0c821cfacc549a34d70f3c45292fb6ebc5/codon_harmony-0.9.4.tar.gz#sha256=903535225bc68c647ee5bda5c887d72128abfbc2e679e6bae510211075a81c3b (from https://pypi.org/simple/codon-harmony/) (requires-python:>=3.6), version: 0.9.4
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz#sha256=17b503b3041fe97eaeef49ac3443104baa6ab5daba1c3abe8079ec2a93d255b1 (from https://pypi.org/simple/codon-harmony/) (requires-python:>=3.6), version: 0.9.5
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/2c/cd/a3da87c3ef7a881962e07039e1f7c682cdf19c11af8662ca2b07825bacdd/codon_harmony-0.9.6.tar.gz#sha256=d970b675e46fd2bd2ed0837d91bf178a4581515f0d8e90a08e78c7b238afe242 (from https://pypi.org/simple/codon-harmony/) (requires-python:>=3.6), version: 0.9.6
2019-07-16T13:31:29     Found link https://files.pythonhosted.org/packages/1c/cb/ea0fe9b327f78b4f419bd8549284ac30da6f2eb4a758f25547ba8f85ccf0/codon_harmony-1.0.0.tar.gz#sha256=b75d4f67e08868de02a6b2da2884fddd91fc27d8ef9311100bfdcf41133bcb0b (from https://pypi.org/simple/codon-harmony/) (requires-python:>=3.6), version: 1.0.0
2019-07-16T13:31:29   Using version 0.9.5 (newest of versions: 0.9.5)
2019-07-16T13:31:29   Created temporary directory: /tmp/pip-unpack-qyphodw3
2019-07-16T13:31:29   Downloading https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz
2019-07-16T13:31:29   Downloading from URL https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz#sha256=17b503b3041fe97eaeef49ac3443104baa6ab5daba1c3abe8079ec2a93d255b1 (from https://pypi.org/simple/codon-harmony/) (requires-python:>=3.6)
2019-07-16T13:31:29   Added codon-harmony==0.9.5 from https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz#sha256=17b503b3041fe97eaeef49ac3443104baa6ab5daba1c3abe8079ec2a93d255b1 to build tracker '/tmp/pip-req-tracker-nq6_x9w5'
2019-07-16T13:31:29     Running setup.py (path:/tmp/pip-wheel-sj13hhzk/codon-harmony/setup.py) egg_info for package codon-harmony
2019-07-16T13:31:29     Running command python setup.py egg_info
2019-07-16T13:31:31     running egg_info
2019-07-16T13:31:31     creating pip-egg-info/codon_harmony.egg-info
2019-07-16T13:31:31     writing pip-egg-info/codon_harmony.egg-info/PKG-INFO
2019-07-16T13:31:31     writing dependency_links to pip-egg-info/codon_harmony.egg-info/dependency_links.txt
2019-07-16T13:31:31     writing entry points to pip-egg-info/codon_harmony.egg-info/entry_points.txt
2019-07-16T13:31:31     writing requirements to pip-egg-info/codon_harmony.egg-info/requires.txt
2019-07-16T13:31:31     writing top-level names to pip-egg-info/codon_harmony.egg-info/top_level.txt
2019-07-16T13:31:31     writing manifest file 'pip-egg-info/codon_harmony.egg-info/SOURCES.txt'
2019-07-16T13:31:31     reading manifest file 'pip-egg-info/codon_harmony.egg-info/SOURCES.txt'
2019-07-16T13:31:31     reading manifest template 'MANIFEST.in'
2019-07-16T13:31:31     warning: no previously-included files matching '__pycache__' found under directory '*'
2019-07-16T13:31:31     warning: no previously-included files matching '*.py[co]' found under directory '*'
2019-07-16T13:31:31     warning: no files found matching '*.jpg' under directory 'docs'
2019-07-16T13:31:31     warning: no files found matching '*.png' under directory 'docs'
2019-07-16T13:31:31     warning: no files found matching '*.gif' under directory 'docs'
2019-07-16T13:31:31     writing manifest file 'pip-egg-info/codon_harmony.egg-info/SOURCES.txt'
2019-07-16T13:31:31   Source in /tmp/pip-wheel-sj13hhzk/codon-harmony has version 0.9.5, which satisfies requirement codon-harmony==0.9.5 from https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz#sha256=17b503b3041fe97eaeef49ac3443104baa6ab5daba1c3abe8079ec2a93d255b1
2019-07-16T13:31:31   Removed codon-harmony==0.9.5 from https://files.pythonhosted.org/packages/57/37/f6df6266bf257e15d27bf278bdded5134757df943d059941bb749a3571d9/codon_harmony-0.9.5.tar.gz#sha256=17b503b3041fe97eaeef49ac3443104baa6ab5daba1c3abe8079ec2a93d255b1 from build tracker '/tmp/pip-req-tracker-nq6_x9w5'
2019-07-16T13:31:31 Building wheels for collected packages: codon-harmony
2019-07-16T13:31:31   Created temporary directory: /tmp/pip-wheel-7swp5gq_
2019-07-16T13:31:31   Building wheel for codon-harmony (setup.py): started
2019-07-16T13:31:31   Destination directory: /tmp/pip-wheel-7swp5gq_
2019-07-16T13:31:31   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-sj13hhzk/codon-harmony/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7swp5gq_
2019-07-16T13:31:33   running bdist_wheel
2019-07-16T13:31:33   running build
2019-07-16T13:31:33   running build_py
2019-07-16T13:31:33   creating build
2019-07-16T13:31:33   creating build/lib
2019-07-16T13:31:33   creating build/lib/codon_harmony
2019-07-16T13:31:33   copying codon_harmony/__init__.py -> build/lib/codon_harmony
2019-07-16T13:31:33   copying codon_harmony/codon_harmony.py -> build/lib/codon_harmony
2019-07-16T13:31:33   creating build/lib/codon_harmony/data
2019-07-16T13:31:33   copying codon_harmony/data/__init__.py -> build/lib/codon_harmony/data
2019-07-16T13:31:33   creating build/lib/codon_harmony/util
2019-07-16T13:31:33   copying codon_harmony/util/seq.py -> build/lib/codon_harmony/util
2019-07-16T13:31:33   copying codon_harmony/util/__init__.py -> build/lib/codon_harmony/util
2019-07-16T13:31:33   copying codon_harmony/util/logging.py -> build/lib/codon_harmony/util
2019-07-16T13:31:33   copying codon_harmony/util/seq_opt.py -> build/lib/codon_harmony/util
2019-07-16T13:31:33   copying codon_harmony/util/codon_use.py -> build/lib/codon_harmony/util
2019-07-16T13:31:33   running egg_info
2019-07-16T13:31:33   writing codon_harmony.egg-info/PKG-INFO
2019-07-16T13:31:33   writing dependency_links to codon_harmony.egg-info/dependency_links.txt
2019-07-16T13:31:33   writing entry points to codon_harmony.egg-info/entry_points.txt
2019-07-16T13:31:33   writing requirements to codon_harmony.egg-info/requires.txt
2019-07-16T13:31:33   writing top-level names to codon_harmony.egg-info/top_level.txt
2019-07-16T13:31:33   reading manifest file 'codon_harmony.egg-info/SOURCES.txt'
2019-07-16T13:31:33   reading manifest template 'MANIFEST.in'
2019-07-16T13:31:33   warning: no previously-included files matching '__pycache__' found under directory '*'
2019-07-16T13:31:33   warning: no previously-included files matching '*.py[co]' found under directory '*'
2019-07-16T13:31:33   warning: no files found matching '*.jpg' under directory 'docs'
2019-07-16T13:31:33   warning: no files found matching '*.png' under directory 'docs'
2019-07-16T13:31:33   warning: no files found matching '*.gif' under directory 'docs'
2019-07-16T13:31:33   writing manifest file 'codon_harmony.egg-info/SOURCES.txt'
2019-07-16T13:31:33   installing to build/bdist.linux-armv7l/wheel
2019-07-16T13:31:33   running install
2019-07-16T13:31:33   running install_lib
2019-07-16T13:31:33   creating build/bdist.linux-armv7l
2019-07-16T13:31:33   creating build/bdist.linux-armv7l/wheel
2019-07-16T13:31:34   creating build/bdist.linux-armv7l/wheel/codon_harmony
2019-07-16T13:31:34   creating build/bdist.linux-armv7l/wheel/codon_harmony/data
2019-07-16T13:31:34   copying build/lib/codon_harmony/data/__init__.py -> build/bdist.linux-armv7l/wheel/codon_harmony/data
2019-07-16T13:31:34   copying build/lib/codon_harmony/__init__.py -> build/bdist.linux-armv7l/wheel/codon_harmony
2019-07-16T13:31:34   copying build/lib/codon_harmony/codon_harmony.py -> build/bdist.linux-armv7l/wheel/codon_harmony
2019-07-16T13:31:34   creating build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   copying build/lib/codon_harmony/util/seq.py -> build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   copying build/lib/codon_harmony/util/__init__.py -> build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   copying build/lib/codon_harmony/util/logging.py -> build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   copying build/lib/codon_harmony/util/seq_opt.py -> build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   copying build/lib/codon_harmony/util/codon_use.py -> build/bdist.linux-armv7l/wheel/codon_harmony/util
2019-07-16T13:31:34   running install_egg_info
2019-07-16T13:31:34   Copying codon_harmony.egg-info to build/bdist.linux-armv7l/wheel/codon_harmony-0.9.5-py3.7.egg-info
2019-07-16T13:31:34   running install_scripts
2019-07-16T13:31:34   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2019-07-16T13:31:34   adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
2019-07-16T13:31:34   creating build/bdist.linux-armv7l/wheel/codon_harmony-0.9.5.dist-info/WHEEL
2019-07-16T13:31:34   creating '/tmp/pip-wheel-7swp5gq_/codon_harmony-0.9.5-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-16T13:31:34   adding 'codon_harmony/__init__.py'
2019-07-16T13:31:34   adding 'codon_harmony/codon_harmony.py'
2019-07-16T13:31:34   adding 'codon_harmony/data/__init__.py'
2019-07-16T13:31:34   adding 'codon_harmony/util/__init__.py'
2019-07-16T13:31:34   adding 'codon_harmony/util/codon_use.py'
2019-07-16T13:31:34   adding 'codon_harmony/util/logging.py'
2019-07-16T13:31:34   adding 'codon_harmony/util/seq.py'
2019-07-16T13:31:34   adding 'codon_harmony/util/seq_opt.py'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/AUTHORS.rst'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/LICENSE'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/METADATA'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/WHEEL'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/entry_points.txt'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/top_level.txt'
2019-07-16T13:31:34   adding 'codon_harmony-0.9.5.dist-info/RECORD'
2019-07-16T13:31:34   removing build/bdist.linux-armv7l/wheel
2019-07-16T13:31:34   Building wheel for codon-harmony (setup.py): finished with status 'done'
2019-07-16T13:31:34   Stored in directory: /tmp/tmp27sgs4uj
2019-07-16T13:31:34 Successfully built codon-harmony
2019-07-16T13:31:34 Cleaning up...
2019-07-16T13:31:34   Removing source in /tmp/pip-wheel-sj13hhzk/codon-harmony
2019-07-16T13:31:34 Removed build tracker '/tmp/pip-req-tracker-nq6_x9w5'