2019-07-17T07:08:54 Created temporary directory: /tmp/pip-ephem-wheel-cache-mds8x5uf 2019-07-17T07:08:54 Created temporary directory: /tmp/pip-req-tracker-sujqg2i9 2019-07-17T07:08:54 Created requirements tracker '/tmp/pip-req-tracker-sujqg2i9' 2019-07-17T07:08:54 Created temporary directory: /tmp/pip-wheel-pwi807_a 2019-07-17T07:08:54 Collecting phyloinfer==0.4 2019-07-17T07:08:54 1 location(s) to search for versions of phyloinfer: 2019-07-17T07:08:54 * https://pypi.org/simple/phyloinfer/ 2019-07-17T07:08:54 Getting page https://pypi.org/simple/phyloinfer/ 2019-07-17T07:08:54 Analyzing links from page https://pypi.org/simple/phyloinfer/ 2019-07-17T07:08:54 Found link https://files.pythonhosted.org/packages/3d/c7/4c62a7336c2bd62d4ce3603ec9080b59e42bc9d979ca9f68e6748306cf5b/phyloinfer-0.1.tar.gz#sha256=1de7d13e94d51ad950bda48ab88e032a74ed3c6b194648858a42ba0e55b04722 (from https://pypi.org/simple/phyloinfer/), version: 0.1 2019-07-17T07:08:54 Found link https://files.pythonhosted.org/packages/1c/f9/2931ce5f4b68bcb8183db4bbf1e3c28edb630aac0bc6b27035214458e9c9/phyloinfer-0.2.tar.gz#sha256=fdff3f64b53bccfd4b9380592785f98459e098d080449bd4b8da5182c9432f10 (from https://pypi.org/simple/phyloinfer/), version: 0.2 2019-07-17T07:08:54 Found link https://files.pythonhosted.org/packages/75/05/71f72d5f15353e3b4ef7598970fe51539fafb8045230fbcc86e36af373bf/phyloinfer-0.3.tar.gz#sha256=cdf877297664812fc9bd00acba04880824cc2eed79c11cece7d6eb8ded8eea5b (from https://pypi.org/simple/phyloinfer/), version: 0.3 2019-07-17T07:08:54 Found link https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz#sha256=a913385b7dfd387d664114f59877201a0d0e6b0944dc17a92653b6c0034a4bb5 (from https://pypi.org/simple/phyloinfer/), version: 0.4 2019-07-17T07:08:54 Found link https://files.pythonhosted.org/packages/e9/07/3c6ff4e66ee8025a42589e74645991d1ea061184b8461f93d9ef96f51f85/phyloinfer-0.4.1.tar.gz#sha256=0b5aa02c76f9ac86c85f19b751900f9e28d4aa100a3a97c0d9992e30ff0b200a (from https://pypi.org/simple/phyloinfer/), version: 0.4.1 2019-07-17T07:08:54 Using version 0.4 (newest of versions: 0.4) 2019-07-17T07:08:54 Created temporary directory: /tmp/pip-unpack-kokfkdvc 2019-07-17T07:08:54 Downloading https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz 2019-07-17T07:08:54 Downloading from URL https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz#sha256=a913385b7dfd387d664114f59877201a0d0e6b0944dc17a92653b6c0034a4bb5 (from https://pypi.org/simple/phyloinfer/) 2019-07-17T07:08:54 Added phyloinfer==0.4 from https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz#sha256=a913385b7dfd387d664114f59877201a0d0e6b0944dc17a92653b6c0034a4bb5 to build tracker '/tmp/pip-req-tracker-sujqg2i9' 2019-07-17T07:08:54 Running setup.py (path:/tmp/pip-wheel-pwi807_a/phyloinfer/setup.py) egg_info for package phyloinfer 2019-07-17T07:08:54 Running command python setup.py egg_info 2019-07-17T07:08:56 running egg_info 2019-07-17T07:08:56 creating pip-egg-info/phyloinfer.egg-info 2019-07-17T07:08:56 writing pip-egg-info/phyloinfer.egg-info/PKG-INFO 2019-07-17T07:08:56 writing dependency_links to pip-egg-info/phyloinfer.egg-info/dependency_links.txt 2019-07-17T07:08:56 writing requirements to pip-egg-info/phyloinfer.egg-info/requires.txt 2019-07-17T07:08:56 writing top-level names to pip-egg-info/phyloinfer.egg-info/top_level.txt 2019-07-17T07:08:56 writing manifest file 'pip-egg-info/phyloinfer.egg-info/SOURCES.txt' 2019-07-17T07:08:56 reading manifest file 'pip-egg-info/phyloinfer.egg-info/SOURCES.txt' 2019-07-17T07:08:56 writing manifest file 'pip-egg-info/phyloinfer.egg-info/SOURCES.txt' 2019-07-17T07:08:57 Source in /tmp/pip-wheel-pwi807_a/phyloinfer has version 0.4, which satisfies requirement phyloinfer==0.4 from https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz#sha256=a913385b7dfd387d664114f59877201a0d0e6b0944dc17a92653b6c0034a4bb5 2019-07-17T07:08:57 Removed phyloinfer==0.4 from https://files.pythonhosted.org/packages/18/4c/69dbc72f06646c7c0c3f6cc9dacffc9a2a3856c0292ebebb87587bbbf9ba/phyloinfer-0.4.tar.gz#sha256=a913385b7dfd387d664114f59877201a0d0e6b0944dc17a92653b6c0034a4bb5 from build tracker '/tmp/pip-req-tracker-sujqg2i9' 2019-07-17T07:08:57 Building wheels for collected packages: phyloinfer 2019-07-17T07:08:57 Created temporary directory: /tmp/pip-wheel-jvdvp02r 2019-07-17T07:08:57 Building wheel for phyloinfer (setup.py): started 2019-07-17T07:08:57 Destination directory: /tmp/pip-wheel-jvdvp02r 2019-07-17T07:08:57 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-pwi807_a/phyloinfer/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-jvdvp02r 2019-07-17T07:08:58 running bdist_wheel 2019-07-17T07:08:58 running build 2019-07-17T07:08:58 running build_py 2019-07-17T07:08:59 creating build 2019-07-17T07:08:59 creating build/lib 2019-07-17T07:08:59 creating build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/refLeapfrog.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/branchManipulation.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/dataManipulation.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/__init__.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/treeManipulation.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/Logposterior.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/resultAnalysis.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/Logprior.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/rateMatrix.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/Loglikelihood.py -> build/lib/phyloinfer 2019-07-17T07:08:59 copying phyloinfer/phyloHMC.py -> build/lib/phyloinfer 2019-07-17T07:08:59 installing to build/bdist.linux-armv7l/wheel 2019-07-17T07:08:59 running install 2019-07-17T07:08:59 running install_lib 2019-07-17T07:08:59 creating build/bdist.linux-armv7l 2019-07-17T07:08:59 creating build/bdist.linux-armv7l/wheel 2019-07-17T07:08:59 creating build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/refLeapfrog.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/branchManipulation.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/dataManipulation.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/__init__.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/treeManipulation.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/Logposterior.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/resultAnalysis.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/Logprior.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/rateMatrix.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/Loglikelihood.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 copying build/lib/phyloinfer/phyloHMC.py -> build/bdist.linux-armv7l/wheel/phyloinfer 2019-07-17T07:08:59 running install_egg_info 2019-07-17T07:08:59 running egg_info 2019-07-17T07:08:59 writing phyloinfer.egg-info/PKG-INFO 2019-07-17T07:08:59 writing dependency_links to phyloinfer.egg-info/dependency_links.txt 2019-07-17T07:08:59 writing requirements to phyloinfer.egg-info/requires.txt 2019-07-17T07:08:59 writing top-level names to phyloinfer.egg-info/top_level.txt 2019-07-17T07:08:59 reading manifest file 'phyloinfer.egg-info/SOURCES.txt' 2019-07-17T07:08:59 writing manifest file 'phyloinfer.egg-info/SOURCES.txt' 2019-07-17T07:08:59 Copying phyloinfer.egg-info to build/bdist.linux-armv7l/wheel/phyloinfer-0.4-py3.7.egg-info 2019-07-17T07:08:59 running install_scripts 2019-07-17T07:08:59 creating build/bdist.linux-armv7l/wheel/phyloinfer-0.4.dist-info/WHEEL 2019-07-17T07:08:59 creating '/tmp/pip-wheel-jvdvp02r/phyloinfer-0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-17T07:08:59 adding 'phyloinfer/Loglikelihood.py' 2019-07-17T07:08:59 adding 'phyloinfer/Logposterior.py' 2019-07-17T07:08:59 adding 'phyloinfer/Logprior.py' 2019-07-17T07:08:59 adding 'phyloinfer/__init__.py' 2019-07-17T07:08:59 adding 'phyloinfer/branchManipulation.py' 2019-07-17T07:08:59 adding 'phyloinfer/dataManipulation.py' 2019-07-17T07:08:59 adding 'phyloinfer/phyloHMC.py' 2019-07-17T07:08:59 adding 'phyloinfer/rateMatrix.py' 2019-07-17T07:08:59 adding 'phyloinfer/refLeapfrog.py' 2019-07-17T07:08:59 adding 'phyloinfer/resultAnalysis.py' 2019-07-17T07:08:59 adding 'phyloinfer/treeManipulation.py' 2019-07-17T07:08:59 adding 'phyloinfer-0.4.dist-info/METADATA' 2019-07-17T07:08:59 adding 'phyloinfer-0.4.dist-info/WHEEL' 2019-07-17T07:08:59 adding 'phyloinfer-0.4.dist-info/top_level.txt' 2019-07-17T07:08:59 adding 'phyloinfer-0.4.dist-info/RECORD' 2019-07-17T07:08:59 removing build/bdist.linux-armv7l/wheel 2019-07-17T07:08:59 Building wheel for phyloinfer (setup.py): finished with status 'done' 2019-07-17T07:08:59 Stored in directory: /tmp/tmpu4x5cz7t 2019-07-17T07:08:59 Successfully built phyloinfer 2019-07-17T07:08:59 Cleaning up... 2019-07-17T07:08:59 Removing source in /tmp/pip-wheel-pwi807_a/phyloinfer 2019-07-17T07:08:59 Removed build tracker '/tmp/pip-req-tracker-sujqg2i9'