2019-07-17T16:24:28 Created temporary directory: /tmp/pip-ephem-wheel-cache-w3ew_4tm 2019-07-17T16:24:28 Created temporary directory: /tmp/pip-req-tracker-ojsohrn0 2019-07-17T16:24:28 Created requirements tracker '/tmp/pip-req-tracker-ojsohrn0' 2019-07-17T16:24:28 Created temporary directory: /tmp/pip-wheel-0n9694b2 2019-07-17T16:24:28 Collecting DeepGMAP==0.2.0 2019-07-17T16:24:28 1 location(s) to search for versions of DeepGMAP: 2019-07-17T16:24:28 * https://pypi.org/simple/deepgmap/ 2019-07-17T16:24:28 Getting page https://pypi.org/simple/deepgmap/ 2019-07-17T16:24:29 Analyzing links from page https://pypi.org/simple/deepgmap/ 2019-07-17T16:24:29 Found link https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 (from https://pypi.org/simple/deepgmap/), version: 0.2.0 2019-07-17T16:24:29 Using version 0.2.0 (newest of versions: 0.2.0) 2019-07-17T16:24:29 Created temporary directory: /tmp/pip-unpack-flebvs4h 2019-07-17T16:24:30 Downloading https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz (191kB) 2019-07-17T16:24:30 Downloading from URL https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 (from https://pypi.org/simple/deepgmap/) 2019-07-17T16:24:38 Added DeepGMAP==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 to build tracker '/tmp/pip-req-tracker-ojsohrn0' 2019-07-17T16:24:38 Running setup.py (path:/tmp/pip-wheel-0n9694b2/DeepGMAP/setup.py) egg_info for package DeepGMAP 2019-07-17T16:24:38 Running command python setup.py egg_info 2019-07-17T16:24:46 running egg_info 2019-07-17T16:24:46 creating pip-egg-info/DeepGMAP.egg-info 2019-07-17T16:24:46 writing pip-egg-info/DeepGMAP.egg-info/PKG-INFO 2019-07-17T16:24:46 writing dependency_links to pip-egg-info/DeepGMAP.egg-info/dependency_links.txt 2019-07-17T16:24:46 writing requirements to pip-egg-info/DeepGMAP.egg-info/requires.txt 2019-07-17T16:24:46 writing top-level names to pip-egg-info/DeepGMAP.egg-info/top_level.txt 2019-07-17T16:24:46 writing manifest file 'pip-egg-info/DeepGMAP.egg-info/SOURCES.txt' 2019-07-17T16:24:47 reading manifest file 'pip-egg-info/DeepGMAP.egg-info/SOURCES.txt' 2019-07-17T16:24:47 writing manifest file 'pip-egg-info/DeepGMAP.egg-info/SOURCES.txt' 2019-07-17T16:24:47 Error processing line 1 of /home/piwheels/.local/lib/python3.7/site-packages/zzz_register_dansk_encoding.pth: 2019-07-17T16:24:47 Traceback (most recent call last): 2019-07-17T16:24:47 File "/usr/lib/python3.7/site.py", line 174, in addpackage 2019-07-17T16:24:47 exec(line) 2019-07-17T16:24:47 File "", line 1, in 2019-07-17T16:24:47 ModuleNotFoundError: No module named 'dansk' 2019-07-17T16:24:47 Remainder of file ignored 2019-07-17T16:24:47 Source in /tmp/pip-wheel-0n9694b2/DeepGMAP has version 0.2.0, which satisfies requirement DeepGMAP==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 2019-07-17T16:24:47 Removed DeepGMAP==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 from build tracker '/tmp/pip-req-tracker-ojsohrn0' 2019-07-17T16:24:47 Building wheels for collected packages: DeepGMAP 2019-07-17T16:24:47 Created temporary directory: /tmp/pip-wheel-qufuk22v 2019-07-17T16:24:47 Building wheel for DeepGMAP (setup.py): started 2019-07-17T16:24:47 Destination directory: /tmp/pip-wheel-qufuk22v 2019-07-17T16:24:47 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-0n9694b2/DeepGMAP/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-qufuk22v 2019-07-17T16:24:47 Error processing line 1 of /home/piwheels/.local/lib/python3.7/site-packages/zzz_register_dansk_encoding.pth: 2019-07-17T16:24:48 Traceback (most recent call last): 2019-07-17T16:24:48 File "/usr/lib/python3.7/site.py", line 174, in addpackage 2019-07-17T16:24:48 exec(line) 2019-07-17T16:24:48 File "", line 1, in 2019-07-17T16:24:48 ModuleNotFoundError: No module named 'dansk' 2019-07-17T16:24:48 Remainder of file ignored 2019-07-17T16:24:54 running bdist_wheel 2019-07-17T16:24:54 running build 2019-07-17T16:24:54 running build_py 2019-07-17T16:24:54 creating build 2019-07-17T16:24:54 creating build/lib.linux-armv7l-3.7 2019-07-17T16:24:54 creating build/lib.linux-armv7l-3.7/deepgmap 2019-07-17T16:24:54 copying deepgmap/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap 2019-07-17T16:24:54 creating build/lib.linux-armv7l-3.7/deepgmap/train 2019-07-17T16:24:54 copying deepgmap/train/train_loop.py -> build/lib.linux-armv7l-3.7/deepgmap/train 2019-07-17T16:24:54 copying deepgmap/train/deepshark_local_oop_1d.py -> build/lib.linux-armv7l-3.7/deepgmap/train 2019-07-17T16:24:55 copying deepgmap/train/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap/train 2019-07-17T16:24:55 creating build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/danqfrss.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/basset.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/danqblock.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv4frssplus2.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/deepsea.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/danq3.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv3frss.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv4frssplus4.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/danq4.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv3rc.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv4frssplus.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:55 copying deepgmap/network_constructors/conv4.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/conv4frss.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/auc_calc.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/conv4frss3.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/danq.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/conv4frssplus3.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/template_model.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 copying deepgmap/network_constructors/conv4frss2.py -> build/lib.linux-armv7l-3.7/deepgmap/network_constructors 2019-07-17T16:24:56 creating build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/sequence_visualizer2.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/class_saliency_extraction.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/motif_compare2.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:56 copying deepgmap/post_train_tools/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/motif_compare.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/merge_bigwig.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/unpooling.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/activation_maximization.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/kernel_visualizer.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/precision_recall_handmade.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/randomize_labels.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/ROC_space_plotter3.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/ROC_space_plotter2.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/deconvolution_to_signal.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/kernel_visualizer2.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:57 copying deepgmap/post_train_tools/Clustering_analizer.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/sequence_visualizer.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/ROC_space_plotter.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/PCA.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 copying deepgmap/post_train_tools/predict.py -> build/lib.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:24:58 creating build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/bed_file_500.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/genome_labeling.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/setup.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:58 copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/genome_divider.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/remove_chr.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 copying deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:24:59 creating build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:24:59 copying deepgmap/misc/kernel_distribution_analizer.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:24:59 copying deepgmap/misc/gff_to_colored_bed.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:24:59 copying deepgmap/misc/edit_labeled_file.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/deepsea_anal.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/fix_fasta.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/__init__.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/fasta_file_from_labeled.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/dataset_checker_multiple_label.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/Constants.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/compare_deepsea_data.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/box_plot.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/randomdna2.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/pickup_pos_seq_region.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/spearman_r.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/optimal_frip_cutoff.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/bed_file_compare.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/bed_file_compare2.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/dataset_checker.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/small_tools.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/TSS_bedfile.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/randomdna.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:00 copying deepgmap/misc/reduce_negatives.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:01 copying deepgmap/misc/motif_logo_creator.py -> build/lib.linux-armv7l-3.7/deepgmap/misc 2019-07-17T16:25:01 running build_ext 2019-07-17T16:25:02 skipping 'deepgmap/data_preprocessing_tools/seq_to_binary2.c' Cython extension (up-to-date) 2019-07-17T16:25:02 building 'deepgmap.data_preprocessing_tools.seq_to_binary2' extension 2019-07-17T16:25:02 creating build/temp.linux-armv7l-3.7 2019-07-17T16:25:02 creating build/temp.linux-armv7l-3.7/deepgmap 2019-07-17T16:25:02 creating build/temp.linux-armv7l-3.7/deepgmap/data_preprocessing_tools 2019-07-17T16:25:02 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c deepgmap/data_preprocessing_tools/seq_to_binary2.c -o build/temp.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/seq_to_binary2.o 2019-07-17T16:25:23 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/seq_to_binary2.o -o build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-37m-arm-linux-gnueabihf.so 2019-07-17T16:25:24 skipping 'deepgmap/post_train_tools/cython_util.c' Cython extension (up-to-date) 2019-07-17T16:25:24 building 'deepgmap.post_train_tools.cython_util' extension 2019-07-17T16:25:24 creating build/temp.linux-armv7l-3.7/deepgmap/post_train_tools 2019-07-17T16:25:24 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c deepgmap/post_train_tools/cython_util.c -o build/temp.linux-armv7l-3.7/deepgmap/post_train_tools/cython_util.o 2019-07-17T16:25:59 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/deepgmap/post_train_tools/cython_util.o -o build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/cython_util.cpython-37m-arm-linux-gnueabihf.so 2019-07-17T16:26:00 running build_scripts 2019-07-17T16:26:00 creating build/scripts-3.7 2019-07-17T16:26:00 copying and adjusting bin/deepgmap -> build/scripts-3.7 2019-07-17T16:26:00 changing mode of build/scripts-3.7/deepgmap from 644 to 755 2019-07-17T16:26:00 installing to build/bdist.linux-armv7l/wheel 2019-07-17T16:26:00 running install 2019-07-17T16:26:00 running install_lib 2019-07-17T16:26:00 creating build/bdist.linux-armv7l 2019-07-17T16:26:00 creating build/bdist.linux-armv7l/wheel 2019-07-17T16:26:00 creating build/bdist.linux-armv7l/wheel/deepgmap 2019-07-17T16:26:00 creating build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:00 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:00 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:00 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/sequence_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/class_saliency_extraction.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/motif_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/motif_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/merge_bigwig.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/unpooling.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/activation_maximization.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:01 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/kernel_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/precision_recall_handmade.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/randomize_labels.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/cython_util.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/ROC_space_plotter3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/ROC_space_plotter2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:02 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/deconvolution_to_signal.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/kernel_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/Clustering_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/sequence_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/ROC_space_plotter.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/PCA.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:03 copying build/lib.linux-armv7l-3.7/deepgmap/post_train_tools/predict.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools 2019-07-17T16:26:04 creating build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/danqfrss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/basset.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/danqblock.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frssplus2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/danq3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv3frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:04 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frssplus4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/danq4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv3rc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frssplus.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/auc_calc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frss3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/danq.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:05 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frssplus3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/template_model.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/network_constructors/conv4frss2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap 2019-07-17T16:26:06 creating build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/bed_file_500.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/genome_labeling.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/setup.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/genome_divider.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:06 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/remove_chr.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools 2019-07-17T16:26:07 creating build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/kernel_distribution_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/gff_to_colored_bed.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/edit_labeled_file.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/deepsea_anal.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/fix_fasta.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/fasta_file_from_labeled.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/dataset_checker_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:07 copying build/lib.linux-armv7l-3.7/deepgmap/misc/Constants.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/compare_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/box_plot.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/randomdna2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/pickup_pos_seq_region.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/spearman_r.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/optimal_frip_cutoff.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/bed_file_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/bed_file_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/dataset_checker.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/small_tools.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/TSS_bedfile.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/randomdna.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/reduce_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/misc/motif_logo_creator.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc 2019-07-17T16:26:08 creating build/bdist.linux-armv7l/wheel/deepgmap/train 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/train/train_loop.py -> build/bdist.linux-armv7l/wheel/deepgmap/train 2019-07-17T16:26:08 copying build/lib.linux-armv7l-3.7/deepgmap/train/deepshark_local_oop_1d.py -> build/bdist.linux-armv7l/wheel/deepgmap/train 2019-07-17T16:26:09 copying build/lib.linux-armv7l-3.7/deepgmap/train/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/train 2019-07-17T16:26:09 running install_egg_info 2019-07-17T16:26:09 running egg_info 2019-07-17T16:26:09 writing DeepGMAP.egg-info/PKG-INFO 2019-07-17T16:26:09 writing dependency_links to DeepGMAP.egg-info/dependency_links.txt 2019-07-17T16:26:09 writing requirements to DeepGMAP.egg-info/requires.txt 2019-07-17T16:26:09 writing top-level names to DeepGMAP.egg-info/top_level.txt 2019-07-17T16:26:10 reading manifest file 'DeepGMAP.egg-info/SOURCES.txt' 2019-07-17T16:26:10 writing manifest file 'DeepGMAP.egg-info/SOURCES.txt' 2019-07-17T16:26:10 Copying DeepGMAP.egg-info to build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0-py3.7.egg-info 2019-07-17T16:26:10 running install_scripts 2019-07-17T16:26:11 creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data 2019-07-17T16:26:11 creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts 2019-07-17T16:26:11 copying build/scripts-3.7/deepgmap -> build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts 2019-07-17T16:26:11 changing mode of build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts/deepgmap to 755 2019-07-17T16:26:11 creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.dist-info/WHEEL 2019-07-17T16:26:11 creating '/tmp/pip-wheel-qufuk22v/DeepGMAP-0.2.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-07-17T16:26:11 adding 'DeepGMAP-0.2.0.data/scripts/deepgmap' 2019-07-17T16:26:11 adding 'deepgmap/__init__.py' 2019-07-17T16:26:11 adding 'deepgmap/data_preprocessing_tools/__init__.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/bed_file_500.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/genome_divider.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/genome_file_maker.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/genome_labeling.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/genome_labeling2.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/genome_labeling_compare.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/pick_one_chromosome.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/remove_chr.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/remove_excess_negatives.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/remove_variant_annotations.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/seq_to_binary.py' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-37m-arm-linux-gnueabihf.so' 2019-07-17T16:26:12 adding 'deepgmap/data_preprocessing_tools/setup.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/Constants.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/TSS_bedfile.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/__init__.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/bed_file_compare.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/bed_file_compare2.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/box_plot.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/compare_deepsea_data.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/dataset_checker.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/dataset_checker_multiple_label.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/deepsea_anal.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/edit_labeled_file.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/fasta_file_from_labeled.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/fix_fasta.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/gff_to_colored_bed.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/kernel_distribution_analizer.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/motif_logo_creator.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/optimal_frip_cutoff.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/pickup_pos_seq_region.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/randomdna.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/randomdna2.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/reduce_negatives.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/small_tools.py' 2019-07-17T16:26:12 adding 'deepgmap/misc/spearman_r.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/__init__.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/auc_calc.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/basset.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv3frss.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv3rc.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv4.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv4frss.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv4frss2.py' 2019-07-17T16:26:12 adding 'deepgmap/network_constructors/conv4frss3.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/conv4frssplus.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/conv4frssplus2.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/conv4frssplus3.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/conv4frssplus4.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/danq.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/danq3.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/danq4.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/danqblock.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/danqfrss.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/deepsea.py' 2019-07-17T16:26:13 adding 'deepgmap/network_constructors/template_model.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/Clustering_analizer.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/PCA.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/ROC_space_plotter.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/ROC_space_plotter2.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/ROC_space_plotter3.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/__init__.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/activation_maximization.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/class_saliency_extraction.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/compare_narrowPeak_scores.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/cython_util.cpython-37m-arm-linux-gnueabihf.so' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/deconv_deepshark_local3.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/deconv_deepshark_local4.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/deconv_deepshark_local_extend.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/deconvolution_to_signal.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/fimo_to_numpy_array.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/kernel_visualizer.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/kernel_visualizer2.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/merge_bigwig.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/motif_compare.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/motif_compare2.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/precision_recall_handmade.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/predict.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/randomize_labels.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/sequence_visualizer.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/sequence_visualizer2.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/trained_deepshark_local_pca.py' 2019-07-17T16:26:13 adding 'deepgmap/post_train_tools/unpooling.py' 2019-07-17T16:26:13 adding 'deepgmap/train/__init__.py' 2019-07-17T16:26:13 adding 'deepgmap/train/deepshark_local_oop_1d.py' 2019-07-17T16:26:14 adding 'deepgmap/train/train_loop.py' 2019-07-17T16:26:14 adding 'DeepGMAP-0.2.0.dist-info/METADATA' 2019-07-17T16:26:14 adding 'DeepGMAP-0.2.0.dist-info/WHEEL' 2019-07-17T16:26:14 adding 'DeepGMAP-0.2.0.dist-info/top_level.txt' 2019-07-17T16:26:14 adding 'DeepGMAP-0.2.0.dist-info/RECORD' 2019-07-17T16:26:14 removing build/bdist.linux-armv7l/wheel 2019-07-17T16:26:15 Building wheel for DeepGMAP (setup.py): finished with status 'done' 2019-07-17T16:26:15 Stored in directory: /tmp/tmptc6z332n 2019-07-17T16:26:15 Successfully built DeepGMAP 2019-07-17T16:26:15 Cleaning up... 2019-07-17T16:26:15 Removing source in /tmp/pip-wheel-0n9694b2/DeepGMAP 2019-07-17T16:26:17 Removed build tracker '/tmp/pip-req-tracker-ojsohrn0'