Created temporary directory: /tmp/pip-ephem-wheel-cache-nzyysqfb
Created temporary directory: /tmp/pip-req-tracker-qszjqjj3
Created requirements tracker '/tmp/pip-req-tracker-qszjqjj3'
Created temporary directory: /tmp/pip-wheel-ejfdc2ib
Collecting checkm-genome==1.0.18
  1 location(s) to search for versions of checkm-genome:
  * https://pypi.org/simple/checkm-genome/
  Getting page https://pypi.org/simple/checkm-genome/
  Analyzing links from page https://pypi.org/simple/checkm-genome/
    Found link https://files.pythonhosted.org/packages/28/18/bfa95eace6e39c78c3d59e9409a6a6bf5d6b8eb02a84fe8f1587a604cccc/checkm-genome-0.9.0.tar.gz#sha256=afdff4dfeb2702dfed0e82a79f47b892ca2a163667d1a3a76941b71eb47f23ab (from https://pypi.org/simple/checkm-genome/), version: 0.9.0
    Found link https://files.pythonhosted.org/packages/41/31/d1cbd54a0356a8cfabe59a3d932dc5bfc25c8a62d21e8a6c95ef5ee84a5d/checkm-genome-0.9.1.tar.gz#sha256=7aab3ef510bd9f98643b0ee9d40b39af9317860309025f28b0265617de769156 (from https://pypi.org/simple/checkm-genome/), version: 0.9.1
    Found link https://files.pythonhosted.org/packages/af/c9/61e0998688374f8155107e3e81cf8920658b72e2e97df8595beaf6dad498/checkm-genome-0.9.2.tar.gz#sha256=bb967c1332aee95335f68cf18320624229aead5aba1bd3141c3b9ece3acc0227 (from https://pypi.org/simple/checkm-genome/), version: 0.9.2
    Found link https://files.pythonhosted.org/packages/ae/51/c5173a5940663f1a25311584f322ccfd22148097eea896f3fe96071292a6/checkm-genome-0.9.4.tar.gz#sha256=60a1f602de2c50143d4a94f5e292963ff30e670f9651dda1253872d05e36d207 (from https://pypi.org/simple/checkm-genome/), version: 0.9.4
    Found link https://files.pythonhosted.org/packages/5c/d0/884dcda6dc25ec5b1a0dfb781b67dbf4c9cfbe2ab3ef3935b3d4cbbcd0e3/checkm-genome-0.9.5.tar.gz#sha256=b14743620f849368c2e6de3023de89bec4a45762cd5d579cf4fcd7343ac2a886 (from https://pypi.org/simple/checkm-genome/), version: 0.9.5
    Found link https://files.pythonhosted.org/packages/ec/7d/8ffd56d3ea47b908b869e7556f3ed2211bbd0f299ddb8bd34ee34c7cdfb2/checkm-genome-0.9.6.tar.gz#sha256=e91379d5f3ee8eb07e78d2a9b1bb44d7261ba13bc7d4ea87c8aad244b4d34570 (from https://pypi.org/simple/checkm-genome/), version: 0.9.6
    Found link https://files.pythonhosted.org/packages/5f/2b/d0283c04c98b60afb23a8e4220f4c99bdb5a5a4fa08e928d1e16cefc8c65/checkm-genome-0.9.7.tar.gz#sha256=c8f62d837a42be69688cb9145974ac15030addb6454a5a2843061672e9081b34 (from https://pypi.org/simple/checkm-genome/), version: 0.9.7
    Found link https://files.pythonhosted.org/packages/d4/0b/6b2bbcea9bb373f458ece939f7d999bbeaf47f6562f7a5b459f5b3de0ef0/checkm-genome-1.0.1.tar.gz#sha256=df1bb4217ff7039f901ba38cc92cf7e57a0c63793842bfe4fe618c7bde5c7c63 (from https://pypi.org/simple/checkm-genome/), version: 1.0.1
    Found link https://files.pythonhosted.org/packages/de/22/74f9a5f3c6716fb5df55e4ffe32addf3bf972771ee68e41d8b50f65bc45f/checkm-genome-1.0.2.tar.gz#sha256=ef49d0a63fde68fdad74279aa204e8b65cd0a227dca876b2f5b1c261d3c96c39 (from https://pypi.org/simple/checkm-genome/), version: 1.0.2
    Found link https://files.pythonhosted.org/packages/0f/28/0c0e639dbdabf29808615ffe781675b8c8376ffc176e3ec9060c53ee99bd/checkm-genome-1.0.3.tar.gz#sha256=c6a6fcc43d4360a37c94d1ec7531179378e55f6dcbe8c045509ff576d15a1e1d (from https://pypi.org/simple/checkm-genome/), version: 1.0.3
    Found link https://files.pythonhosted.org/packages/fe/e1/7821a08e9c5462181f4768eff196ceeab5b6cfdf40b09874cd7d42bc733d/checkm-genome-1.0.4.tar.gz#sha256=e036c7ac934de3fae1207f9fae4113cb11c87842b9477e711eba860de22ae773 (from https://pypi.org/simple/checkm-genome/), version: 1.0.4
    Found link https://files.pythonhosted.org/packages/d0/17/9442a51f37f3bb6f112b3dc03a6aaaca3417ec5ade8208abbccec7906757/checkm-genome-1.0.5.tar.gz#sha256=e0a08d570b3c46bd6b3d808b153ce87edae10153eef605ba879b131f0001958d (from https://pypi.org/simple/checkm-genome/), version: 1.0.5
    Found link https://files.pythonhosted.org/packages/55/62/35b519866fff020ef0b213e0665dc4d43cb1bb588a6575dd3270d3708095/checkm-genome-1.0.7.tar.gz#sha256=8bf038258c5b3429bcbafc1ef666d4a9ad3eaec5784213e41b46c2bdf3b0d00b (from https://pypi.org/simple/checkm-genome/), version: 1.0.7
    Found link https://files.pythonhosted.org/packages/e7/d4/18407c20a8f220428e9b2b42c9c5768321060965d790e2861b1a3550ac21/checkm-genome-1.0.8.tar.gz#sha256=9235dcc510139e7cf6350fa08e19c089837230a6fa7e35cf4bd3fa7ae6248ec8 (from https://pypi.org/simple/checkm-genome/), version: 1.0.8
    Found link https://files.pythonhosted.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz#sha256=7fdb06c803ac0933efbbc86a775a95445b3cb6bb7b09eae4f1ae7ec77cbfbaa1 (from https://pypi.org/simple/checkm-genome/), version: 1.0.10
    Found link https://files.pythonhosted.org/packages/da/37/38c9a10a61ed2657a798188c83674b813d90425c73091c0106b50ce18172/checkm-genome-1.0.11.tar.gz#sha256=e475d9817d12fa771dbccc80f47758b742fc67c25261dc8ca0c0dc898c2a5190 (from https://pypi.org/simple/checkm-genome/), version: 1.0.11
    Found link https://files.pythonhosted.org/packages/44/cb/d6017ffa33025403c1daba046223ee3d84ea5492e99107610b970219c73c/checkm-genome-1.0.12.tar.gz#sha256=21ff9694b2c1055cb9cfa7ebaa108d9e22389090de1f0d32b60f832c058435ae (from https://pypi.org/simple/checkm-genome/), version: 1.0.12
    Found link https://files.pythonhosted.org/packages/db/2f/fef9adff4fd6fd52431d307a3c1095e80076a67766e6f9bba4deb573f269/checkm-genome-1.0.13.tar.gz#sha256=ffb7e4966c0fac07c7e6e7db6f6eb5b48587fa83987f8a68efbaff2afb7da82e (from https://pypi.org/simple/checkm-genome/), version: 1.0.13
    Found link https://files.pythonhosted.org/packages/36/1c/2bb5b99f1757e98d5d416cf8dcf72dc4ab4869406660967fd348e8c6b708/checkm-genome-1.0.15.tar.gz#sha256=b442fda2b558e3300f3512a1da903bbc5e4e6acd1a788da81e2d263c41f24be1 (from https://pypi.org/simple/checkm-genome/), version: 1.0.15
    Found link https://files.pythonhosted.org/packages/4a/15/84fc69c6dbab4d3ca48e7a83951d74948d6eb7a6ef46dd221d16dd80927d/checkm-genome-1.0.16.tar.gz#sha256=df6ab9d048326030342c498f22641d864d274b2daab1ef766d2efd1f4fc7f501 (from https://pypi.org/simple/checkm-genome/), version: 1.0.16
    Found link https://files.pythonhosted.org/packages/9d/16/4bc442eeae8f320730360d75fc1f8a83ced15181efdd36611184293da840/checkm-genome-1.0.17.tar.gz#sha256=b322e0f1a88dd27df3eba3ac9619aec5c5c498c4539cb02a700d353ade96dfe3 (from https://pypi.org/simple/checkm-genome/), version: 1.0.17
    Found link https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7 (from https://pypi.org/simple/checkm-genome/), version: 1.0.18
  Using version 1.0.18 (newest of versions: 1.0.18)
  Created temporary directory: /tmp/pip-unpack-_bs9jl67
  Downloading https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz (128kB)
  Downloading from URL https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7 (from https://pypi.org/simple/checkm-genome/)
  Added checkm-genome==1.0.18 from https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7 to build tracker '/tmp/pip-req-tracker-qszjqjj3'
  Running setup.py (path:/tmp/pip-wheel-ejfdc2ib/checkm-genome/setup.py) egg_info for package checkm-genome
    Running command python setup.py egg_info
    running egg_info
    creating pip-egg-info/checkm_genome.egg-info
    writing pip-egg-info/checkm_genome.egg-info/PKG-INFO
    writing dependency_links to pip-egg-info/checkm_genome.egg-info/dependency_links.txt
    writing requirements to pip-egg-info/checkm_genome.egg-info/requires.txt
    writing top-level names to pip-egg-info/checkm_genome.egg-info/top_level.txt
    writing manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt'
    reading manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt'
    reading manifest template 'MANIFEST.in'
    warning: no files found matching '*.txt' under directory 'docs'
    writing manifest file 'pip-egg-info/checkm_genome.egg-info/SOURCES.txt'
  Source in /tmp/pip-wheel-ejfdc2ib/checkm-genome has version 1.0.18, which satisfies requirement checkm-genome==1.0.18 from https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7
  Removed checkm-genome==1.0.18 from https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz#sha256=0dcf31eab5e340a0fff37d7a5091d46d9269b0708db8f789adcd7cbd2a09a2b7 from build tracker '/tmp/pip-req-tracker-qszjqjj3'
Building wheels for collected packages: checkm-genome
  Created temporary directory: /tmp/pip-wheel-aq5ikgta
  Running setup.py bdist_wheel for checkm-genome: started
  Destination directory: /tmp/pip-wheel-aq5ikgta
  Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-ejfdc2ib/checkm-genome/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-aq5ikgta
  running bdist_wheel
  running build
  running build_py
  creating build
  creating build/lib
  creating build/lib/checkm
  copying checkm/checkmData.py -> build/lib/checkm
  copying checkm/binUnion.py -> build/lib/checkm
  copying checkm/treeParser.py -> build/lib/checkm
  copying checkm/logger.py -> build/lib/checkm
  copying checkm/common.py -> build/lib/checkm
  copying checkm/prettytable.py -> build/lib/checkm
  copying checkm/merger.py -> build/lib/checkm
  copying checkm/markerSets.py -> build/lib/checkm
  copying checkm/PCA.py -> build/lib/checkm
  copying checkm/hmmerAligner.py -> build/lib/checkm
  copying checkm/genomicSignatures.py -> build/lib/checkm
  copying checkm/binComparer.py -> build/lib/checkm
  copying checkm/profile.py -> build/lib/checkm
  copying checkm/prodigal.py -> build/lib/checkm
  copying checkm/coverageWindows.py -> build/lib/checkm
  copying checkm/manifestManager.py -> build/lib/checkm
  copying checkm/hmmerModelParser.py -> build/lib/checkm
  copying checkm/coverage.py -> build/lib/checkm
  copying checkm/pplacer.py -> build/lib/checkm
  copying checkm/uniqueMarkers.py -> build/lib/checkm
  copying checkm/resultsParser.py -> build/lib/checkm
  copying checkm/ssuFinder.py -> build/lib/checkm
  copying checkm/unbinned.py -> build/lib/checkm
  copying checkm/markerGeneFinder.py -> build/lib/checkm
  copying checkm/hmmer.py -> build/lib/checkm
  copying checkm/fileEntity.py -> build/lib/checkm
  copying checkm/__init__.py -> build/lib/checkm
  copying checkm/customHelpFormatter.py -> build/lib/checkm
  copying checkm/main.py -> build/lib/checkm
  copying checkm/binTools.py -> build/lib/checkm
  copying checkm/defaultValues.py -> build/lib/checkm
  copying checkm/taxonParser.py -> build/lib/checkm
  copying checkm/binStatistics.py -> build/lib/checkm
  copying checkm/timeKeeper.py -> build/lib/checkm
  copying checkm/aminoAcidIdentity.py -> build/lib/checkm
  creating build/lib/checkm/plot
  copying checkm/plot/binQAPlot.py -> build/lib/checkm/plot
  copying checkm/plot/distributionPlots.py -> build/lib/checkm/plot
  copying checkm/plot/codingDensityPlots.py -> build/lib/checkm/plot
  copying checkm/plot/nxPlot.py -> build/lib/checkm/plot
  copying checkm/plot/markerGenePosPlot.py -> build/lib/checkm/plot
  copying checkm/plot/lengthHistogram.py -> build/lib/checkm/plot
  copying checkm/plot/tetraDistPlots.py -> build/lib/checkm/plot
  copying checkm/plot/gcPlots.py -> build/lib/checkm/plot
  copying checkm/plot/parallelCoordPlot.py -> build/lib/checkm/plot
  copying checkm/plot/gcBiasPlots.py -> build/lib/checkm/plot
  copying checkm/plot/cumulativeLengthPlot.py -> build/lib/checkm/plot
  copying checkm/plot/pcaPlot.py -> build/lib/checkm/plot
  copying checkm/plot/AbstractPlot.py -> build/lib/checkm/plot
  copying checkm/plot/__init__.py -> build/lib/checkm/plot
  creating build/lib/checkm/test
  copying checkm/test/test_binStatistics.py -> build/lib/checkm/test
  copying checkm/test/test_aminoAcidIdentity.py -> build/lib/checkm/test
  copying checkm/test/test_seqUtils.py -> build/lib/checkm/test
  copying checkm/test/test_taxonomyUtils.py -> build/lib/checkm/test
  copying checkm/test/test_ecoli.py -> build/lib/checkm/test
  copying checkm/test/test_markerSets.py -> build/lib/checkm/test
  copying checkm/test/test_genomicSignatures.py -> build/lib/checkm/test
  copying checkm/test/__init__.py -> build/lib/checkm/test
  creating build/lib/checkm/util
  copying checkm/util/seqUtils.py -> build/lib/checkm/util
  copying checkm/util/taxonomyUtils.py -> build/lib/checkm/util
  copying checkm/util/pfam.py -> build/lib/checkm/util
  copying checkm/util/__init__.py -> build/lib/checkm/util
  copying checkm/util/img.py -> build/lib/checkm/util
  copying checkm/VERSION -> build/lib/checkm
  copying checkm/DATA_CONFIG -> build/lib/checkm
  running build_scripts
  creating build/scripts-3.4
  copying and adjusting bin/checkm -> build/scripts-3.4
  changing mode of build/scripts-3.4/checkm from 644 to 755
  installing to build/bdist.linux-armv7l/wheel
  running install
  running install_lib
  creating build/bdist.linux-armv7l
  creating build/bdist.linux-armv7l/wheel
  creating build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/checkmData.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/binUnion.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/treeParser.py -> build/bdist.linux-armv7l/wheel/checkm
  creating build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/util/seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/util/taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/util/pfam.py -> build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/util/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/util/img.py -> build/bdist.linux-armv7l/wheel/checkm/util
  copying build/lib/checkm/logger.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/VERSION -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/common.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/prettytable.py -> build/bdist.linux-armv7l/wheel/checkm
  creating build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_ecoli.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_markerSets.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/test_genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/test/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/test
  copying build/lib/checkm/merger.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/markerSets.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/PCA.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/hmmerAligner.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/binComparer.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/profile.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/prodigal.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/coverageWindows.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/manifestManager.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/hmmerModelParser.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/coverage.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/pplacer.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/uniqueMarkers.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/resultsParser.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/ssuFinder.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/unbinned.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/markerGeneFinder.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/hmmer.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/fileEntity.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/__init__.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/customHelpFormatter.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/main.py -> build/bdist.linux-armv7l/wheel/checkm
  creating build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/binQAPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/distributionPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/codingDensityPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/nxPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/markerGenePosPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/lengthHistogram.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/tetraDistPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/gcPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/parallelCoordPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/gcBiasPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/cumulativeLengthPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/pcaPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/AbstractPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/plot/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/plot
  copying build/lib/checkm/binTools.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/DATA_CONFIG -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/defaultValues.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/taxonParser.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/timeKeeper.py -> build/bdist.linux-armv7l/wheel/checkm
  copying build/lib/checkm/aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm
  running install_egg_info
  running egg_info
  writing requirements to checkm_genome.egg-info/requires.txt
  writing top-level names to checkm_genome.egg-info/top_level.txt
  writing dependency_links to checkm_genome.egg-info/dependency_links.txt
  writing checkm_genome.egg-info/PKG-INFO
  reading manifest file 'checkm_genome.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching '*.txt' under directory 'docs'
  writing manifest file 'checkm_genome.egg-info/SOURCES.txt'
  Copying checkm_genome.egg-info to build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18-py3.4.egg-info
  running install_scripts
  creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18.data
  creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18.data/scripts
  copying build/scripts-3.4/checkm -> build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18.data/scripts
  changing mode of build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18.data/scripts/checkm to 755
  adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
  creating build/bdist.linux-armv7l/wheel/checkm_genome-1.0.18.dist-info/WHEEL
  creating '/tmp/pip-wheel-aq5ikgta/checkm_genome-1.0.18-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
  adding 'checkm/DATA_CONFIG'
  adding 'checkm/PCA.py'
  adding 'checkm/VERSION'
  adding 'checkm/__init__.py'
  adding 'checkm/aminoAcidIdentity.py'
  adding 'checkm/binComparer.py'
  adding 'checkm/binStatistics.py'
  adding 'checkm/binTools.py'
  adding 'checkm/binUnion.py'
  adding 'checkm/checkmData.py'
  adding 'checkm/common.py'
  adding 'checkm/coverage.py'
  adding 'checkm/coverageWindows.py'
  adding 'checkm/customHelpFormatter.py'
  adding 'checkm/defaultValues.py'
  adding 'checkm/fileEntity.py'
  adding 'checkm/genomicSignatures.py'
  adding 'checkm/hmmer.py'
  adding 'checkm/hmmerAligner.py'
  adding 'checkm/hmmerModelParser.py'
  adding 'checkm/logger.py'
  adding 'checkm/main.py'
  adding 'checkm/manifestManager.py'
  adding 'checkm/markerGeneFinder.py'
  adding 'checkm/markerSets.py'
  adding 'checkm/merger.py'
  adding 'checkm/pplacer.py'
  adding 'checkm/prettytable.py'
  adding 'checkm/prodigal.py'
  adding 'checkm/profile.py'
  adding 'checkm/resultsParser.py'
  adding 'checkm/ssuFinder.py'
  adding 'checkm/taxonParser.py'
  adding 'checkm/timeKeeper.py'
  adding 'checkm/treeParser.py'
  adding 'checkm/unbinned.py'
  adding 'checkm/uniqueMarkers.py'
  adding 'checkm/plot/AbstractPlot.py'
  adding 'checkm/plot/__init__.py'
  adding 'checkm/plot/binQAPlot.py'
  adding 'checkm/plot/codingDensityPlots.py'
  adding 'checkm/plot/cumulativeLengthPlot.py'
  adding 'checkm/plot/distributionPlots.py'
  adding 'checkm/plot/gcBiasPlots.py'
  adding 'checkm/plot/gcPlots.py'
  adding 'checkm/plot/lengthHistogram.py'
  adding 'checkm/plot/markerGenePosPlot.py'
  adding 'checkm/plot/nxPlot.py'
  adding 'checkm/plot/parallelCoordPlot.py'
  adding 'checkm/plot/pcaPlot.py'
  adding 'checkm/plot/tetraDistPlots.py'
  adding 'checkm/test/__init__.py'
  adding 'checkm/test/test_aminoAcidIdentity.py'
  adding 'checkm/test/test_binStatistics.py'
  adding 'checkm/test/test_ecoli.py'
  adding 'checkm/test/test_genomicSignatures.py'
  adding 'checkm/test/test_markerSets.py'
  adding 'checkm/test/test_seqUtils.py'
  adding 'checkm/test/test_taxonomyUtils.py'
  adding 'checkm/util/__init__.py'
  adding 'checkm/util/img.py'
  adding 'checkm/util/pfam.py'
  adding 'checkm/util/seqUtils.py'
  adding 'checkm/util/taxonomyUtils.py'
  adding 'checkm_genome-1.0.18.data/scripts/checkm'
  adding 'checkm_genome-1.0.18.dist-info/LICENSE'
  adding 'checkm_genome-1.0.18.dist-info/METADATA'
  adding 'checkm_genome-1.0.18.dist-info/WHEEL'
  adding 'checkm_genome-1.0.18.dist-info/top_level.txt'
  adding 'checkm_genome-1.0.18.dist-info/RECORD'
  removing build/bdist.linux-armv7l/wheel
  Running setup.py bdist_wheel for checkm-genome: finished with status 'done'
  Stored in directory: /tmp/tmp3dgk7iho
Successfully built checkm-genome
Cleaning up...
  Removing source in /tmp/pip-wheel-ejfdc2ib/checkm-genome
Removed build tracker '/tmp/pip-req-tracker-qszjqjj3'