Created temporary directory: /tmp/pip-ephem-wheel-cache-mv2ktsu2 Created temporary directory: /tmp/pip-req-tracker-_fzjo7pp Created requirements tracker '/tmp/pip-req-tracker-_fzjo7pp' Created temporary directory: /tmp/pip-wheel-etesd3e7 Collecting nnunet==0.4 1 location(s) to search for versions of nnunet: * https://pypi.org/simple/nnunet/ Getting page https://pypi.org/simple/nnunet/ Analyzing links from page https://pypi.org/simple/nnunet/ Found link https://files.pythonhosted.org/packages/98/15/8fdec75d087aaa02d6d38330444f2d69bd1de2a809ad372fdeb2bd784571/nnunet-0.1-py3-none-any.whl#sha256=d55bb9b93a201c459b0dcbb12a52e4b1d4fc32370dcd53b35d000173c1483ef7 (from https://pypi.org/simple/nnunet/), version: 0.1 Found link https://files.pythonhosted.org/packages/33/ef/6fc6c45e43d1a51ebb9ebc08e69f31690e3557d5836cfefbcb60767d0cfa/nnunet-0.1.tar.gz#sha256=ec1f33d31aada106589128c2974e5d461d94926a4afca4eb431917277a33aa13 (from https://pypi.org/simple/nnunet/), version: 0.1 Found link https://files.pythonhosted.org/packages/e7/b2/78f1d207c7558b0d07a8694102038ce46136a24bb7c92b978d1b44c7f3e8/nnunet-0.2.tar.gz#sha256=2d3c199d5e13180a599b7bd19c73c45fcb8988f7c11ac67bb35f8c22b8145ddf (from https://pypi.org/simple/nnunet/), version: 0.2 Found link https://files.pythonhosted.org/packages/f1/82/a9d49663354d4dd648ae3ed18d1b76fb4eb2371e652c3f22dbf4e891e7fa/nnunet-0.3.tar.gz#sha256=18cc129414ecf98c18e045dae81f099437e7376b270ef6f101a361526b167141 (from https://pypi.org/simple/nnunet/), version: 0.3 Found link https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz#sha256=094ac5416de7f8f39f9a96b00c3aa648e664d114841b3c3b35f6f0857163a993 (from https://pypi.org/simple/nnunet/), version: 0.4 Using version 0.4 (newest of versions: 0.4) Created temporary directory: /tmp/pip-unpack-jx7ykcp7 Downloading https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz (89kB) Downloading from URL https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz#sha256=094ac5416de7f8f39f9a96b00c3aa648e664d114841b3c3b35f6f0857163a993 (from https://pypi.org/simple/nnunet/) Added nnunet==0.4 from https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz#sha256=094ac5416de7f8f39f9a96b00c3aa648e664d114841b3c3b35f6f0857163a993 to build tracker '/tmp/pip-req-tracker-_fzjo7pp' Running setup.py (path:/tmp/pip-wheel-etesd3e7/nnunet/setup.py) egg_info for package nnunet Running command python setup.py egg_info running egg_info creating pip-egg-info/nnunet.egg-info writing top-level names to pip-egg-info/nnunet.egg-info/top_level.txt writing pip-egg-info/nnunet.egg-info/PKG-INFO writing dependency_links to pip-egg-info/nnunet.egg-info/dependency_links.txt writing requirements to pip-egg-info/nnunet.egg-info/requires.txt writing manifest file 'pip-egg-info/nnunet.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/nnunet.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/nnunet.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-etesd3e7/nnunet has version 0.4, which satisfies requirement nnunet==0.4 from https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz#sha256=094ac5416de7f8f39f9a96b00c3aa648e664d114841b3c3b35f6f0857163a993 Removed nnunet==0.4 from https://files.pythonhosted.org/packages/db/2c/bb5a613dd3313bf7bce5ab89e9e895f60c6b84fe7728a4955a5c0d89216d/nnunet-0.4.tar.gz#sha256=094ac5416de7f8f39f9a96b00c3aa648e664d114841b3c3b35f6f0857163a993 from build tracker '/tmp/pip-req-tracker-_fzjo7pp' Building wheels for collected packages: nnunet Created temporary directory: /tmp/pip-wheel-ny2hpj2c Running setup.py bdist_wheel for nnunet: started Destination directory: /tmp/pip-wheel-ny2hpj2c Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-etesd3e7/nnunet/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-ny2hpj2c running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/nnunet copying nnunet/paths.py -> build/lib/nnunet copying nnunet/__init__.py -> build/lib/nnunet creating build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/__init__.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/BraTS_2019.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/LiverTumorSegmentationChallenge.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/Promise2012.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/ISBI_MSLesionSegmentationChallenge.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/AutomaticCardiacDetectionChallenge.py -> build/lib/nnunet/dataset_conversion copying nnunet/dataset_conversion/BeyondCranialVaultAbdominalOrganSegmentation.py -> build/lib/nnunet/dataset_conversion creating build/lib/nnunet/evaluation copying nnunet/evaluation/evaluator.py -> build/lib/nnunet/evaluation copying nnunet/evaluation/collect_results_files.py -> build/lib/nnunet/evaluation copying nnunet/evaluation/__init__.py -> build/lib/nnunet/evaluation copying nnunet/evaluation/metrics.py -> build/lib/nnunet/evaluation copying nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py -> build/lib/nnunet/evaluation copying nnunet/evaluation/add_mean_dice_to_json.py -> build/lib/nnunet/evaluation creating build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/summarize_results_in_one_json.py -> build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/summarize_results_with_plans.py -> build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py -> build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/__init__.py -> build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/figure_out_what_to_submit.py -> build/lib/nnunet/evaluation/model_selection copying nnunet/evaluation/model_selection/ensemble.py -> build/lib/nnunet/evaluation/model_selection creating build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/common_utils.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/__init__.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/summarize_plans.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/find_classes_in_slice.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/DatasetAnalyzer.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/configuration.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/plan_and_preprocess_task.py -> build/lib/nnunet/experiment_planning copying nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py -> build/lib/nnunet/experiment_planning creating build/lib/nnunet/inference copying nnunet/inference/__init__.py -> build/lib/nnunet/inference copying nnunet/inference/ensemble_predictions.py -> build/lib/nnunet/inference copying nnunet/inference/predict_simple.py -> build/lib/nnunet/inference copying nnunet/inference/predict.py -> build/lib/nnunet/inference copying nnunet/inference/segmentation_export.py -> build/lib/nnunet/inference creating build/lib/nnunet/network_architecture copying nnunet/network_architecture/__init__.py -> build/lib/nnunet/network_architecture copying nnunet/network_architecture/generic_UNet.py -> build/lib/nnunet/network_architecture copying nnunet/network_architecture/neural_network.py -> build/lib/nnunet/network_architecture copying nnunet/network_architecture/initialization.py -> build/lib/nnunet/network_architecture creating build/lib/nnunet/preprocessing copying nnunet/preprocessing/__init__.py -> build/lib/nnunet/preprocessing copying nnunet/preprocessing/preprocessing.py -> build/lib/nnunet/preprocessing copying nnunet/preprocessing/cropping.py -> build/lib/nnunet/preprocessing creating build/lib/nnunet/run copying nnunet/run/__init__.py -> build/lib/nnunet/run copying nnunet/run/default_configuration.py -> build/lib/nnunet/run copying nnunet/run/run_training.py -> build/lib/nnunet/run creating build/lib/nnunet/training copying nnunet/training/__init__.py -> build/lib/nnunet/training copying nnunet/training/model_restore.py -> build/lib/nnunet/training creating build/lib/nnunet/training/cascade_stuff copying nnunet/training/cascade_stuff/__init__.py -> build/lib/nnunet/training/cascade_stuff copying nnunet/training/cascade_stuff/predict_next_stage.py -> build/lib/nnunet/training/cascade_stuff creating build/lib/nnunet/training/data_augmentation copying nnunet/training/data_augmentation/pyramid_augmentations.py -> build/lib/nnunet/training/data_augmentation copying nnunet/training/data_augmentation/__init__.py -> build/lib/nnunet/training/data_augmentation copying nnunet/training/data_augmentation/default_data_augmentation.py -> build/lib/nnunet/training/data_augmentation copying nnunet/training/data_augmentation/custom_transforms.py -> build/lib/nnunet/training/data_augmentation creating build/lib/nnunet/training/dataloading copying nnunet/training/dataloading/__init__.py -> build/lib/nnunet/training/dataloading copying nnunet/training/dataloading/dataset_loading.py -> build/lib/nnunet/training/dataloading creating build/lib/nnunet/training/loss_functions copying nnunet/training/loss_functions/dice_loss.py -> build/lib/nnunet/training/loss_functions copying nnunet/training/loss_functions/__init__.py -> build/lib/nnunet/training/loss_functions copying nnunet/training/loss_functions/ND_Crossentropy.py -> build/lib/nnunet/training/loss_functions copying nnunet/training/loss_functions/TopK_loss.py -> build/lib/nnunet/training/loss_functions copying nnunet/training/loss_functions/GDL.py -> build/lib/nnunet/training/loss_functions creating build/lib/nnunet/training/network_training copying nnunet/training/network_training/__init__.py -> build/lib/nnunet/training/network_training copying nnunet/training/network_training/network_trainer.py -> build/lib/nnunet/training/network_training copying nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py -> build/lib/nnunet/training/network_training copying nnunet/training/network_training/nnUNetTrainer.py -> build/lib/nnunet/training/network_training creating build/lib/nnunet/training/network_training/nnUNet_variants copying nnunet/training/network_training/nnUNet_variants/__init__.py -> build/lib/nnunet/training/network_training/nnUNet_variants copying nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py -> build/lib/nnunet/training/network_training/nnUNet_variants copying nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py -> build/lib/nnunet/training/network_training/nnUNet_variants creating build/lib/nnunet/utilities copying nnunet/utilities/__init__.py -> build/lib/nnunet/utilities copying nnunet/utilities/tensor_utilities.py -> build/lib/nnunet/utilities copying nnunet/utilities/nd_softmax.py -> build/lib/nnunet/utilities copying nnunet/utilities/one_hot_encoding.py -> build/lib/nnunet/utilities copying nnunet/utilities/online_evaluation_metrics.py -> build/lib/nnunet/utilities installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/nnunet creating build/bdist.linux-armv7l/wheel/nnunet/preprocessing copying build/lib/nnunet/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing copying build/lib/nnunet/preprocessing/preprocessing.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing copying build/lib/nnunet/preprocessing/cropping.py -> build/bdist.linux-armv7l/wheel/nnunet/preprocessing copying build/lib/nnunet/paths.py -> build/bdist.linux-armv7l/wheel/nnunet copying build/lib/nnunet/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet creating build/bdist.linux-armv7l/wheel/nnunet/run copying build/lib/nnunet/run/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/run copying build/lib/nnunet/run/default_configuration.py -> build/bdist.linux-armv7l/wheel/nnunet/run copying build/lib/nnunet/run/run_training.py -> build/bdist.linux-armv7l/wheel/nnunet/run creating build/bdist.linux-armv7l/wheel/nnunet/network_architecture copying build/lib/nnunet/network_architecture/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture copying build/lib/nnunet/network_architecture/generic_UNet.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture copying build/lib/nnunet/network_architecture/neural_network.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture copying build/lib/nnunet/network_architecture/initialization.py -> build/bdist.linux-armv7l/wheel/nnunet/network_architecture creating build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/common_utils.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/summarize_plans.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/find_classes_in_slice.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/DatasetAnalyzer.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/configuration.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/plan_and_preprocess_task.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning copying build/lib/nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py -> build/bdist.linux-armv7l/wheel/nnunet/experiment_planning creating build/bdist.linux-armv7l/wheel/nnunet/utilities copying build/lib/nnunet/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities copying build/lib/nnunet/utilities/tensor_utilities.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities copying build/lib/nnunet/utilities/nd_softmax.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities copying build/lib/nnunet/utilities/one_hot_encoding.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities copying build/lib/nnunet/utilities/online_evaluation_metrics.py -> build/bdist.linux-armv7l/wheel/nnunet/utilities creating build/bdist.linux-armv7l/wheel/nnunet/inference copying build/lib/nnunet/inference/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/inference copying build/lib/nnunet/inference/ensemble_predictions.py -> build/bdist.linux-armv7l/wheel/nnunet/inference copying build/lib/nnunet/inference/predict_simple.py -> build/bdist.linux-armv7l/wheel/nnunet/inference copying build/lib/nnunet/inference/predict.py -> build/bdist.linux-armv7l/wheel/nnunet/inference copying build/lib/nnunet/inference/segmentation_export.py -> build/bdist.linux-armv7l/wheel/nnunet/inference creating build/bdist.linux-armv7l/wheel/nnunet/evaluation copying build/lib/nnunet/evaluation/evaluator.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation copying build/lib/nnunet/evaluation/collect_results_files.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation creating build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/summarize_results_in_one_json.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/summarize_results_with_plans.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/figure_out_what_to_submit.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/model_selection/ensemble.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation/model_selection copying build/lib/nnunet/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation copying build/lib/nnunet/evaluation/metrics.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation copying build/lib/nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation copying build/lib/nnunet/evaluation/add_mean_dice_to_json.py -> build/bdist.linux-armv7l/wheel/nnunet/evaluation creating build/bdist.linux-armv7l/wheel/nnunet/training copying build/lib/nnunet/training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training creating build/bdist.linux-armv7l/wheel/nnunet/training/dataloading copying build/lib/nnunet/training/dataloading/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/dataloading copying build/lib/nnunet/training/dataloading/dataset_loading.py -> build/bdist.linux-armv7l/wheel/nnunet/training/dataloading copying build/lib/nnunet/training/model_restore.py -> build/bdist.linux-armv7l/wheel/nnunet/training creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training copying build/lib/nnunet/training/network_training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training copying build/lib/nnunet/training/network_training/network_trainer.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training copying build/lib/nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training creating build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants copying build/lib/nnunet/training/network_training/nnUNet_variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants copying build/lib/nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants copying build/lib/nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training/nnUNet_variants copying build/lib/nnunet/training/network_training/nnUNetTrainer.py -> build/bdist.linux-armv7l/wheel/nnunet/training/network_training creating build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation copying build/lib/nnunet/training/data_augmentation/pyramid_augmentations.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation copying build/lib/nnunet/training/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation copying build/lib/nnunet/training/data_augmentation/default_data_augmentation.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation copying build/lib/nnunet/training/data_augmentation/custom_transforms.py -> build/bdist.linux-armv7l/wheel/nnunet/training/data_augmentation creating build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions copying build/lib/nnunet/training/loss_functions/dice_loss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions copying build/lib/nnunet/training/loss_functions/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions copying build/lib/nnunet/training/loss_functions/ND_Crossentropy.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions copying build/lib/nnunet/training/loss_functions/TopK_loss.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions copying build/lib/nnunet/training/loss_functions/GDL.py -> build/bdist.linux-armv7l/wheel/nnunet/training/loss_functions creating build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff copying build/lib/nnunet/training/cascade_stuff/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff copying build/lib/nnunet/training/cascade_stuff/predict_next_stage.py -> build/bdist.linux-armv7l/wheel/nnunet/training/cascade_stuff creating build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/__init__.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/BraTS_2019.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/LiverTumorSegmentationChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/Promise2012.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/ISBI_MSLesionSegmentationChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/AutomaticCardiacDetectionChallenge.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion copying build/lib/nnunet/dataset_conversion/BeyondCranialVaultAbdominalOrganSegmentation.py -> build/bdist.linux-armv7l/wheel/nnunet/dataset_conversion running install_egg_info running egg_info writing nnunet.egg-info/PKG-INFO writing requirements to nnunet.egg-info/requires.txt writing top-level names to nnunet.egg-info/top_level.txt writing dependency_links to nnunet.egg-info/dependency_links.txt reading manifest file 'nnunet.egg-info/SOURCES.txt' writing manifest file 'nnunet.egg-info/SOURCES.txt' Copying nnunet.egg-info to build/bdist.linux-armv7l/wheel/nnunet-0.4-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/nnunet-0.4.dist-info/WHEEL creating '/tmp/pip-wheel-ny2hpj2c/nnunet-0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'nnunet/__init__.py' adding 'nnunet/paths.py' adding 'nnunet/dataset_conversion/AutomaticCardiacDetectionChallenge.py' adding 'nnunet/dataset_conversion/BeyondCranialVaultAbdominalOrganSegmentation.py' adding 'nnunet/dataset_conversion/BraTS_2019.py' adding 'nnunet/dataset_conversion/ISBI_MSLesionSegmentationChallenge.py' adding 'nnunet/dataset_conversion/LiverTumorSegmentationChallenge.py' adding 'nnunet/dataset_conversion/Promise2012.py' adding 'nnunet/dataset_conversion/__init__.py' adding 'nnunet/evaluation/__init__.py' adding 'nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py' adding 'nnunet/evaluation/add_mean_dice_to_json.py' adding 'nnunet/evaluation/collect_results_files.py' adding 'nnunet/evaluation/evaluator.py' adding 'nnunet/evaluation/metrics.py' adding 'nnunet/evaluation/model_selection/__init__.py' adding 'nnunet/evaluation/model_selection/collect_all_fold0_results_and_summarize_in_one_csv.py' adding 'nnunet/evaluation/model_selection/ensemble.py' adding 'nnunet/evaluation/model_selection/figure_out_what_to_submit.py' adding 'nnunet/evaluation/model_selection/summarize_results_in_one_json.py' adding 'nnunet/evaluation/model_selection/summarize_results_with_plans.py' adding 'nnunet/experiment_planning/DatasetAnalyzer.py' adding 'nnunet/experiment_planning/__init__.py' adding 'nnunet/experiment_planning/common_utils.py' adding 'nnunet/experiment_planning/configuration.py' adding 'nnunet/experiment_planning/experiment_planner_baseline_2DUNet.py' adding 'nnunet/experiment_planning/experiment_planner_baseline_3DUNet.py' adding 'nnunet/experiment_planning/find_classes_in_slice.py' adding 'nnunet/experiment_planning/plan_and_preprocess_task.py' adding 'nnunet/experiment_planning/summarize_plans.py' adding 'nnunet/inference/__init__.py' adding 'nnunet/inference/ensemble_predictions.py' adding 'nnunet/inference/predict.py' adding 'nnunet/inference/predict_simple.py' adding 'nnunet/inference/segmentation_export.py' adding 'nnunet/network_architecture/__init__.py' adding 'nnunet/network_architecture/generic_UNet.py' adding 'nnunet/network_architecture/initialization.py' adding 'nnunet/network_architecture/neural_network.py' adding 'nnunet/preprocessing/__init__.py' adding 'nnunet/preprocessing/cropping.py' adding 'nnunet/preprocessing/preprocessing.py' adding 'nnunet/run/__init__.py' adding 'nnunet/run/default_configuration.py' adding 'nnunet/run/run_training.py' adding 'nnunet/training/__init__.py' adding 'nnunet/training/model_restore.py' adding 'nnunet/training/cascade_stuff/__init__.py' adding 'nnunet/training/cascade_stuff/predict_next_stage.py' adding 'nnunet/training/data_augmentation/__init__.py' adding 'nnunet/training/data_augmentation/custom_transforms.py' adding 'nnunet/training/data_augmentation/default_data_augmentation.py' adding 'nnunet/training/data_augmentation/pyramid_augmentations.py' adding 'nnunet/training/dataloading/__init__.py' adding 'nnunet/training/dataloading/dataset_loading.py' adding 'nnunet/training/loss_functions/GDL.py' adding 'nnunet/training/loss_functions/ND_Crossentropy.py' adding 'nnunet/training/loss_functions/TopK_loss.py' adding 'nnunet/training/loss_functions/__init__.py' adding 'nnunet/training/loss_functions/dice_loss.py' adding 'nnunet/training/network_training/__init__.py' adding 'nnunet/training/network_training/network_trainer.py' adding 'nnunet/training/network_training/nnUNetTrainer.py' adding 'nnunet/training/network_training/nnUNetTrainerCascadeFullRes.py' adding 'nnunet/training/network_training/nnUNet_variants/__init__.py' adding 'nnunet/training/network_training/nnUNet_variants/nnUNetTrainerCE.py' adding 'nnunet/training/network_training/nnUNet_variants/nnUNetTrainerNoDA.py' adding 'nnunet/utilities/__init__.py' adding 'nnunet/utilities/nd_softmax.py' adding 'nnunet/utilities/one_hot_encoding.py' adding 'nnunet/utilities/online_evaluation_metrics.py' adding 'nnunet/utilities/tensor_utilities.py' adding 'nnunet-0.4.dist-info/METADATA' adding 'nnunet-0.4.dist-info/WHEEL' adding 'nnunet-0.4.dist-info/top_level.txt' adding 'nnunet-0.4.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for nnunet: finished with status 'done' Stored in directory: /tmp/tmpr33ik3lk Successfully built nnunet Cleaning up... Removing source in /tmp/pip-wheel-etesd3e7/nnunet Removed build tracker '/tmp/pip-req-tracker-_fzjo7pp'