2019-09-06T13:43:20 Created temporary directory: /tmp/pip-ephem-wheel-cache-tf_w6u_6 2019-09-06T13:43:20 Created temporary directory: /tmp/pip-req-tracker-_n_9kz3o 2019-09-06T13:43:20 Created requirements tracker '/tmp/pip-req-tracker-_n_9kz3o' 2019-09-06T13:43:20 Created temporary directory: /tmp/pip-wheel-0u3wmgdt 2019-09-06T13:43:20 Collecting ImmuneDB==0.29.4 2019-09-06T13:43:20 1 location(s) to search for versions of ImmuneDB: 2019-09-06T13:43:20 * https://pypi.org/simple/immunedb/ 2019-09-06T13:43:20 Getting page https://pypi.org/simple/immunedb/ 2019-09-06T13:43:21 Analyzing links from page https://pypi.org/simple/immunedb/ 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/06/83/505d4ee553eb031c32f8f6d7b707630d9c6f7c49389388c0792fab2b8503/ImmuneDB-0.18.0.tar.gz#sha256=e8e54225deb24e4e2c7dd02bddf3b8649b99772d94259579865e32880de09e31 (from https://pypi.org/simple/immunedb/), version: 0.18.0 2019-09-06T13:43:21 Skipping link https://files.pythonhosted.org/packages/8e/f2/fff249500268da241761000d2a0428d8a8a0b8fc8ee7a80acaf0666951d8/ImmuneDB-0.19.0-py2.7-linux-x86_64.egg#sha256=abe7b9f33ec4e82e3e688c20b22c5cc98eba1897427ee2e3969698207eb3e978 (from https://pypi.org/simple/immunedb/); unsupported archive format: .egg 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/39/4c/c42a3f272f998c9ffe3196875bfb7ffbd65053b2faa29fb194c112264b16/ImmuneDB-0.19.0.tar.gz#sha256=3608138c90b4f73cc732c43adce0c811cfc90d56fca001ab50e46245afb5956f (from https://pypi.org/simple/immunedb/), version: 0.19.0 2019-09-06T13:43:21 Skipping link https://files.pythonhosted.org/packages/4b/b5/2e0ffac807bd87383d881b39be7dd432c7f6e3c856a2092ee7d0fc58e455/ImmuneDB-0.19.1-py2.7-linux-x86_64.egg#sha256=6a086efd6f4fe68b372eec57e22cdff2b6169367d8e3792f86374d30e03f4b93 (from https://pypi.org/simple/immunedb/); unsupported archive format: .egg 2019-09-06T13:43:21 Skipping link https://files.pythonhosted.org/packages/8d/8b/9b351c79d7d6160c5396ac1cc8b750f8443ff139bf0ca6e4ebc6065c0407/ImmuneDB-0.19.2-py2.7-linux-x86_64.egg#sha256=343f7fa368fec72a36fa620698e0ce2882c022addab8b5ccbd0b95b3bb631f6f (from https://pypi.org/simple/immunedb/); unsupported archive format: .egg 2019-09-06T13:43:21 Skipping link https://files.pythonhosted.org/packages/c0/ae/8b8e61571a109063a9c215055bbb395db703d4224dd7c569e9f528a69daa/ImmuneDB-0.20.1-py2.7-linux-x86_64.egg#sha256=4c45b1885d74771195976e6ea02b5f85db4fe60f32325643cdf8947e87673a9e (from https://pypi.org/simple/immunedb/); unsupported archive format: .egg 2019-09-06T13:43:21 Skipping link https://files.pythonhosted.org/packages/b7/13/e239af281a67edc51692ec01ed0669ab22ef4e56e423e2a59a84d44c9b78/ImmuneDB-0.21.0-py2.7-linux-x86_64.egg#sha256=038d102d1f5a9f9090d54aa931fe8c951ce5af57c1a765e0b7378d13c4a3dbdd (from https://pypi.org/simple/immunedb/); unsupported archive format: .egg 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/f2/66/c09e9e88cf7fc52adbd48c6510fa23f4224428bfb8aa762ce0403711833d/ImmuneDB-0.21.0.tar.gz#sha256=a38f37855d30fa241f6e216121933161b5c6e1505a64342a20b2a8feab6aa059 (from https://pypi.org/simple/immunedb/), version: 0.21.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/32/ca/b30afff0cefba00944b0b83ce7824c3a33c27746065994c65019802af866/ImmuneDB-0.22.1.tar.gz#sha256=d272b4e3b81a71f6cef179eded4081a4d8990a106bfb94f252f39ea3ead301c8 (from https://pypi.org/simple/immunedb/), version: 0.22.1 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/08/f5/90d77ee8489a4cd028d7bd8a9d8b4aeb40f86e527c04831987ef49d0f4b1/ImmuneDB-0.23.0.tar.gz#sha256=9635bef656da289523b0f766238ce3e60140aaaae9b1b7bfac4da23d9cdd4206 (from https://pypi.org/simple/immunedb/), version: 0.23.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/55/03/efd5d4505924f6d504a58046cf81a1ba345af76da44d96aad72ddf8accf5/ImmuneDB-0.24.1.tar.gz#sha256=71cf62deae101dab89e848ffedef1010fdf34bc480a2de460b492b8af68c6ff4 (from https://pypi.org/simple/immunedb/), version: 0.24.1 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/75/e1/6804b69476dbb523d2cab5633952615f016d2a220164b3c8319d29089bd6/ImmuneDB-0.25.0.tar.gz#sha256=0383ce42bace67ec179f6a1166513ac467c7b27ca21ccd3ca9ae64e32df441c0 (from https://pypi.org/simple/immunedb/), version: 0.25.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/24/7a/98af9739d693476c6bd5c2c87edd707675445a69ef7a8a99b883aaa465ae/ImmuneDB-0.25.1.tar.gz#sha256=51794a473d3613fccfbe729769a89370119b5fedc2f198c4992bc8c0e490e066 (from https://pypi.org/simple/immunedb/), version: 0.25.1 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/47/89/aeaec0bdef1f2c4f82895d53bb357a19c15fe0c96059c04ad81652f8831c/ImmuneDB-0.26.0.tar.gz#sha256=6eb22e7a083a26265f61f27c94cb335020358ff191f7aa9a1d836a81dc017e5c (from https://pypi.org/simple/immunedb/), version: 0.26.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/7d/98/bc1939b70506fca54570f2b2bf754a5ce0ab752dbb6e83a67b6a4e03cf1d/ImmuneDB-0.27.0.tar.gz#sha256=eb355791e05703f60f8eaf6d55ad31c4d64bebd94b084c7fe1c510dc749706fd (from https://pypi.org/simple/immunedb/), version: 0.27.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/7d/e2/87593aaa7435e43c92d42fb6c2d8d4527504f384db7b4b46d7e5c403eff7/ImmuneDB-0.28.0.tar.gz#sha256=31a128e4b88013ee3069764744733008ba2e5c6cbcb2549c7b8d9f7e53317a85 (from https://pypi.org/simple/immunedb/), version: 0.28.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/62/40/9e6fb1deda88eb91078efbc0ce6e44dc6c900312e667dfae5b02a23a931f/ImmuneDB-0.28.1.tar.gz#sha256=6451d806e8a641ba2ace85d6fe7bd0184fe3a1de64c68eb815f457769f90f001 (from https://pypi.org/simple/immunedb/), version: 0.28.1 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/84/24/db7f1275c7cdfca19d2e158592d0b73eb7756569af460666fd5f839eb253/ImmuneDB-0.28.2.tar.gz#sha256=b10f3cd8340dd79e6edcbe0b7c691658f3275f60ef12c09a532bea8d0d38b26d (from https://pypi.org/simple/immunedb/), version: 0.28.2 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/c2/a7/9583523da7401f8ee11baffd4d24d601c32afe8bb341746f930176de183f/ImmuneDB-0.28.3.tar.gz#sha256=b8982eaaf91348617041d17f5af58990320e022ed3514978466249362930043c (from https://pypi.org/simple/immunedb/), version: 0.28.3 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/33/40/c5ebf8bb55b3218058aee8b4bc18ebfee536db4cd11177f0738891af3e11/ImmuneDB-0.29.0.tar.gz#sha256=cd80160d9be82baa2ee5c6fb310b8ed796855ff8ea45648c83d90a5cbe5775eb (from https://pypi.org/simple/immunedb/), version: 0.29.0 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/f0/20/b240c2f3e40412808e3fef4ed63fca58e2723503b03baa56e5344dc63adb/ImmuneDB-0.29.1.tar.gz#sha256=e6dfaa07c8cdda2548ace1c5c2d7de2ad9e1d7885826ed8fe45f472966ab2470 (from https://pypi.org/simple/immunedb/), version: 0.29.1 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/7a/32/f944a55b94178bf361e0567b7d38e54e89212b2b77dbb5077a10bf6472de/ImmuneDB-0.29.2.tar.gz#sha256=04526d345ea9aa2eb1e272817788a344c370d9c69e74452f15ac0b219bdc4adf (from https://pypi.org/simple/immunedb/), version: 0.29.2 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/0a/8f/d3d1222894872125250ebeb8c8e8a394912ed2d9cea998393f77eaaade2f/ImmuneDB-0.29.3.tar.gz#sha256=968576aa6709f60c88f0edc20ef5ce6ec1e89b96a5796667632d5c6f5ce1c209 (from https://pypi.org/simple/immunedb/), version: 0.29.3 2019-09-06T13:43:21 Found link https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f (from https://pypi.org/simple/immunedb/), version: 0.29.4 2019-09-06T13:43:21 Using version 0.29.4 (newest of versions: 0.29.4) 2019-09-06T13:43:21 Created temporary directory: /tmp/pip-unpack-cpst0865 2019-09-06T13:43:21 Downloading https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz (76kB) 2019-09-06T13:43:21 Downloading from URL https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f (from https://pypi.org/simple/immunedb/) 2019-09-06T13:43:21 Added ImmuneDB==0.29.4 from https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f to build tracker '/tmp/pip-req-tracker-_n_9kz3o' 2019-09-06T13:43:21 Running setup.py (path:/tmp/pip-wheel-0u3wmgdt/ImmuneDB/setup.py) egg_info for package ImmuneDB 2019-09-06T13:43:21 Running command python setup.py egg_info 2019-09-06T13:43:23 running egg_info 2019-09-06T13:43:23 creating pip-egg-info/ImmuneDB.egg-info 2019-09-06T13:43:23 writing dependency_links to pip-egg-info/ImmuneDB.egg-info/dependency_links.txt 2019-09-06T13:43:23 writing requirements to pip-egg-info/ImmuneDB.egg-info/requires.txt 2019-09-06T13:43:23 writing pip-egg-info/ImmuneDB.egg-info/PKG-INFO 2019-09-06T13:43:23 writing top-level names to pip-egg-info/ImmuneDB.egg-info/top_level.txt 2019-09-06T13:43:23 writing manifest file 'pip-egg-info/ImmuneDB.egg-info/SOURCES.txt' 2019-09-06T13:43:24 reading manifest file 'pip-egg-info/ImmuneDB.egg-info/SOURCES.txt' 2019-09-06T13:43:24 reading manifest template 'MANIFEST.in' 2019-09-06T13:43:24 writing manifest file 'pip-egg-info/ImmuneDB.egg-info/SOURCES.txt' 2019-09-06T13:43:24 Source in /tmp/pip-wheel-0u3wmgdt/ImmuneDB has version 0.29.4, which satisfies requirement ImmuneDB==0.29.4 from https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f 2019-09-06T13:43:24 Removed ImmuneDB==0.29.4 from https://files.pythonhosted.org/packages/9c/17/8456fc1fb3ffe152841acfaf1aec374ec699755483e0ffc2d0165714f886/ImmuneDB-0.29.4.tar.gz#sha256=607d7d121805cd61cb518f8f816e62818fa4600a8392476ae104aea34ccb1b2f from build tracker '/tmp/pip-req-tracker-_n_9kz3o' 2019-09-06T13:43:24 Building wheels for collected packages: ImmuneDB 2019-09-06T13:43:24 Created temporary directory: /tmp/pip-wheel-16x_ms2x 2019-09-06T13:43:24 Building wheel for ImmuneDB (setup.py): started 2019-09-06T13:43:24 Destination directory: /tmp/pip-wheel-16x_ms2x 2019-09-06T13:43:24 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-0u3wmgdt/ImmuneDB/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-16x_ms2x 2019-09-06T13:43:26 running bdist_wheel 2019-09-06T13:43:26 running build 2019-09-06T13:43:26 running build_py 2019-09-06T13:43:27 creating build 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb 2019-09-06T13:43:27 copying immunedb/__init__.py -> build/lib.linux-armv7l-3.5/immunedb 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 copying immunedb/aggregation/collapse.py -> build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 copying immunedb/aggregation/clones.py -> build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 copying immunedb/aggregation/sample_stats.py -> build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 copying immunedb/aggregation/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 copying immunedb/aggregation/clone_stats.py -> build/lib.linux-armv7l-3.5/immunedb/aggregation 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/api 2019-09-06T13:43:27 copying immunedb/api/jobs.py -> build/lib.linux-armv7l-3.5/immunedb/api 2019-09-06T13:43:27 copying immunedb/api/queries.py -> build/lib.linux-armv7l-3.5/immunedb/api 2019-09-06T13:43:27 copying immunedb/api/rest_service.py -> build/lib.linux-armv7l-3.5/immunedb/api 2019-09-06T13:43:27 copying immunedb/api/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/api 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/mutations.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/modification_log.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/config.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/baseline.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/modify.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/models.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 copying immunedb/common/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/common 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/tsv_writer.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/writer.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/samples.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/sequences.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/genbank.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/selection.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 copying immunedb/exporting/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/exporting 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/exporting/clones 2019-09-06T13:43:27 copying immunedb/exporting/clones/overlap.py -> build/lib.linux-armv7l-3.5/immunedb/exporting/clones 2019-09-06T13:43:27 copying immunedb/exporting/clones/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/exporting/clones 2019-09-06T13:43:27 copying immunedb/exporting/clones/listing.py -> build/lib.linux-armv7l-3.5/immunedb/exporting/clones 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/metadata.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/identify.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/local_align.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/genes.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/vdj_sequence.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 copying immunedb/identification/anchor.py -> build/lib.linux-armv7l-3.5/immunedb/identification 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/importing 2019-09-06T13:43:27 copying immunedb/importing/clones.py -> build/lib.linux-armv7l-3.5/immunedb/importing 2019-09-06T13:43:27 copying immunedb/importing/alignments.py -> build/lib.linux-armv7l-3.5/immunedb/importing 2019-09-06T13:43:27 copying immunedb/importing/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/importing 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/trees 2019-09-06T13:43:27 copying immunedb/trees/clearcut.py -> build/lib.linux-armv7l-3.5/immunedb/trees 2019-09-06T13:43:27 copying immunedb/trees/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/trees 2019-09-06T13:43:27 creating build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/funcs.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/log.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/concurrent.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/lookups.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/hyper.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/admin.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 copying immunedb/util/__init__.py -> build/lib.linux-armv7l-3.5/immunedb/util 2019-09-06T13:43:27 running build_ext 2019-09-06T13:43:27 building 'dnautils' extension 2019-09-06T13:43:27 creating build/temp.linux-armv7l-3.5 2019-09-06T13:43:27 creating build/temp.linux-armv7l-3.5/lib 2019-09-06T13:43:27 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-6waWnr/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.5m -c lib/dnautils.c -o build/temp.linux-armv7l-3.5/lib/dnautils.o -std=c99 2019-09-06T13:43:28 In file included from /usr/include/python3.5m/Python.h:65:0, 2019-09-06T13:43:28 from lib/dnautils.c:2: 2019-09-06T13:43:28 /usr/include/python3.5m/pytime.h:136:56: warning: 'struct timespec' declared inside parameter list will not be visible outside of this definition or declaration 2019-09-06T13:43:28 PyAPI_FUNC(int) _PyTime_AsTimespec(_PyTime_t t, struct timespec *ts); 2019-09-06T13:43:28 ^~~~~~~~ 2019-09-06T13:43:28 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-6waWnr/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/lib/dnautils.o -o build/lib.linux-armv7l-3.5/dnautils.cpython-35m-arm-linux-gnueabihf.so 2019-09-06T13:43:28 running build_scripts 2019-09-06T13:43:28 creating build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_admin -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_clones -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_clone_import -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_clone_stats -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_clone_pressure -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_clone_trees -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_collapse -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_export -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_local_align -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_identify -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_import -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_metadata -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_modify -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_rest -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_sample_stats -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_sql -> build/scripts-3.5 2019-09-06T13:43:28 copying and adjusting bin/immunedb_genotype -> build/scripts-3.5 2019-09-06T13:43:28 copying bin/run_tigger -> build/scripts-3.5 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_admin from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_clones from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_clone_import from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_clone_stats from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_clone_pressure from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_clone_trees from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_collapse from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_export from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_local_align from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_identify from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_import from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_metadata from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_modify from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_rest from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_sample_stats from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_sql from 644 to 755 2019-09-06T13:43:28 changing mode of build/scripts-3.5/immunedb_genotype from 644 to 755 2019-09-06T13:43:28 installing to build/bdist.linux-armv7l/wheel 2019-09-06T13:43:28 running install 2019-09-06T13:43:28 running install_lib 2019-09-06T13:43:28 creating build/bdist.linux-armv7l 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/dnautils.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel/immunedb 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/tsv_writer.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel/immunedb/exporting/clones 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/clones/overlap.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting/clones 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/clones/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting/clones 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/clones/listing.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting/clones 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/writer.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/samples.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/sequences.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/genbank.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/selection.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/exporting/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/exporting 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel/immunedb/importing 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/importing/clones.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/importing/alignments.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/importing/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/importing 2019-09-06T13:43:28 creating build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/common/mutations.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/common/modification_log.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:28 copying build/lib.linux-armv7l-3.5/immunedb/common/config.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/common/baseline.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/common/modify.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/common/models.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/common/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/common 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/immunedb/trees 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/trees/clearcut.py -> build/bdist.linux-armv7l/wheel/immunedb/trees 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/trees/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/trees 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/immunedb/api 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/api/jobs.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/api/queries.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/api/rest_service.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/api/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/api 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/funcs.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/log.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/concurrent.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/lookups.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/hyper.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/admin.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/util/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/util 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/metadata.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/identify.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/local_align.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/genes.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/vdj_sequence.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/identification/anchor.py -> build/bdist.linux-armv7l/wheel/immunedb/identification 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/aggregation/collapse.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/aggregation/clones.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/aggregation/sample_stats.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/aggregation/__init__.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 copying build/lib.linux-armv7l-3.5/immunedb/aggregation/clone_stats.py -> build/bdist.linux-armv7l/wheel/immunedb/aggregation 2019-09-06T13:43:29 running install_egg_info 2019-09-06T13:43:29 running egg_info 2019-09-06T13:43:29 writing requirements to ImmuneDB.egg-info/requires.txt 2019-09-06T13:43:29 writing dependency_links to ImmuneDB.egg-info/dependency_links.txt 2019-09-06T13:43:29 writing ImmuneDB.egg-info/PKG-INFO 2019-09-06T13:43:29 writing top-level names to ImmuneDB.egg-info/top_level.txt 2019-09-06T13:43:29 reading manifest file 'ImmuneDB.egg-info/SOURCES.txt' 2019-09-06T13:43:29 reading manifest template 'MANIFEST.in' 2019-09-06T13:43:29 writing manifest file 'ImmuneDB.egg-info/SOURCES.txt' 2019-09-06T13:43:29 Copying ImmuneDB.egg-info to build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4-py3.5.egg-info 2019-09-06T13:43:29 running install_scripts 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_collapse -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_clones -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_genotype -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_admin -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_export -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_local_align -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_sql -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_metadata -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_clone_stats -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_rest -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/run_tigger -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_import -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_identify -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_modify -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_sample_stats -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_clone_import -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_clone_trees -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 copying build/scripts-3.5/immunedb_clone_pressure -> build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_collapse to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_clones to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_genotype to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_admin to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_export to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_local_align to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_sql to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_metadata to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_clone_stats to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_rest to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/run_tigger to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_import to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_identify to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_modify to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_sample_stats to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_clone_import to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_clone_trees to 755 2019-09-06T13:43:29 changing mode of build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.data/scripts/immunedb_clone_pressure to 755 2019-09-06T13:43:29 creating build/bdist.linux-armv7l/wheel/ImmuneDB-0.29.4.dist-info/WHEEL 2019-09-06T13:43:30 Building wheel for ImmuneDB (setup.py): finished with status 'done' 2019-09-06T13:43:30 Stored in directory: /tmp/tmp7t2z6kk4 2019-09-06T13:43:30 Successfully built ImmuneDB 2019-09-06T13:43:30 Cleaning up... 2019-09-06T13:43:30 Removing source in /tmp/pip-wheel-0u3wmgdt/ImmuneDB 2019-09-06T13:43:30 Removed build tracker '/tmp/pip-req-tracker-_n_9kz3o'