2019-09-10T16:05:02 Created temporary directory: /tmp/pip-ephem-wheel-cache-pgvp3zsp
2019-09-10T16:05:02 Created temporary directory: /tmp/pip-req-tracker-w8aygycm
2019-09-10T16:05:02 Created requirements tracker '/tmp/pip-req-tracker-w8aygycm'
2019-09-10T16:05:02 Created temporary directory: /tmp/pip-wheel-w6r16s62
2019-09-10T16:05:02 Collecting mhcflurry==1.3.0
2019-09-10T16:05:02   1 location(s) to search for versions of mhcflurry:
2019-09-10T16:05:02   * https://pypi.org/simple/mhcflurry/
2019-09-10T16:05:02   Getting page https://pypi.org/simple/mhcflurry/
2019-09-10T16:05:02   Analyzing links from page https://pypi.org/simple/mhcflurry/
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/e5/cb/3fa7a07b33cf3df2797a7579428262307c08b553fdedfa14daa21ba4c789/mhcflurry-0.0.8.tar.gz#sha256=200afb6038cab6b151cdf19a183186b134df614f6607ca48f70f25ab24d65d03 (from https://pypi.org/simple/mhcflurry/), version: 0.0.8
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/35/96/070fec2dc7f14885c55321725c51e0fd3cf5b0a735fbfafd2550f5dbb1c9/mhcflurry-0.2.0.tar.gz#sha256=22c97a4fd2eb217c3424d6a4df5ca1a87c5aed5e416a12e389f5b1115aa35f8f (from https://pypi.org/simple/mhcflurry/), version: 0.2.0
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/c0/64/04096dac4409ba389ae2a473608b8c1b34722d9a11465f3fa427a8ee552f/mhcflurry-0.9.0.tar.gz#sha256=77d13f75afcf6af9c09b705af7f48f03df9fdba1cb044b2105a6f39db377ca48 (from https://pypi.org/simple/mhcflurry/), version: 0.9.0
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/8a/07/1bc0f24d7d5d3bced5b807b33ef82a7cb871c626d58674bcb45b4bc3d0e2/mhcflurry-0.9.1.tar.gz#sha256=bc3827576bc6f706af796bc797cfdc7abb03a2eb85f4b6e4b11802a53e2fb5f3 (from https://pypi.org/simple/mhcflurry/), version: 0.9.1
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/3b/70/8b01c23689e0b7fc76e60ef96c3ce96bc646b6bae39e4e24d9fc8592a1e1/mhcflurry-0.9.2.tar.gz#sha256=f919c8ac14e59121b3addc62ecade14ee289abb770e99476d2ced4ef41ab3498 (from https://pypi.org/simple/mhcflurry/), version: 0.9.2
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/2a/67/5b7689dbbe5a50aeeea3af8c23c1ed9bbe21b2d2d808cec1e9778f90da26/mhcflurry-1.0.0.tar.gz#sha256=368d170627460ec10891a69b176557068bca97f18432cf991424c0d7424ee1e3 (from https://pypi.org/simple/mhcflurry/), version: 1.0.0
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/be/bb/361ede9170c41e0ef0c5926640572cce53aa53fee3f5d75f2a0329d186af/mhcflurry-1.1.0.tar.gz#sha256=c450001ab05cdf3da2594dc3db0eb7f043a494f2f3bf8a749ce3c416838a2a70 (from https://pypi.org/simple/mhcflurry/), version: 1.1.0
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/7b/aa/99060352dd42dd916ff4c01907ddc8f962de3670f4c6ce0da0d107a721a9/mhcflurry-1.2.0.tar.gz#sha256=3c8b2f73bc12602a7678f4097c8a26f457dfc85fb4ab1d47c309e79f7d290fce (from https://pypi.org/simple/mhcflurry/), version: 1.2.0
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/27/7f/a038d510a70cc82caea968af0461a7f3fc64e32206eb4c35bc0cd0af3515/mhcflurry-1.2.1.tar.gz#sha256=018f0e35504620ea0e214565f6781a0e1e05d88f91b6052aeb87a423160621f7 (from https://pypi.org/simple/mhcflurry/), version: 1.2.1
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/5a/4c/c0b82dfeaa0458d09fbf9ab9fb1f19148cbfc235638dd3f6c0f4feeab90f/mhcflurry-1.2.2.tar.gz#sha256=561ccb2a0f1548db6c88055f0c6fffac10e70ab4b6b48ccf5126acac54a23f17 (from https://pypi.org/simple/mhcflurry/), version: 1.2.2
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/d5/f3/b4a514fd2bd637e71e25bb1d8a27cfbe7d1eeaab5d30a3e6a3f27dcdafc8/mhcflurry-1.2.3.tar.gz#sha256=ddfc8cca7ced55c68b3099f3469fffd8218523ca01fe9c84665e13ad5ff5ce51 (from https://pypi.org/simple/mhcflurry/), version: 1.2.3
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/c0/ca/d5f3d602a44f35c2707cfceebe72a6180251f631e2260578211e7230e727/mhcflurry-1.2.4.tar.gz#sha256=084b1e613dbc9845822b4bc357c14c7e28d74f364dac75c0c0f69f40fb7ad091 (from https://pypi.org/simple/mhcflurry/), version: 1.2.4
2019-09-10T16:05:02     Found link https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz#sha256=205e19e9cf4a1d2ea1fbd322dbfb1def242e1cac9219184719f8c80ae861abdb (from https://pypi.org/simple/mhcflurry/), version: 1.3.0
2019-09-10T16:05:02   Using version 1.3.0 (newest of versions: 1.3.0)
2019-09-10T16:05:02   Created temporary directory: /tmp/pip-unpack-icr4ap59
2019-09-10T16:05:03   Downloading https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz (89kB)
2019-09-10T16:05:03   Downloading from URL https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz#sha256=205e19e9cf4a1d2ea1fbd322dbfb1def242e1cac9219184719f8c80ae861abdb (from https://pypi.org/simple/mhcflurry/)
2019-09-10T16:05:03   Added mhcflurry==1.3.0 from https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz#sha256=205e19e9cf4a1d2ea1fbd322dbfb1def242e1cac9219184719f8c80ae861abdb to build tracker '/tmp/pip-req-tracker-w8aygycm'
2019-09-10T16:05:03     Running setup.py (path:/tmp/pip-wheel-w6r16s62/mhcflurry/setup.py) egg_info for package mhcflurry
2019-09-10T16:05:03     Running command python setup.py egg_info
2019-09-10T16:05:05     WARNING:root:Failed to load /tmp/pip-wheel-w6r16s62/mhcflurry/README.md
2019-09-10T16:05:05     WARNING:root:Conversion of long_description from MD to RST failed
2019-09-10T16:05:05     running egg_info
2019-09-10T16:05:05     creating pip-egg-info/mhcflurry.egg-info
2019-09-10T16:05:05     writing requirements to pip-egg-info/mhcflurry.egg-info/requires.txt
2019-09-10T16:05:05     writing dependency_links to pip-egg-info/mhcflurry.egg-info/dependency_links.txt
2019-09-10T16:05:05     writing entry points to pip-egg-info/mhcflurry.egg-info/entry_points.txt
2019-09-10T16:05:05     writing pip-egg-info/mhcflurry.egg-info/PKG-INFO
2019-09-10T16:05:05     writing top-level names to pip-egg-info/mhcflurry.egg-info/top_level.txt
2019-09-10T16:05:05     writing manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt'
2019-09-10T16:05:05     reading manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt'
2019-09-10T16:05:05     writing manifest file 'pip-egg-info/mhcflurry.egg-info/SOURCES.txt'
2019-09-10T16:05:06   Source in /tmp/pip-wheel-w6r16s62/mhcflurry has version 1.3.0, which satisfies requirement mhcflurry==1.3.0 from https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz#sha256=205e19e9cf4a1d2ea1fbd322dbfb1def242e1cac9219184719f8c80ae861abdb
2019-09-10T16:05:06   Removed mhcflurry==1.3.0 from https://files.pythonhosted.org/packages/36/2c/3aa05da8436a4c6fdd6b1c7ac0222a950dc2168346b076c3aff79e9efe9b/mhcflurry-1.3.0.tar.gz#sha256=205e19e9cf4a1d2ea1fbd322dbfb1def242e1cac9219184719f8c80ae861abdb from build tracker '/tmp/pip-req-tracker-w8aygycm'
2019-09-10T16:05:06 Building wheels for collected packages: mhcflurry
2019-09-10T16:05:06   Created temporary directory: /tmp/pip-wheel-s8hlfhkk
2019-09-10T16:05:06   Building wheel for mhcflurry (setup.py): started
2019-09-10T16:05:06   Destination directory: /tmp/pip-wheel-s8hlfhkk
2019-09-10T16:05:06   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-w6r16s62/mhcflurry/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-s8hlfhkk
2019-09-10T16:05:07   WARNING:root:Failed to load /tmp/pip-wheel-w6r16s62/mhcflurry/README.md
2019-09-10T16:05:07   WARNING:root:Conversion of long_description from MD to RST failed
2019-09-10T16:05:08   running bdist_wheel
2019-09-10T16:05:08   running build
2019-09-10T16:05:08   running build_py
2019-09-10T16:05:08   creating build
2019-09-10T16:05:08   creating build/lib
2019-09-10T16:05:08   creating build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/select_allele_specific_models_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/ensemble_centrality.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/common.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/train_allele_specific_models_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/version.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/downloads.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/regression_target.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/predict_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/cluster_parallelism.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/data_dependent_weights_initialization.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/select_pan_allele_models_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/class1_affinity_predictor.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/custom_loss.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/downloads_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/train_pan_allele_models_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/percent_rank_transform.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/amino_acid.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/local_parallelism.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/hyperparameters.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/class1_neural_network.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/scoring.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/allele_encoding.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/encodable_sequences.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/calibrate_percentile_ranks_command.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/__init__.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/testing_utils.py -> build/lib/mhcflurry
2019-09-10T16:05:08   copying mhcflurry/downloads.yml -> build/lib/mhcflurry
2019-09-10T16:05:08   installing to build/bdist.linux-armv7l/wheel
2019-09-10T16:05:08   running install
2019-09-10T16:05:08   running install_lib
2019-09-10T16:05:08   creating build/bdist.linux-armv7l
2019-09-10T16:05:08   creating build/bdist.linux-armv7l/wheel
2019-09-10T16:05:08   creating build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/select_allele_specific_models_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/ensemble_centrality.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/common.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/train_allele_specific_models_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/version.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/downloads.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/regression_target.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/predict_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/cluster_parallelism.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/data_dependent_weights_initialization.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/select_pan_allele_models_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/class1_affinity_predictor.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/custom_loss.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/downloads_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/train_pan_allele_models_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/percent_rank_transform.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/amino_acid.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/local_parallelism.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/hyperparameters.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/class1_neural_network.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/scoring.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/allele_encoding.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/encodable_sequences.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/downloads.yml -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/calibrate_percentile_ranks_command.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/__init__.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   copying build/lib/mhcflurry/testing_utils.py -> build/bdist.linux-armv7l/wheel/mhcflurry
2019-09-10T16:05:08   running install_egg_info
2019-09-10T16:05:08   running egg_info
2019-09-10T16:05:08   writing mhcflurry.egg-info/PKG-INFO
2019-09-10T16:05:08   writing entry points to mhcflurry.egg-info/entry_points.txt
2019-09-10T16:05:08   writing top-level names to mhcflurry.egg-info/top_level.txt
2019-09-10T16:05:08   writing requirements to mhcflurry.egg-info/requires.txt
2019-09-10T16:05:08   writing dependency_links to mhcflurry.egg-info/dependency_links.txt
2019-09-10T16:05:08   reading manifest file 'mhcflurry.egg-info/SOURCES.txt'
2019-09-10T16:05:08   writing manifest file 'mhcflurry.egg-info/SOURCES.txt'
2019-09-10T16:05:08   Copying mhcflurry.egg-info to build/bdist.linux-armv7l/wheel/mhcflurry-1.3.0-py3.5.egg-info
2019-09-10T16:05:08   running install_scripts
2019-09-10T16:05:09   creating build/bdist.linux-armv7l/wheel/mhcflurry-1.3.0.dist-info/WHEEL
2019-09-10T16:05:09   Building wheel for mhcflurry (setup.py): finished with status 'done'
2019-09-10T16:05:09   Stored in directory: /tmp/tmpbyjfjl8a
2019-09-10T16:05:09 Successfully built mhcflurry
2019-09-10T16:05:09 Cleaning up...
2019-09-10T16:05:09   Removing source in /tmp/pip-wheel-w6r16s62/mhcflurry
2019-09-10T16:05:09 Removed build tracker '/tmp/pip-req-tracker-w8aygycm'