2019-09-11T07:20:30 Created temporary directory: /tmp/pip-ephem-wheel-cache-dtsx0imd 2019-09-11T07:20:30 Created temporary directory: /tmp/pip-req-tracker-jn5w91j0 2019-09-11T07:20:30 Created requirements tracker '/tmp/pip-req-tracker-jn5w91j0' 2019-09-11T07:20:30 Created temporary directory: /tmp/pip-wheel-9nn12rjm 2019-09-11T07:20:30 Collecting PhyloSuite==1.1.1605 2019-09-11T07:20:30 1 location(s) to search for versions of PhyloSuite: 2019-09-11T07:20:30 * https://pypi.org/simple/phylosuite/ 2019-09-11T07:20:30 Getting page https://pypi.org/simple/phylosuite/ 2019-09-11T07:20:30 Analyzing links from page https://pypi.org/simple/phylosuite/ 2019-09-11T07:20:30 Found link https://files.pythonhosted.org/packages/b3/90/5141ae526bdea481b6c98adb426df7f25d916c0c193370d82dcb1466f568/PhyloSuite-1.1.16.post1-py2.py3-none-any.whl#sha256=04a4d071c0c7692639fce6db9b8ea55c9b8fbe50ec7725dc81a892e0444eae44 (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0), version: 1.1.16.post1 2019-09-11T07:20:30 Found link https://files.pythonhosted.org/packages/48/ba/ac637673f51684f28944fd0cafea0860a6f2df74d279dd8ac804235961de/PhyloSuite-1.1.16.post1.tar.gz#sha256=8899266a6debc7fb87aba547f8b4c370d3e042e7d76c782aa4c5e6256ab737ff (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0), version: 1.1.16.post1 2019-09-11T07:20:30 Skipping link https://files.pythonhosted.org/packages/17/16/3431420fe733bcff07ab8001a66a05fcb06a72e567b3b3fbf54f8e62588b/PhyloSuite-1.1.155-py3.6.egg#sha256=1f4fdda5c5d9077e013a005a71020a73e35342ec75ab484d37841f1c75f7a340 (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0); unsupported archive format: .egg 2019-09-11T07:20:30 Found link https://files.pythonhosted.org/packages/2f/3e/e8522fd75deb684658fc42108eab9a73843a9f6c89e477bc76ecd1f187f3/PhyloSuite-1.1.155.tar.gz#sha256=e74c7201940e3cd7ca568f1805507fd69a5ea00efed3c225ff4cd58ffecffbec (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0), version: 1.1.155 2019-09-11T07:20:30 Found link https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz#sha256=f134c812cdec47fe2a829f9696b759630990bce3e5f87728775cd9004d920673 (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0), version: 1.1.1605 2019-09-11T07:20:30 Using version 1.1.1605 (newest of versions: 1.1.1605) 2019-09-11T07:20:30 Created temporary directory: /tmp/pip-unpack-yrchckit 2019-09-11T07:20:30 Downloading https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz (9.1MB) 2019-09-11T07:20:30 Downloading from URL https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz#sha256=f134c812cdec47fe2a829f9696b759630990bce3e5f87728775cd9004d920673 (from https://pypi.org/simple/phylosuite/) (requires-python:>=3.6.0) 2019-09-11T07:20:34 Added PhyloSuite==1.1.1605 from https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz#sha256=f134c812cdec47fe2a829f9696b759630990bce3e5f87728775cd9004d920673 to build tracker '/tmp/pip-req-tracker-jn5w91j0' 2019-09-11T07:20:34 Running setup.py (path:/tmp/pip-wheel-9nn12rjm/PhyloSuite/setup.py) egg_info for package PhyloSuite 2019-09-11T07:20:34 Running command python setup.py egg_info 2019-09-11T07:20:36 running egg_info 2019-09-11T07:20:36 creating pip-egg-info/PhyloSuite.egg-info 2019-09-11T07:20:36 writing pip-egg-info/PhyloSuite.egg-info/PKG-INFO 2019-09-11T07:20:36 writing dependency_links to pip-egg-info/PhyloSuite.egg-info/dependency_links.txt 2019-09-11T07:20:36 writing entry points to pip-egg-info/PhyloSuite.egg-info/entry_points.txt 2019-09-11T07:20:36 writing requirements to pip-egg-info/PhyloSuite.egg-info/requires.txt 2019-09-11T07:20:36 writing top-level names to pip-egg-info/PhyloSuite.egg-info/top_level.txt 2019-09-11T07:20:36 writing manifest file 'pip-egg-info/PhyloSuite.egg-info/SOURCES.txt' 2019-09-11T07:20:36 reading manifest file 'pip-egg-info/PhyloSuite.egg-info/SOURCES.txt' 2019-09-11T07:20:36 reading manifest template 'MANIFEST.in' 2019-09-11T07:20:36 writing manifest file 'pip-egg-info/PhyloSuite.egg-info/SOURCES.txt' 2019-09-11T07:20:36 Source in /tmp/pip-wheel-9nn12rjm/PhyloSuite has version 1.1.1605, which satisfies requirement PhyloSuite==1.1.1605 from https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz#sha256=f134c812cdec47fe2a829f9696b759630990bce3e5f87728775cd9004d920673 2019-09-11T07:20:36 Removed PhyloSuite==1.1.1605 from https://files.pythonhosted.org/packages/63/f3/67348e003717f0b637163673732cacc5cc9e34a2bfbd1f9f4d631c49a7a3/PhyloSuite-1.1.1605.tar.gz#sha256=f134c812cdec47fe2a829f9696b759630990bce3e5f87728775cd9004d920673 from build tracker '/tmp/pip-req-tracker-jn5w91j0' 2019-09-11T07:20:36 Building wheels for collected packages: PhyloSuite 2019-09-11T07:20:36 Created temporary directory: /tmp/pip-wheel-9d5cam85 2019-09-11T07:20:36 Building wheel for PhyloSuite (setup.py): started 2019-09-11T07:20:36 Destination directory: /tmp/pip-wheel-9d5cam85 2019-09-11T07:20:36 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-9nn12rjm/PhyloSuite/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9d5cam85 2019-09-11T07:20:37 running bdist_wheel 2019-09-11T07:20:38 running build 2019-09-11T07:20:38 running build_py 2019-09-11T07:20:38 creating build 2019-09-11T07:20:38 creating build/lib 2019-09-11T07:20:38 creating build/lib/PhyloSuite 2019-09-11T07:20:38 copying PhyloSuite/__init__.py -> build/lib/PhyloSuite 2019-09-11T07:20:38 copying PhyloSuite/PhyloSuite.py -> build/lib/PhyloSuite 2019-09-11T07:20:38 creating build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_MainWindow.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_MrBayes.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_NmlPoPup.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_gbEditor.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_nexViewer.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_work_flow.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/correct_myRes.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_trimAl.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_gblocks.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_launcher.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_IQ_TREE.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_HmmCleaner.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_RSCUfig.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_popUp.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_Concatenate.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_about.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/__init__.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_SeqViewer.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_compareTable.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_exe_path.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_parseANNT_settings.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/myRes_rc.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_seqViewSetting.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_parseANNT.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_display_setting.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_notify.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_partition_defination.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_PF_exe_path.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_extract_setting.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_ModelFinder.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_dirichlet_mrbayes.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_NCBI.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_settings.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_mafft.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_untitled.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_partitionfinder.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_addFile.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_extracter.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_MACSE.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_clipboard_query.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_tRNA_reANNT.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 copying PhyloSuite/uifiles/Ui_ConvertFmt.py -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:38 creating build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/update.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/Lg_parseANNT.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/Lg_SerhNCBI.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/Lg_mafft.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/Lg_Gblocks.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/rscuStack.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/main.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:38 copying PhyloSuite/src/Lg_addFiles.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/CustomWidget.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_compareTable.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_Concatenate.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_RSCUfig.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/findANDreplace.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/handleGB.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_extracter.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_gbEditor.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/__init__.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_PartitionFinder.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_trimAl.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_workflow.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_NmlPoPup.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_Mrbayes.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/preset_values.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_settings.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_macse.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_ClipQuery.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_displaySettings.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_extractSettings.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Launcher.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/factory.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/rscuSum.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_seqViewer.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_ModelFinder.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_ConvertFmt.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/codonusage.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_IQTREE.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 copying PhyloSuite/src/Lg_HmmCleaner.py -> build/lib/PhyloSuite/src 2019-09-11T07:20:39 running egg_info 2019-09-11T07:20:39 writing PhyloSuite.egg-info/PKG-INFO 2019-09-11T07:20:39 writing dependency_links to PhyloSuite.egg-info/dependency_links.txt 2019-09-11T07:20:39 writing entry points to PhyloSuite.egg-info/entry_points.txt 2019-09-11T07:20:39 writing requirements to PhyloSuite.egg-info/requires.txt 2019-09-11T07:20:39 writing top-level names to PhyloSuite.egg-info/top_level.txt 2019-09-11T07:20:39 reading manifest file 'PhyloSuite.egg-info/SOURCES.txt' 2019-09-11T07:20:39 reading manifest template 'MANIFEST.in' 2019-09-11T07:20:39 writing manifest file 'PhyloSuite.egg-info/SOURCES.txt' 2019-09-11T07:20:39 copying PhyloSuite/NEWS.md -> build/lib/PhyloSuite 2019-09-11T07:20:39 copying PhyloSuite/PhyloSuite_citation.enw -> build/lib/PhyloSuite 2019-09-11T07:20:39 copying PhyloSuite/PhyloSuite_citation.ris -> build/lib/PhyloSuite 2019-09-11T07:20:39 copying PhyloSuite/PhyloSuite_citation.xml -> build/lib/PhyloSuite 2019-09-11T07:20:39 copying PhyloSuite/style.qss -> build/lib/PhyloSuite 2019-09-11T07:20:39 creating build/lib/PhyloSuite/manual 2019-09-11T07:20:39 copying PhyloSuite/manual/Manual.pdf -> build/lib/PhyloSuite/manual 2019-09-11T07:20:39 creating build/lib/PhyloSuite/tests 2019-09-11T07:20:39 copying PhyloSuite/tests/Test_run.pdf -> build/lib/PhyloSuite/tests 2019-09-11T07:20:39 copying PhyloSuite/tests/marine_turtle_mitogenomes.gb -> build/lib/PhyloSuite/tests 2019-09-11T07:20:39 copying PhyloSuite/uifiles/Concatenate.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/ConvertFmt.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/HmmCleaner.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/IQ_TREE.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/MACSE.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/MainWindow.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/ModelFinder.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/MrBayes.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/NCBI.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/NmlPoPup.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/PF_exe_path.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/RSCUfig.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/SeqViewer.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/about.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/addFile.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/authenticationdialog.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/clipboard_query.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/compareTable.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/dirichlet_mrbayes.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/display_setting.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/exe_path.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/extract_setting.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/extracter.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/gbEditor.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/gblocks.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/launcher.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/mafft.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/nexViewer.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/parseANNT.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/parseANNT_settings.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/partition_defination.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/partitionfinder.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/popUp.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/seqViewSetting.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/settings.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/tRNA_reANNT.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/trimAl.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/untitled.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 copying PhyloSuite/uifiles/work_flow.ui -> build/lib/PhyloSuite/uifiles 2019-09-11T07:20:39 installing to build/bdist.linux-armv7l/wheel 2019-09-11T07:20:39 running install 2019-09-11T07:20:39 running install_lib 2019-09-11T07:20:39 creating build/bdist.linux-armv7l 2019-09-11T07:20:39 creating build/bdist.linux-armv7l/wheel 2019-09-11T07:20:39 creating build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:39 creating build/bdist.linux-armv7l/wheel/PhyloSuite/tests 2019-09-11T07:20:39 copying build/lib/PhyloSuite/tests/marine_turtle_mitogenomes.gb -> build/bdist.linux-armv7l/wheel/PhyloSuite/tests 2019-09-11T07:20:40 copying build/lib/PhyloSuite/tests/Test_run.pdf -> build/bdist.linux-armv7l/wheel/PhyloSuite/tests 2019-09-11T07:20:40 creating build/bdist.linux-armv7l/wheel/PhyloSuite/manual 2019-09-11T07:20:40 copying build/lib/PhyloSuite/manual/Manual.pdf -> build/bdist.linux-armv7l/wheel/PhyloSuite/manual 2019-09-11T07:20:40 copying build/lib/PhyloSuite/NEWS.md -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:40 copying build/lib/PhyloSuite/style.qss -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:40 creating build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/HmmCleaner.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_MainWindow.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/parseANNT_settings.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/NmlPoPup.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_MrBayes.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/extracter.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_NmlPoPup.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/addFile.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_gbEditor.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/RSCUfig.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/MACSE.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/launcher.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/ConvertFmt.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_nexViewer.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_work_flow.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/mafft.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/exe_path.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/parseANNT.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Concatenate.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/correct_myRes.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/partition_defination.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/popUp.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/SeqViewer.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/PF_exe_path.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_trimAl.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/nexViewer.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/gblocks.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/partitionfinder.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/MrBayes.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_gblocks.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/NCBI.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_launcher.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_IQ_TREE.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_HmmCleaner.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/tRNA_reANNT.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_RSCUfig.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_popUp.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_Concatenate.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_about.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/__init__.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_SeqViewer.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/dirichlet_mrbayes.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_compareTable.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/gbEditor.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_exe_path.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/seqViewSetting.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/ModelFinder.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/Ui_parseANNT_settings.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/untitled.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/trimAl.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:40 copying build/lib/PhyloSuite/uifiles/myRes_rc.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/extract_setting.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_seqViewSetting.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_parseANNT.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_display_setting.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_notify.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_partition_defination.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_PF_exe_path.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_extract_setting.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_ModelFinder.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_dirichlet_mrbayes.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_NCBI.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_settings.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_mafft.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/work_flow.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/MainWindow.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/display_setting.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_untitled.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_partitionfinder.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_addFile.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/about.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_extracter.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_MACSE.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_clipboard_query.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/compareTable.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_tRNA_reANNT.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/IQ_TREE.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/Ui_ConvertFmt.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/clipboard_query.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/settings.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/uifiles/authenticationdialog.ui -> build/bdist.linux-armv7l/wheel/PhyloSuite/uifiles 2019-09-11T07:20:41 copying build/lib/PhyloSuite/__init__.py -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:41 copying build/lib/PhyloSuite/PhyloSuite_citation.enw -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:41 copying build/lib/PhyloSuite/PhyloSuite_citation.ris -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:41 creating build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/update.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_parseANNT.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_SerhNCBI.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_mafft.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_Gblocks.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/rscuStack.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/main.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_addFiles.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/CustomWidget.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_compareTable.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_Concatenate.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_RSCUfig.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/findANDreplace.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/handleGB.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_extracter.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_gbEditor.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/__init__.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_PartitionFinder.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_trimAl.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_workflow.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_NmlPoPup.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_Mrbayes.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/preset_values.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_settings.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_macse.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_ClipQuery.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_displaySettings.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_extractSettings.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Launcher.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/factory.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/rscuSum.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_seqViewer.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_ModelFinder.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_ConvertFmt.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/codonusage.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_IQTREE.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/src/Lg_HmmCleaner.py -> build/bdist.linux-armv7l/wheel/PhyloSuite/src 2019-09-11T07:20:41 copying build/lib/PhyloSuite/PhyloSuite_citation.xml -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:41 copying build/lib/PhyloSuite/PhyloSuite.py -> build/bdist.linux-armv7l/wheel/PhyloSuite 2019-09-11T07:20:41 running install_egg_info 2019-09-11T07:20:41 Copying PhyloSuite.egg-info to build/bdist.linux-armv7l/wheel/PhyloSuite-1.1.1605-py3.7.egg-info 2019-09-11T07:20:41 running install_scripts 2019-09-11T07:20:41 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2019-09-11T07:20:41 creating build/bdist.linux-armv7l/wheel/PhyloSuite-1.1.1605.dist-info/WHEEL 2019-09-11T07:20:41 creating '/tmp/pip-wheel-9d5cam85/PhyloSuite-1.1.1605-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-09-11T07:20:41 adding 'PhyloSuite/NEWS.md' 2019-09-11T07:20:41 adding 'PhyloSuite/PhyloSuite.py' 2019-09-11T07:20:41 adding 'PhyloSuite/PhyloSuite_citation.enw' 2019-09-11T07:20:41 adding 'PhyloSuite/PhyloSuite_citation.ris' 2019-09-11T07:20:41 adding 'PhyloSuite/PhyloSuite_citation.xml' 2019-09-11T07:20:41 adding 'PhyloSuite/__init__.py' 2019-09-11T07:20:41 adding 'PhyloSuite/style.qss' 2019-09-11T07:20:42 adding 'PhyloSuite/manual/Manual.pdf' 2019-09-11T07:20:42 adding 'PhyloSuite/src/CustomWidget.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Launcher.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_ClipQuery.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_Concatenate.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_ConvertFmt.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_Gblocks.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_HmmCleaner.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_IQTREE.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_ModelFinder.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_Mrbayes.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_NmlPoPup.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_PartitionFinder.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_RSCUfig.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_SerhNCBI.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_addFiles.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_compareTable.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_displaySettings.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_extractSettings.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_extracter.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_gbEditor.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_macse.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_mafft.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_parseANNT.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_seqViewer.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_settings.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_trimAl.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/Lg_workflow.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/__init__.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/codonusage.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/factory.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/findANDreplace.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/handleGB.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/main.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/preset_values.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/rscuStack.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/rscuSum.py' 2019-09-11T07:20:42 adding 'PhyloSuite/src/update.py' 2019-09-11T07:20:43 adding 'PhyloSuite/tests/Test_run.pdf' 2019-09-11T07:20:43 adding 'PhyloSuite/tests/marine_turtle_mitogenomes.gb' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Concatenate.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/ConvertFmt.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/HmmCleaner.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/IQ_TREE.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/MACSE.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/MainWindow.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/ModelFinder.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/MrBayes.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/NCBI.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/NmlPoPup.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/PF_exe_path.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/RSCUfig.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/SeqViewer.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_Concatenate.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_ConvertFmt.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_HmmCleaner.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_IQ_TREE.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_MACSE.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_MainWindow.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_ModelFinder.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_MrBayes.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_NCBI.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_NmlPoPup.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_PF_exe_path.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_RSCUfig.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_SeqViewer.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_about.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_addFile.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_clipboard_query.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_compareTable.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_dirichlet_mrbayes.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_display_setting.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_exe_path.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_extract_setting.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_extracter.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_gbEditor.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_gblocks.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_launcher.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_mafft.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_nexViewer.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_notify.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_parseANNT.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_parseANNT_settings.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_partition_defination.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_partitionfinder.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_popUp.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_seqViewSetting.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_settings.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_tRNA_reANNT.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_trimAl.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_untitled.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/Ui_work_flow.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/__init__.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/about.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/addFile.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/authenticationdialog.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/clipboard_query.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/compareTable.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/correct_myRes.py' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/dirichlet_mrbayes.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/display_setting.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/exe_path.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/extract_setting.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/extracter.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/gbEditor.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/gblocks.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/launcher.ui' 2019-09-11T07:20:43 adding 'PhyloSuite/uifiles/mafft.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/myRes_rc.py' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/nexViewer.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/parseANNT.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/parseANNT_settings.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/partition_defination.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/partitionfinder.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/popUp.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/seqViewSetting.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/settings.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/tRNA_reANNT.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/trimAl.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/untitled.ui' 2019-09-11T07:20:49 adding 'PhyloSuite/uifiles/work_flow.ui' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/LICENSE' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/METADATA' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/WHEEL' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/entry_points.txt' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/top_level.txt' 2019-09-11T07:20:49 adding 'PhyloSuite-1.1.1605.dist-info/RECORD' 2019-09-11T07:20:49 removing build/bdist.linux-armv7l/wheel 2019-09-11T07:20:50 Building wheel for PhyloSuite (setup.py): finished with status 'done' 2019-09-11T07:20:50 Stored in directory: /tmp/tmpqyvl164t 2019-09-11T07:20:50 Successfully built PhyloSuite 2019-09-11T07:20:50 Cleaning up... 2019-09-11T07:20:50 Removing source in /tmp/pip-wheel-9nn12rjm/PhyloSuite 2019-09-11T07:20:50 Removed build tracker '/tmp/pip-req-tracker-jn5w91j0'