2019-09-24T11:24:42 Created temporary directory: /tmp/pip-ephem-wheel-cache-xvgz_gzo
2019-09-24T11:24:42 Created temporary directory: /tmp/pip-req-tracker-uuu0pxkc
2019-09-24T11:24:42 Created requirements tracker '/tmp/pip-req-tracker-uuu0pxkc'
2019-09-24T11:24:42 Created temporary directory: /tmp/pip-wheel-v028fur_
2019-09-24T11:24:42 Collecting pomoxis==0.2.4
2019-09-24T11:24:42   1 location(s) to search for versions of pomoxis:
2019-09-24T11:24:42   * https://pypi.org/simple/pomoxis/
2019-09-24T11:24:42   Getting page https://pypi.org/simple/pomoxis/
2019-09-24T11:24:42   Analyzing links from page https://pypi.org/simple/pomoxis/
2019-09-24T11:24:42     Found link https://files.pythonhosted.org/packages/c0/59/a56134534e8982b057c383eb347cf395305c28c3fcd47e42ca3866401212/pomoxis-0.2.2a1.tar.gz#sha256=62f5121020ce00f056714240d50d580d0c23a64d502a80ea529d431655367e88 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a1
2019-09-24T11:24:42     Found link https://files.pythonhosted.org/packages/7f/90/ed673752a756a3477dcc242f938c46aa7fabd7e9a061438a8606c3a99e6e/pomoxis-0.2.2a2.tar.gz#sha256=cfed0307424929a9bb1e44f6acd2e1d8b5741532581ae38ce510d565979247c6 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a2
2019-09-24T11:24:42     Found link https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2
2019-09-24T11:24:42     Found link https://files.pythonhosted.org/packages/79/63/59892ab3f851f6088ba6c5f97fc1e871cbf6ce6e310b8da1e54d4d1427c1/pomoxis-0.2.3.tar.gz#sha256=e87e632ca3ef172590e059ddb7282d933294439ef71c3df67d9b56a969a45b8d (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.3
2019-09-24T11:24:42     Found link https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.4
2019-09-24T11:24:42   Using version 0.2.4 (newest of versions: 0.2.4)
2019-09-24T11:24:42   Created temporary directory: /tmp/pip-unpack-5omwk0kh
2019-09-24T11:24:43   Downloading https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz (89kB)
2019-09-24T11:24:43   Downloading from URL https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7)
2019-09-24T11:24:43   Added pomoxis==0.2.4 from https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 to build tracker '/tmp/pip-req-tracker-uuu0pxkc'
2019-09-24T11:24:43     Running setup.py (path:/tmp/pip-wheel-v028fur_/pomoxis/setup.py) egg_info for package pomoxis
2019-09-24T11:24:43     Running command python setup.py egg_info
2019-09-24T11:24:45     running egg_info
2019-09-24T11:24:45     creating pip-egg-info/pomoxis.egg-info
2019-09-24T11:24:45     writing dependency_links to pip-egg-info/pomoxis.egg-info/dependency_links.txt
2019-09-24T11:24:45     writing entry points to pip-egg-info/pomoxis.egg-info/entry_points.txt
2019-09-24T11:24:45     writing requirements to pip-egg-info/pomoxis.egg-info/requires.txt
2019-09-24T11:24:45     writing top-level names to pip-egg-info/pomoxis.egg-info/top_level.txt
2019-09-24T11:24:45     writing pip-egg-info/pomoxis.egg-info/PKG-INFO
2019-09-24T11:24:45     writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2019-09-24T11:24:45     reading manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2019-09-24T11:24:45     reading manifest template 'MANIFEST.in'
2019-09-24T11:24:45     no previously-included directories found matching 'build'
2019-09-24T11:24:45     no previously-included directories found matching 'docs'
2019-09-24T11:24:45     writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2019-09-24T11:24:45   Source in /tmp/pip-wheel-v028fur_/pomoxis has version 0.2.4, which satisfies requirement pomoxis==0.2.4 from https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2
2019-09-24T11:24:45   Removed pomoxis==0.2.4 from https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 from build tracker '/tmp/pip-req-tracker-uuu0pxkc'
2019-09-24T11:24:45 Building wheels for collected packages: pomoxis
2019-09-24T11:24:45   Created temporary directory: /tmp/pip-wheel-dh1fzq1y
2019-09-24T11:24:45   Building wheel for pomoxis (setup.py): started
2019-09-24T11:24:45   Destination directory: /tmp/pip-wheel-dh1fzq1y
2019-09-24T11:24:45   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-v028fur_/pomoxis/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dh1fzq1y
2019-09-24T11:24:47   running bdist_wheel
2019-09-24T11:24:47   running build
2019-09-24T11:24:47   running build_py
2019-09-24T11:24:48   creating build
2019-09-24T11:24:48   creating build/lib
2019-09-24T11:24:48   creating build/lib/pomoxis
2019-09-24T11:24:48   copying pomoxis/watcher.py -> build/lib/pomoxis
2019-09-24T11:24:48   copying pomoxis/__init__.py -> build/lib/pomoxis
2019-09-24T11:24:48   creating build/lib/pomoxis/align
2019-09-24T11:24:48   copying pomoxis/align/py2client.py -> build/lib/pomoxis/align
2019-09-24T11:24:48   copying pomoxis/align/minimap.py -> build/lib/pomoxis/align
2019-09-24T11:24:48   copying pomoxis/align/__init__.py -> build/lib/pomoxis/align
2019-09-24T11:24:48   copying pomoxis/align/common.py -> build/lib/pomoxis/align
2019-09-24T11:24:48   creating build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/util.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/stats_from_bam.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/subsample_bam.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/summary_from_stats.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/trim_alignments.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/coverage_from_bam.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/bio.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/ref_seqs_from_bam.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/__init__.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/qscores_from_summary.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/catalogue_errors.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/simulate_calls.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   copying pomoxis/common/common_errors_from_bam.py -> build/lib/pomoxis/common
2019-09-24T11:24:48   creating build/lib/pomoxis/provider
2019-09-24T11:24:48   copying pomoxis/provider/__init__.py -> build/lib/pomoxis/provider
2019-09-24T11:24:48   copying pomoxis/provider/replayfast5.py -> build/lib/pomoxis/provider
2019-09-24T11:24:48   running build_scripts
2019-09-24T11:24:48   creating build/scripts-3.5
2019-09-24T11:24:48   copying scripts/assess_assembly -> build/scripts-3.5
2019-09-24T11:24:48   copying scripts/intersect_assembly_errors -> build/scripts-3.5
2019-09-24T11:24:48   copying scripts/mini_align -> build/scripts-3.5
2019-09-24T11:24:48   copying scripts/mini_assemble -> build/scripts-3.5
2019-09-24T11:24:48   installing to build/bdist.linux-armv7l/wheel
2019-09-24T11:24:48   running install
2019-09-24T11:24:48   running install_lib
2019-09-24T11:24:48   creating build/bdist.linux-armv7l
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis
2019-09-24T11:24:48   copying build/lib/pomoxis/watcher.py -> build/bdist.linux-armv7l/wheel/pomoxis
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis/align
2019-09-24T11:24:48   copying build/lib/pomoxis/align/py2client.py -> build/bdist.linux-armv7l/wheel/pomoxis/align
2019-09-24T11:24:48   copying build/lib/pomoxis/align/minimap.py -> build/bdist.linux-armv7l/wheel/pomoxis/align
2019-09-24T11:24:48   copying build/lib/pomoxis/align/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/align
2019-09-24T11:24:48   copying build/lib/pomoxis/align/common.py -> build/bdist.linux-armv7l/wheel/pomoxis/align
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/util.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/stats_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/subsample_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/summary_from_stats.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/trim_alignments.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/coverage_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/bio.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/ref_seqs_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/qscores_from_summary.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/catalogue_errors.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/simulate_calls.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   copying build/lib/pomoxis/common/common_errors_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis/common
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis/provider
2019-09-24T11:24:48   copying build/lib/pomoxis/provider/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis/provider
2019-09-24T11:24:48   copying build/lib/pomoxis/provider/replayfast5.py -> build/bdist.linux-armv7l/wheel/pomoxis/provider
2019-09-24T11:24:48   copying build/lib/pomoxis/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis
2019-09-24T11:24:48   running install_egg_info
2019-09-24T11:24:48   running egg_info
2019-09-24T11:24:48   writing pomoxis.egg-info/PKG-INFO
2019-09-24T11:24:48   writing top-level names to pomoxis.egg-info/top_level.txt
2019-09-24T11:24:48   writing dependency_links to pomoxis.egg-info/dependency_links.txt
2019-09-24T11:24:48   writing entry points to pomoxis.egg-info/entry_points.txt
2019-09-24T11:24:48   writing requirements to pomoxis.egg-info/requires.txt
2019-09-24T11:24:48   reading manifest file 'pomoxis.egg-info/SOURCES.txt'
2019-09-24T11:24:48   reading manifest template 'MANIFEST.in'
2019-09-24T11:24:48   no previously-included directories found matching 'build'
2019-09-24T11:24:48   no previously-included directories found matching 'docs'
2019-09-24T11:24:48   writing manifest file 'pomoxis.egg-info/SOURCES.txt'
2019-09-24T11:24:48   Copying pomoxis.egg-info to build/bdist.linux-armv7l/wheel/pomoxis-0.2.4-py3.5.egg-info
2019-09-24T11:24:48   running install_scripts
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts
2019-09-24T11:24:48   copying build/scripts-3.5/mini_assemble -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts
2019-09-24T11:24:48   copying build/scripts-3.5/assess_assembly -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts
2019-09-24T11:24:48   copying build/scripts-3.5/intersect_assembly_errors -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts
2019-09-24T11:24:48   copying build/scripts-3.5/mini_align -> build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts
2019-09-24T11:24:48   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts/mini_assemble to 755
2019-09-24T11:24:48   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts/assess_assembly to 755
2019-09-24T11:24:48   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts/intersect_assembly_errors to 755
2019-09-24T11:24:48   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.data/scripts/mini_align to 755
2019-09-24T11:24:48   creating build/bdist.linux-armv7l/wheel/pomoxis-0.2.4.dist-info/WHEEL
2019-09-24T11:24:49   Building wheel for pomoxis (setup.py): finished with status 'done'
2019-09-24T11:24:49   Stored in directory: /tmp/tmp_6otrzcx
2019-09-24T11:24:49 Successfully built pomoxis
2019-09-24T11:24:49 Cleaning up...
2019-09-24T11:24:49   Removing source in /tmp/pip-wheel-v028fur_/pomoxis
2019-09-24T11:24:49 Removed build tracker '/tmp/pip-req-tracker-uuu0pxkc'