Created temporary directory: /tmp/pip-ephem-wheel-cache-5kmu46yx Created temporary directory: /tmp/pip-req-tracker-wkp7gx05 Created requirements tracker '/tmp/pip-req-tracker-wkp7gx05' Created temporary directory: /tmp/pip-wheel-0hr6djsj Collecting annot-utils==0.3.1 1 location(s) to search for versions of annot-utils: * https://pypi.org/simple/annot-utils/ Getting page https://pypi.org/simple/annot-utils/ Analyzing links from page https://pypi.org/simple/annot-utils/ Found link https://files.pythonhosted.org/packages/ca/d1/37ccfd5c7689605e5f64773fc5df4065f9d467109e169e4c434b3eedf670/annot_utils-0.2.0rc1.tar.gz#sha256=2acf1ed4902f32b7bbba3d49015e18f750962c7efad7a9d5009accaee453a406 (from https://pypi.org/simple/annot-utils/), version: 0.2.0rc1 Found link https://files.pythonhosted.org/packages/c1/d8/da6727cc7ada847ba3dada52717aadbe3ed7b6ef95064414e8e6a557e7d1/annot_utils-0.2.0.tar.gz#sha256=a33ad25f83e318dd5e5b604760f713209730a274902c6cae6b0827b2375dcbcc (from https://pypi.org/simple/annot-utils/), version: 0.2.0 Found link https://files.pythonhosted.org/packages/30/06/45f92f9888aabfc21c070d3ce9fd5c72f8bbe69afb24df0f32766f19e4eb/annot_utils-0.2.1.tar.gz#sha256=075cd1c8552bf0475fb8360172f6f515c236582ab1e36b4bcad2c3191b2ad72f (from https://pypi.org/simple/annot-utils/), version: 0.2.1 Found link https://files.pythonhosted.org/packages/98/2f/3ba534086d5ed51accbe79ec91ddc73477a1111f14af407e68693555bfa0/annot_utils-0.3.0b1-py3-none-any.whl#sha256=9a7143f58eb6e2d7d71b5fd196d38e374a7be2534c7b761c7ac6b073506a6303 (from https://pypi.org/simple/annot-utils/), version: 0.3.0b1 Found link https://files.pythonhosted.org/packages/cd/ad/a679713f88dc0615aad51e72fbdfd911a089f55fbf8b7758b183816a491f/annot_utils-0.3.0b1.tar.gz#sha256=fb9c72a59eac75c252c4ddcd8b0500b978b7bb78568357e997c79ae71f0ce745 (from https://pypi.org/simple/annot-utils/), version: 0.3.0b1 Found link https://files.pythonhosted.org/packages/3f/b9/b39d616aa7c63a3cc91e0f5d8e240cd327ee1c483e98028ed238665f4491/annot_utils-0.3.0b2.tar.gz#sha256=ae633e91e2768bab0a11874c28d5c432461a5cb1fff17a406dcf2f232d1f9ebc (from https://pypi.org/simple/annot-utils/), version: 0.3.0b2 Found link https://files.pythonhosted.org/packages/42/bc/229680b2fec2da6f882427f00d84e442a729051618be5f9087cc63d52d7c/annot_utils-0.3.0b3.tar.gz#sha256=2e56412f463748e3e4ab5ad3048d7a3eb2fac5a6deb4d9a7b6d028785cbc4f82 (from https://pypi.org/simple/annot-utils/), version: 0.3.0b3 Found link https://files.pythonhosted.org/packages/d5/c0/b7c187d05572d1baa463ed68dbe72ce4f7ef2de89ed58513104836a1a3f8/annot_utils-0.3.0.tar.gz#sha256=111bed371f223d954f46325968350961dbf8fd73194a6a121cda3a632c2cb7ae (from https://pypi.org/simple/annot-utils/), version: 0.3.0 Found link https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz#sha256=ae96a73025a8c5a04c726343acee15430d9b76318fc1c6addacbeebe66a91bcf (from https://pypi.org/simple/annot-utils/), version: 0.3.1 Using version 0.3.1 (newest of versions: 0.3.1) Created temporary directory: /tmp/pip-unpack-9bm1u5ly Downloading https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz (58.6MB) Downloading from URL https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz#sha256=ae96a73025a8c5a04c726343acee15430d9b76318fc1c6addacbeebe66a91bcf (from https://pypi.org/simple/annot-utils/) Added annot-utils==0.3.1 from https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz#sha256=ae96a73025a8c5a04c726343acee15430d9b76318fc1c6addacbeebe66a91bcf to build tracker '/tmp/pip-req-tracker-wkp7gx05' Running setup.py (path:/tmp/pip-wheel-0hr6djsj/annot-utils/setup.py) egg_info for package annot-utils Running command python setup.py egg_info running egg_info creating pip-egg-info/annot_utils.egg-info writing pip-egg-info/annot_utils.egg-info/PKG-INFO writing dependency_links to pip-egg-info/annot_utils.egg-info/dependency_links.txt writing entry points to pip-egg-info/annot_utils.egg-info/entry_points.txt writing top-level names to pip-egg-info/annot_utils.egg-info/top_level.txt writing manifest file 'pip-egg-info/annot_utils.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/annot_utils.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/annot_utils.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-0hr6djsj/annot-utils has version 0.3.1, which satisfies requirement annot-utils==0.3.1 from https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz#sha256=ae96a73025a8c5a04c726343acee15430d9b76318fc1c6addacbeebe66a91bcf Removed annot-utils==0.3.1 from https://files.pythonhosted.org/packages/57/d7/9c82e7bd40ce3afb361447929f49afb21aa9c65d55999a7ddcfc367a1ea0/annot_utils-0.3.1.tar.gz#sha256=ae96a73025a8c5a04c726343acee15430d9b76318fc1c6addacbeebe66a91bcf from build tracker '/tmp/pip-req-tracker-wkp7gx05' Building wheels for collected packages: annot-utils Created temporary directory: /tmp/pip-wheel-8iuft72r Running setup.py bdist_wheel for annot-utils: started Destination directory: /tmp/pip-wheel-8iuft72r Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-0hr6djsj/annot-utils/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-8iuft72r running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/annot_utils copying annot_utils/logger.py -> build/lib/annot_utils copying annot_utils/gene.py -> build/lib/annot_utils copying annot_utils/chr_name.py -> build/lib/annot_utils copying annot_utils/junction.py -> build/lib/annot_utils copying annot_utils/run.py -> build/lib/annot_utils copying annot_utils/utils.py -> build/lib/annot_utils copying annot_utils/coding.py -> build/lib/annot_utils copying annot_utils/version.py -> build/lib/annot_utils copying annot_utils/boundary.py -> build/lib/annot_utils copying annot_utils/__init__.py -> build/lib/annot_utils copying annot_utils/exon.py -> build/lib/annot_utils copying annot_utils/parser.py -> build/lib/annot_utils copying annot_utils/simple_repeat.py -> build/lib/annot_utils creating build/lib/annot_utils/data creating build/lib/annot_utils/data/mm10 copying annot_utils/data/mm10/wgEncodeGencodeCompVM22.txt.gz -> build/lib/annot_utils/data/mm10 copying annot_utils/data/mm10/GCF_000001635.20.assembly.txt -> build/lib/annot_utils/data/mm10 copying annot_utils/data/mm10/refGene.txt.gz -> build/lib/annot_utils/data/mm10 copying annot_utils/data/mm10/wgEncodeGencodeBasicVM18.txt.gz -> build/lib/annot_utils/data/mm10 creating build/lib/annot_utils/data/hg19 copying annot_utils/data/hg19/wgEncodeGencodeCompV31lift37.txt.gz -> build/lib/annot_utils/data/hg19 copying annot_utils/data/hg19/GCF_000001405.13.assembly.txt -> build/lib/annot_utils/data/hg19 copying annot_utils/data/hg19/wgEncodeGencodeBasicV19.txt.gz -> build/lib/annot_utils/data/hg19 copying annot_utils/data/hg19/refGene.txt.gz -> build/lib/annot_utils/data/hg19 creating build/lib/annot_utils/data/hg38 copying annot_utils/data/hg38/wgEncodeGencodeCompV31.txt.gz -> build/lib/annot_utils/data/hg38 copying annot_utils/data/hg38/GCF_000001405.26.assembly.txt -> build/lib/annot_utils/data/hg38 copying annot_utils/data/hg38/wgEncodeGencodeBasicV28.txt.gz -> build/lib/annot_utils/data/hg38 copying annot_utils/data/hg38/refGene.txt.gz -> build/lib/annot_utils/data/hg38 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/logger.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/gene.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/chr_name.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/junction.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/run.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/utils.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/coding.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/version.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/boundary.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/__init__.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/exon.py -> build/bdist.linux-armv7l/wheel/annot_utils copying build/lib/annot_utils/parser.py -> build/bdist.linux-armv7l/wheel/annot_utils creating build/bdist.linux-armv7l/wheel/annot_utils/data creating build/bdist.linux-armv7l/wheel/annot_utils/data/mm10 copying build/lib/annot_utils/data/mm10/wgEncodeGencodeCompVM22.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/mm10 copying build/lib/annot_utils/data/mm10/GCF_000001635.20.assembly.txt -> build/bdist.linux-armv7l/wheel/annot_utils/data/mm10 copying build/lib/annot_utils/data/mm10/refGene.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/mm10 copying build/lib/annot_utils/data/mm10/wgEncodeGencodeBasicVM18.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/mm10 creating build/bdist.linux-armv7l/wheel/annot_utils/data/hg19 copying build/lib/annot_utils/data/hg19/wgEncodeGencodeCompV31lift37.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg19 copying build/lib/annot_utils/data/hg19/GCF_000001405.13.assembly.txt -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg19 copying build/lib/annot_utils/data/hg19/wgEncodeGencodeBasicV19.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg19 copying build/lib/annot_utils/data/hg19/refGene.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg19 creating build/bdist.linux-armv7l/wheel/annot_utils/data/hg38 copying build/lib/annot_utils/data/hg38/wgEncodeGencodeCompV31.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg38 copying build/lib/annot_utils/data/hg38/GCF_000001405.26.assembly.txt -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg38 copying build/lib/annot_utils/data/hg38/wgEncodeGencodeBasicV28.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg38 copying build/lib/annot_utils/data/hg38/refGene.txt.gz -> build/bdist.linux-armv7l/wheel/annot_utils/data/hg38 copying build/lib/annot_utils/simple_repeat.py -> build/bdist.linux-armv7l/wheel/annot_utils running install_egg_info running egg_info writing annot_utils.egg-info/PKG-INFO writing dependency_links to annot_utils.egg-info/dependency_links.txt writing entry points to annot_utils.egg-info/entry_points.txt writing top-level names to annot_utils.egg-info/top_level.txt reading manifest file 'annot_utils.egg-info/SOURCES.txt' writing manifest file 'annot_utils.egg-info/SOURCES.txt' Copying annot_utils.egg-info to build/bdist.linux-armv7l/wheel/annot_utils-0.3.1-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/annot_utils-0.3.1.dist-info/WHEEL creating '/tmp/pip-wheel-8iuft72r/annot_utils-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'annot_utils/__init__.py' adding 'annot_utils/boundary.py' adding 'annot_utils/chr_name.py' adding 'annot_utils/coding.py' adding 'annot_utils/exon.py' adding 'annot_utils/gene.py' adding 'annot_utils/junction.py' adding 'annot_utils/logger.py' adding 'annot_utils/parser.py' adding 'annot_utils/run.py' adding 'annot_utils/simple_repeat.py' adding 'annot_utils/utils.py' adding 'annot_utils/version.py' adding 'annot_utils/data/hg19/GCF_000001405.13.assembly.txt' adding 'annot_utils/data/hg19/refGene.txt.gz' adding 'annot_utils/data/hg19/wgEncodeGencodeBasicV19.txt.gz' adding 'annot_utils/data/hg19/wgEncodeGencodeCompV31lift37.txt.gz' adding 'annot_utils/data/hg38/GCF_000001405.26.assembly.txt' adding 'annot_utils/data/hg38/refGene.txt.gz' adding 'annot_utils/data/hg38/wgEncodeGencodeBasicV28.txt.gz' adding 'annot_utils/data/hg38/wgEncodeGencodeCompV31.txt.gz' adding 'annot_utils/data/mm10/GCF_000001635.20.assembly.txt' adding 'annot_utils/data/mm10/refGene.txt.gz' adding 'annot_utils/data/mm10/wgEncodeGencodeBasicVM18.txt.gz' adding 'annot_utils/data/mm10/wgEncodeGencodeCompVM22.txt.gz' adding 'annot_utils-0.3.1.dist-info/METADATA' adding 'annot_utils-0.3.1.dist-info/WHEEL' adding 'annot_utils-0.3.1.dist-info/entry_points.txt' adding 'annot_utils-0.3.1.dist-info/top_level.txt' adding 'annot_utils-0.3.1.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for annot-utils: finished with status 'done' Stored in directory: /tmp/tmph2hp59ne Successfully built annot-utils Cleaning up... Removing source in /tmp/pip-wheel-0hr6djsj/annot-utils Removed build tracker '/tmp/pip-req-tracker-wkp7gx05'