Created temporary directory: /tmp/pip-ephem-wheel-cache-f5fd0bu2 Created temporary directory: /tmp/pip-req-tracker-pwt3dody Created requirements tracker '/tmp/pip-req-tracker-pwt3dody' Created temporary directory: /tmp/pip-wheel-rp89hgvf Collecting gromacs-py==1.0.0.post5 1 location(s) to search for versions of gromacs-py: * https://pypi.org/simple/gromacs-py/ Getting page https://pypi.org/simple/gromacs-py/ Analyzing links from page https://pypi.org/simple/gromacs-py/ Found link https://files.pythonhosted.org/packages/81/19/aa84c354170f3da5036b2aa34fa95f328ee3b45a094cc2bfe706c21c0526/gromacs_py-1.0.tar.gz#sha256=197044e70905dcc36bf134f402687088ce3f68307545dd9a724a12d110a0e5c1 (from https://pypi.org/simple/gromacs-py/), version: 1.0 Found link https://files.pythonhosted.org/packages/ea/c2/02fafcd4fd0eb34015e76700fa471653c613ee58c8931c0c06c4453b9b99/gromacs_py-1.0.0.post1.tar.gz#sha256=41ab83f8a5e541ebb3e422c398dea77e06411a9a015605733c2a4bc64d639d73 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post1 Found link https://files.pythonhosted.org/packages/ac/24/d8cff1d35512873e821972103480ed8133bdd0b670dee7520e40a167ff7f/gromacs_py-1.0.0.post2.tar.gz#sha256=16dc1ed4b0a32f1decb4f26065c67a60e67a5845f5bbe54d31c4a8016c95254b (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post2 Found link https://files.pythonhosted.org/packages/05/69/2ee04de7229b6a6f33033fdf6c1f3a69f7da76383ac8d488db94698cb3a0/gromacs_py-1.0.0.post3.tar.gz#sha256=c270fb4a29b2b369c8b9b0f2f0d58742d72a472ce8f51051b51ea5fc3c122934 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post3 Skipping link https://files.pythonhosted.org/packages/38/22/84351d37feae9720f5193332d4e43f4f948a57b1bf3cac69675aa8eb255a/gromacs_py-1.0.0.post4-py3.6.egg#sha256=9cbe818f3b60fb2818b196041ecd5d711615b3e4063045707168588825e8accd (from https://pypi.org/simple/gromacs-py/); unsupported archive format: .egg Found link https://files.pythonhosted.org/packages/a3/5b/afe1e0db10bcacbf20f6971f0a49c08bf37216f00869f699a0afd9a2017d/gromacs_py-1.0.0.post4.tar.gz#sha256=bbedcd55b4a808101681cae97bbf788274fe62de506c95042ac86c54a3358d08 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post4 Found link https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post5 Using version 1.0.0.post5 (newest of versions: 1.0.0.post5) Created temporary directory: /tmp/pip-unpack-oj8bjc5i Downloading https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz (947kB) Downloading from URL https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 (from https://pypi.org/simple/gromacs-py/) Added gromacs-py==1.0.0.post5 from https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 to build tracker '/tmp/pip-req-tracker-pwt3dody' Running setup.py (path:/tmp/pip-wheel-rp89hgvf/gromacs-py/setup.py) egg_info for package gromacs-py Running command python setup.py egg_info running egg_info creating pip-egg-info/gromacs_py.egg-info writing requirements to pip-egg-info/gromacs_py.egg-info/requires.txt writing dependency_links to pip-egg-info/gromacs_py.egg-info/dependency_links.txt writing pip-egg-info/gromacs_py.egg-info/PKG-INFO writing top-level names to pip-egg-info/gromacs_py.egg-info/top_level.txt writing manifest file 'pip-egg-info/gromacs_py.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/gromacs_py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pip-egg-info/gromacs_py.egg-info/SOURCES.txt' /usr/local/lib/python3.4/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '1.0.0post5' to '1.0.0.post5' normalized_version, Source in /tmp/pip-wheel-rp89hgvf/gromacs-py has version 1.0.0.post5, which satisfies requirement gromacs-py==1.0.0.post5 from https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 Removed gromacs-py==1.0.0.post5 from https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 from build tracker '/tmp/pip-req-tracker-pwt3dody' Building wheels for collected packages: gromacs-py Created temporary directory: /tmp/pip-wheel-g595293s Running setup.py bdist_wheel for gromacs-py: started Destination directory: /tmp/pip-wheel-g595293s Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-rp89hgvf/gromacs-py/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-g595293s /usr/local/lib/python3.4/dist-packages/setuptools/dist.py:472: UserWarning: Normalizing '1.0.0post5' to '1.0.0.post5' normalized_version, running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/gromacs_py copying gromacs_py/top_em_equi_3_step_prod.py -> build/lib/gromacs_py copying gromacs_py/production.py -> build/lib/gromacs_py copying gromacs_py/prepare_prot_topo_edit.py -> build/lib/gromacs_py copying gromacs_py/__init__.py -> build/lib/gromacs_py copying gromacs_py/equi_3_step.py -> build/lib/gromacs_py copying gromacs_py/extend.py -> build/lib/gromacs_py copying gromacs_py/insert_mol_no_vmd.py -> build/lib/gromacs_py copying gromacs_py/minimize_pdb_and_cyclic.py -> build/lib/gromacs_py copying gromacs_py/prepare_prot.py -> build/lib/gromacs_py copying gromacs_py/create_top.py -> build/lib/gromacs_py copying gromacs_py/solvate_ions.py -> build/lib/gromacs_py copying gromacs_py/minimize_pdb.py -> build/lib/gromacs_py copying gromacs_py/create_peptide.py -> build/lib/gromacs_py copying gromacs_py/test_gromacs_py.py -> build/lib/gromacs_py copying gromacs_py/sim_pep_prot.py -> build/lib/gromacs_py creating build/lib/gromacs_py/gromacs copying gromacs_py/gromacs/__init__.py -> build/lib/gromacs_py/gromacs copying gromacs_py/gromacs/gmx5.py -> build/lib/gromacs_py/gromacs creating build/lib/gromacs_py/gromacs/tools copying gromacs_py/gromacs/tools/__init__.py -> build/lib/gromacs_py/gromacs/tools copying gromacs_py/gromacs/tools/pdb_manip.py -> build/lib/gromacs_py/gromacs/tools copying gromacs_py/gromacs/tools/monitor.py -> build/lib/gromacs_py/gromacs/tools copying gromacs_py/gromacs/tools/pdb2pqr.py -> build/lib/gromacs_py/gromacs/tools copying gromacs_py/gromacs/tools/os_command.py -> build/lib/gromacs_py/gromacs/tools running egg_info writing requirements to gromacs_py.egg-info/requires.txt writing top-level names to gromacs_py.egg-info/top_level.txt writing dependency_links to gromacs_py.egg-info/dependency_links.txt writing gromacs_py.egg-info/PKG-INFO reading manifest file 'gromacs_py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'gromacs_py.egg-info/SOURCES.txt' creating build/lib/gromacs_py/test creating build/lib/gromacs_py/test/input copying gromacs_py/test/input/1AWR-055_bestene1-mc.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/1dpx.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/1jd4.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/1rxz.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/1y0m.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/4n1m.pdb -> build/lib/gromacs_py/test/input copying gromacs_py/test/input/5vav.pdb -> build/lib/gromacs_py/test/input creating build/lib/gromacs_py/gromacs/template copying gromacs_py/gromacs/template/equi.mdp -> build/lib/gromacs_py/gromacs/template copying gromacs_py/gromacs/template/equi_implicit_sol.mdp -> build/lib/gromacs_py/gromacs/template copying gromacs_py/gromacs/template/mini.mdp -> build/lib/gromacs_py/gromacs/template creating build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/atomtypes.atp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/cmap.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/ffbonded.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/ffnonbonded.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.doc -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/gb.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/ions.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.arn -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.c.tdb -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.hdb -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.n.tdb -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.r2b -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.rtp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.vsd -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/nbfix.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/old_c36_cmap.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/spc.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/spce.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/tip3p.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/tip4p.itp -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff copying gromacs_py/gromacs/template/charmm36-jul2017.ff/watermodels.dat -> build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/top_em_equi_3_step_prod.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/production.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/prepare_prot_topo_edit.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/equi_3_step.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/extend.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/insert_mol_no_vmd.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/minimize_pdb_and_cyclic.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/prepare_prot.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/create_top.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/solvate_ions.py -> build/bdist.linux-armv7l/wheel/gromacs_py creating build/bdist.linux-armv7l/wheel/gromacs_py/gromacs creating build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/tools/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/tools/pdb_manip.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/tools/monitor.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/tools/pdb2pqr.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/tools/os_command.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/tools copying build/lib/gromacs_py/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs copying build/lib/gromacs_py/gromacs/gmx5.py -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs creating build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template copying build/lib/gromacs_py/gromacs/template/equi.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template creating build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.hdb -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/old_c36_cmap.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/spce.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.n.tdb -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.arn -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.doc -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/cmap.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/atomtypes.atp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/nbfix.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/spc.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/ions.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.vsd -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.c.tdb -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.rtp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/gb.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.r2b -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template/charmm36-jul2017.ff copying build/lib/gromacs_py/gromacs/template/equi_implicit_sol.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template copying build/lib/gromacs_py/gromacs/template/mini.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/gromacs/template creating build/bdist.linux-armv7l/wheel/gromacs_py/test creating build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/1rxz.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/4n1m.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/1AWR-055_bestene1-mc.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/5vav.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/1jd4.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/1dpx.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/test/input/1y0m.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test/input copying build/lib/gromacs_py/minimize_pdb.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/create_peptide.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/test_gromacs_py.py -> build/bdist.linux-armv7l/wheel/gromacs_py copying build/lib/gromacs_py/sim_pep_prot.py -> build/bdist.linux-armv7l/wheel/gromacs_py running install_egg_info Copying gromacs_py.egg-info to build/bdist.linux-armv7l/wheel/gromacs_py-1.0.0.post5-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/gromacs_py-1.0.0.post5.dist-info/WHEEL creating '/tmp/pip-wheel-g595293s/gromacs_py-1.0.0.post5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'gromacs_py/__init__.py' adding 'gromacs_py/create_peptide.py' adding 'gromacs_py/create_top.py' adding 'gromacs_py/equi_3_step.py' adding 'gromacs_py/extend.py' adding 'gromacs_py/insert_mol_no_vmd.py' adding 'gromacs_py/minimize_pdb.py' adding 'gromacs_py/minimize_pdb_and_cyclic.py' adding 'gromacs_py/prepare_prot.py' adding 'gromacs_py/prepare_prot_topo_edit.py' adding 'gromacs_py/production.py' adding 'gromacs_py/sim_pep_prot.py' adding 'gromacs_py/solvate_ions.py' adding 'gromacs_py/test_gromacs_py.py' adding 'gromacs_py/top_em_equi_3_step_prod.py' adding 'gromacs_py/gromacs/__init__.py' adding 'gromacs_py/gromacs/gmx5.py' adding 'gromacs_py/gromacs/template/equi.mdp' adding 'gromacs_py/gromacs/template/equi_implicit_sol.mdp' adding 'gromacs_py/gromacs/template/mini.mdp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/atomtypes.atp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/cmap.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/ffbonded.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/ffnonbonded.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.doc' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/gb.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/ions.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.arn' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.c.tdb' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.hdb' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.n.tdb' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.r2b' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.rtp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.vsd' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/nbfix.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/old_c36_cmap.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/spc.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/spce.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/tip3p.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/tip4p.itp' adding 'gromacs_py/gromacs/template/charmm36-jul2017.ff/watermodels.dat' adding 'gromacs_py/gromacs/tools/__init__.py' adding 'gromacs_py/gromacs/tools/monitor.py' adding 'gromacs_py/gromacs/tools/os_command.py' adding 'gromacs_py/gromacs/tools/pdb2pqr.py' adding 'gromacs_py/gromacs/tools/pdb_manip.py' adding 'gromacs_py/test/input/1AWR-055_bestene1-mc.pdb' adding 'gromacs_py/test/input/1dpx.pdb' adding 'gromacs_py/test/input/1jd4.pdb' adding 'gromacs_py/test/input/1rxz.pdb' adding 'gromacs_py/test/input/1y0m.pdb' adding 'gromacs_py/test/input/4n1m.pdb' adding 'gromacs_py/test/input/5vav.pdb' adding 'gromacs_py-1.0.0.post5.dist-info/METADATA' adding 'gromacs_py-1.0.0.post5.dist-info/WHEEL' adding 'gromacs_py-1.0.0.post5.dist-info/top_level.txt' adding 'gromacs_py-1.0.0.post5.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for gromacs-py: finished with status 'done' Stored in directory: /tmp/tmppon5dflx Successfully built gromacs-py Cleaning up... Removing source in /tmp/pip-wheel-rp89hgvf/gromacs-py Removed build tracker '/tmp/pip-req-tracker-pwt3dody'