2019-10-17T18:02:42 Created temporary directory: /tmp/pip-ephem-wheel-cache-z0am8b41 2019-10-17T18:02:42 Created temporary directory: /tmp/pip-req-tracker-g3f9ninp 2019-10-17T18:02:42 Created requirements tracker '/tmp/pip-req-tracker-g3f9ninp' 2019-10-17T18:02:42 Created temporary directory: /tmp/pip-wheel-4f25hr6f 2019-10-17T18:02:42 Collecting dnacauldron==1.1.0 2019-10-17T18:02:42 1 location(s) to search for versions of dnacauldron: 2019-10-17T18:02:42 * https://pypi.org/simple/dnacauldron/ 2019-10-17T18:02:42 Getting page https://pypi.org/simple/dnacauldron/ 2019-10-17T18:02:43 Analyzing links from page https://pypi.org/simple/dnacauldron/ 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/70/81/efb75a2fd9180ec9c6fc4798ddb2120b4c19a9ee1b2dc57f67b24436f6c0/dnacauldron-0.1.0.tar.gz#sha256=bc9143f4c25e6a537c97799c3c6e3babead0c80075de89f2d8855c562d58c034 (from https://pypi.org/simple/dnacauldron/), version: 0.1.0 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/36/7d/ffa4a2968d5cdd104c2557f1ef7b69dea16527aad970e6f4581d17d45fa4/dnacauldron-0.1.1.tar.gz#sha256=4debcac8027faa7083a64f70b1ea3d0659096ca6fc92d31f25a63b9d07437c6c (from https://pypi.org/simple/dnacauldron/), version: 0.1.1 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/a5/fc/8541863ce69a0f5401c9770f4053de1551de9567051018207a73e31fe39d/dnacauldron-0.1.2.tar.gz#sha256=064cfbf5c372415546e10cd05a8eb092c5a4a79f86d5e8255254b2e15e5b168c (from https://pypi.org/simple/dnacauldron/), version: 0.1.2 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/08/76/51fe6d4244834471c40ef1ef9182120ba5999bd2d0dbf11cdd316cf3d059/dnacauldron-0.1.3.tar.gz#sha256=c36e76264d50125132681aebef4cf55de9bddb6f97a6e7a608f81911fc6f6ef4 (from https://pypi.org/simple/dnacauldron/), version: 0.1.3 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/cd/b1/85b1f3a9d42a63daa3efc20dc8b8a0f124d91320208824845d6329f9af6f/dnacauldron-0.1.4.tar.gz#sha256=e0a534b4f06c727366b2ef25c05a9cd45056ac6c6387ab052cbceb7a59ec4ec0 (from https://pypi.org/simple/dnacauldron/), version: 0.1.4 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/bc/bb/ee372da320440c0dcb433af9c66804fb1b87ce97000e71693ac19e43feb8/dnacauldron-0.1.5.tar.gz#sha256=870d92babb5a015577a52a1c28c58f624809ee18313190866bfc2a320c8fde9d (from https://pypi.org/simple/dnacauldron/), version: 0.1.5 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/64/72/1e55427314288466e7034d40d9ad788d8a635b2cc78eaf5085ce552612f0/dnacauldron-0.1.6.tar.gz#sha256=0ec9c9befed803b592f6a112086a4450941c41af3d7b60b074bf518053926426 (from https://pypi.org/simple/dnacauldron/), version: 0.1.6 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/4f/6c/7f6c1da4cdb969819854fdcbc99a85a4851c1b87f2014628c1595408c7e2/dnacauldron-0.1.7.tar.gz#sha256=742f2ca7f1fb9c0d680acfccf16f514ea2dd18129f19a3fa6122bd2022606d55 (from https://pypi.org/simple/dnacauldron/), version: 0.1.7 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/4d/39/5a02976562ff6f6a1c83596b1c7aea2fcd6d36564e81fee7558cc38e3d10/dnacauldron-0.1.8.tar.gz#sha256=7f92f09709d6b7f1301945e66b044b0879f02f9ced19b33f4c9df0f503a5ad86 (from https://pypi.org/simple/dnacauldron/), version: 0.1.8 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/49/76/784d5d8548f6f4fd0b0bbc938f714440fc094d39feab616f64639f89c99f/dnacauldron-0.1.9.tar.gz#sha256=133635bcd5f6c7368cbc05d52fec9d2f22b6cdeccc8eac21e7feece94c1df709 (from https://pypi.org/simple/dnacauldron/), version: 0.1.9 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/2d/01/bb2393997ca8692871b0517c1608fbb8907c7ea4cf20b1a77e54eaddc54a/dnacauldron-0.1.10.tar.gz#sha256=227b5f457d97c21ad9bb550614e0d03d31cb86382a1e11d111a13f654c45cfbb (from https://pypi.org/simple/dnacauldron/), version: 0.1.10 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/b1/9e/7902531d008c7528886272eb59fb2d51b81285921c41795f0474bd095847/dnacauldron-0.1.11.tar.gz#sha256=79c5ae42aeeaa6ff4af4a0e13205986c5b0a91f5708a3f219f41ac2c1ca0ba98 (from https://pypi.org/simple/dnacauldron/), version: 0.1.11 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/a1/b8/0c5c670967ca730ad833a9be3ea8a75fa710aa83876a10b98a94b3e0b44e/dnacauldron-1.0.1.tar.gz#sha256=80c939c757010f05acad61f7d37ba852970456ecf296e63780426eb75349b7fc (from https://pypi.org/simple/dnacauldron/), version: 1.0.1 2019-10-17T18:02:43 Found link https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz#sha256=8ff4fca281ec212b88d18ecbb795d31a43ae6d4083cb7bca6f2dc118142ff036 (from https://pypi.org/simple/dnacauldron/), version: 1.1.0 2019-10-17T18:02:43 Using version 1.1.0 (newest of versions: 1.1.0) 2019-10-17T18:02:43 Created temporary directory: /tmp/pip-unpack-zd7j4y16 2019-10-17T18:02:43 Downloading https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz (177kB) 2019-10-17T18:02:43 Downloading from URL https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz#sha256=8ff4fca281ec212b88d18ecbb795d31a43ae6d4083cb7bca6f2dc118142ff036 (from https://pypi.org/simple/dnacauldron/) 2019-10-17T18:02:43 Added dnacauldron==1.1.0 from https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz#sha256=8ff4fca281ec212b88d18ecbb795d31a43ae6d4083cb7bca6f2dc118142ff036 to build tracker '/tmp/pip-req-tracker-g3f9ninp' 2019-10-17T18:02:43 Running setup.py (path:/tmp/pip-wheel-4f25hr6f/dnacauldron/setup.py) egg_info for package dnacauldron 2019-10-17T18:02:43 Running command python setup.py egg_info 2019-10-17T18:02:45 running egg_info 2019-10-17T18:02:45 creating pip-egg-info/dnacauldron.egg-info 2019-10-17T18:02:45 writing top-level names to pip-egg-info/dnacauldron.egg-info/top_level.txt 2019-10-17T18:02:45 writing dependency_links to pip-egg-info/dnacauldron.egg-info/dependency_links.txt 2019-10-17T18:02:45 writing pip-egg-info/dnacauldron.egg-info/PKG-INFO 2019-10-17T18:02:45 writing requirements to pip-egg-info/dnacauldron.egg-info/requires.txt 2019-10-17T18:02:45 writing manifest file 'pip-egg-info/dnacauldron.egg-info/SOURCES.txt' 2019-10-17T18:02:46 reading manifest file 'pip-egg-info/dnacauldron.egg-info/SOURCES.txt' 2019-10-17T18:02:46 reading manifest template 'MANIFEST.in' 2019-10-17T18:02:46 warning: no files found matching '*.txt' under directory 'examples' 2019-10-17T18:02:46 writing manifest file 'pip-egg-info/dnacauldron.egg-info/SOURCES.txt' 2019-10-17T18:02:46 Source in /tmp/pip-wheel-4f25hr6f/dnacauldron has version 1.1.0, which satisfies requirement dnacauldron==1.1.0 from https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz#sha256=8ff4fca281ec212b88d18ecbb795d31a43ae6d4083cb7bca6f2dc118142ff036 2019-10-17T18:02:46 Removed dnacauldron==1.1.0 from https://files.pythonhosted.org/packages/97/55/ca0d1dee261c8a1e8757dcd4ed3fc21473eead82b2181921a9d012dee277/dnacauldron-1.1.0.tar.gz#sha256=8ff4fca281ec212b88d18ecbb795d31a43ae6d4083cb7bca6f2dc118142ff036 from build tracker '/tmp/pip-req-tracker-g3f9ninp' 2019-10-17T18:02:46 Building wheels for collected packages: dnacauldron 2019-10-17T18:02:46 Created temporary directory: /tmp/pip-wheel-opp1jx4z 2019-10-17T18:02:46 Building wheel for dnacauldron (setup.py): started 2019-10-17T18:02:46 Destination directory: /tmp/pip-wheel-opp1jx4z 2019-10-17T18:02:46 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-4f25hr6f/dnacauldron/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-opp1jx4z 2019-10-17T18:02:48 running bdist_wheel 2019-10-17T18:02:48 running build 2019-10-17T18:02:48 running build_py 2019-10-17T18:02:48 creating build 2019-10-17T18:02:48 creating build/lib 2019-10-17T18:02:48 creating build/lib/dnacauldron 2019-10-17T18:02:48 copying dnacauldron/version.py -> build/lib/dnacauldron 2019-10-17T18:02:48 copying dnacauldron/tools.py -> build/lib/dnacauldron 2019-10-17T18:02:48 copying dnacauldron/__init__.py -> build/lib/dnacauldron 2019-10-17T18:02:48 creating build/lib/dnacauldron/utils 2019-10-17T18:02:48 copying dnacauldron/utils/insert_parts_on_backbones.py -> build/lib/dnacauldron/utils 2019-10-17T18:02:48 copying dnacauldron/utils/utils.py -> build/lib/dnacauldron/utils 2019-10-17T18:02:48 copying dnacauldron/utils/__init__.py -> build/lib/dnacauldron/utils 2019-10-17T18:02:48 creating build/lib/dnacauldron/reports 2019-10-17T18:02:48 copying dnacauldron/reports/plots.py -> build/lib/dnacauldron/reports 2019-10-17T18:02:48 copying dnacauldron/reports/reports.py -> build/lib/dnacauldron/reports 2019-10-17T18:02:48 copying dnacauldron/reports/__init__.py -> build/lib/dnacauldron/reports 2019-10-17T18:02:48 creating build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/FragmentsChain.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/AssemblyMix.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/Filter.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/GibsonAssemblyMix.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/BASICLigationMix.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/RestrictionLigationMix.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying dnacauldron/AssemblyMix/__init__.py -> build/lib/dnacauldron/AssemblyMix 2019-10-17T18:02:48 creating build/lib/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying dnacauldron/StickyEndsSeq/StickyEndsSeqRecord.py -> build/lib/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying dnacauldron/StickyEndsSeq/StickyEnd.py -> build/lib/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying dnacauldron/StickyEndsSeq/StickyEndsSeq.py -> build/lib/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying dnacauldron/StickyEndsSeq/__init__.py -> build/lib/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 installing to build/bdist.linux-armv7l/wheel 2019-10-17T18:02:48 running install 2019-10-17T18:02:48 running install_lib 2019-10-17T18:02:48 creating build/bdist.linux-armv7l 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel/dnacauldron 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel/dnacauldron/utils 2019-10-17T18:02:48 copying build/lib/dnacauldron/utils/insert_parts_on_backbones.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2019-10-17T18:02:48 copying build/lib/dnacauldron/utils/utils.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2019-10-17T18:02:48 copying build/lib/dnacauldron/utils/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/utils 2019-10-17T18:02:48 copying build/lib/dnacauldron/version.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel/dnacauldron/reports 2019-10-17T18:02:48 copying build/lib/dnacauldron/reports/plots.py -> build/bdist.linux-armv7l/wheel/dnacauldron/reports 2019-10-17T18:02:48 copying build/lib/dnacauldron/reports/reports.py -> build/bdist.linux-armv7l/wheel/dnacauldron/reports 2019-10-17T18:02:48 copying build/lib/dnacauldron/reports/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/reports 2019-10-17T18:02:48 copying build/lib/dnacauldron/tools.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/FragmentsChain.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/AssemblyMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/Filter.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/GibsonAssemblyMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/BASICLigationMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/RestrictionLigationMix.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 copying build/lib/dnacauldron/AssemblyMix/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/AssemblyMix 2019-10-17T18:02:48 creating build/bdist.linux-armv7l/wheel/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying build/lib/dnacauldron/StickyEndsSeq/StickyEndsSeqRecord.py -> build/bdist.linux-armv7l/wheel/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying build/lib/dnacauldron/StickyEndsSeq/StickyEnd.py -> build/bdist.linux-armv7l/wheel/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying build/lib/dnacauldron/StickyEndsSeq/StickyEndsSeq.py -> build/bdist.linux-armv7l/wheel/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying build/lib/dnacauldron/StickyEndsSeq/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron/StickyEndsSeq 2019-10-17T18:02:48 copying build/lib/dnacauldron/__init__.py -> build/bdist.linux-armv7l/wheel/dnacauldron 2019-10-17T18:02:48 running install_egg_info 2019-10-17T18:02:49 running egg_info 2019-10-17T18:02:49 writing dnacauldron.egg-info/PKG-INFO 2019-10-17T18:02:49 writing dependency_links to dnacauldron.egg-info/dependency_links.txt 2019-10-17T18:02:49 writing requirements to dnacauldron.egg-info/requires.txt 2019-10-17T18:02:49 writing top-level names to dnacauldron.egg-info/top_level.txt 2019-10-17T18:02:49 reading manifest file 'dnacauldron.egg-info/SOURCES.txt' 2019-10-17T18:02:49 reading manifest template 'MANIFEST.in' 2019-10-17T18:02:49 warning: no files found matching '*.txt' under directory 'examples' 2019-10-17T18:02:49 writing manifest file 'dnacauldron.egg-info/SOURCES.txt' 2019-10-17T18:02:49 Copying dnacauldron.egg-info to build/bdist.linux-armv7l/wheel/dnacauldron-1.1.0-py3.5.egg-info 2019-10-17T18:02:49 running install_scripts 2019-10-17T18:02:49 creating build/bdist.linux-armv7l/wheel/dnacauldron-1.1.0.dist-info/WHEEL 2019-10-17T18:02:49 Building wheel for dnacauldron (setup.py): finished with status 'done' 2019-10-17T18:02:49 Stored in directory: /tmp/tmpaaq9kzgj 2019-10-17T18:02:49 Successfully built dnacauldron 2019-10-17T18:02:49 Cleaning up... 2019-10-17T18:02:49 Removing source in /tmp/pip-wheel-4f25hr6f/dnacauldron 2019-10-17T18:02:49 Removed build tracker '/tmp/pip-req-tracker-g3f9ninp'