2019-10-19T01:57:44 Created temporary directory: /tmp/pip-ephem-wheel-cache-fzqn6i7a 2019-10-19T01:57:44 Created temporary directory: /tmp/pip-req-tracker-ly532t1j 2019-10-19T01:57:44 Created requirements tracker '/tmp/pip-req-tracker-ly532t1j' 2019-10-19T01:57:44 Created temporary directory: /tmp/pip-wheel-7kespr22 2019-10-19T01:57:44 Collecting rcsb.exdb==0.23 2019-10-19T01:57:44 1 location(s) to search for versions of rcsb.exdb: 2019-10-19T01:57:44 * https://pypi.org/simple/rcsb-exdb/ 2019-10-19T01:57:44 Getting page https://pypi.org/simple/rcsb-exdb/ 2019-10-19T01:57:44 Analyzing links from page https://pypi.org/simple/rcsb-exdb/ 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/2a/f6/c272e3a39c603fc2bdf78edc91d3a6056f471a5c66479355c17afb893f8e/rcsb.exdb-0.14-py2.py3-none-any.whl#sha256=bc785d883d7bd02e5ba7682bc9174f1220c03de11fe29759815ac8c77356be93 (from https://pypi.org/simple/rcsb-exdb/), version: 0.14 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/4f/27/45559ce42d4dca34b32ee6e4c7bb4ff166070974082a66b8c5ca5786eba7/rcsb.exdb-0.14.tar.gz#sha256=d6e1a912cda7168eca97cae6dd56d002f7f422efbbe2fa89e2286a302177405a (from https://pypi.org/simple/rcsb-exdb/), version: 0.14 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/22/fd/bb5e00835d980568f90e999d1292796acc4a95943e86acfe47308d3f705e/rcsb.exdb-0.15.tar.gz#sha256=0214f6967aa0d3d667114dde904be917a7c6e3893b7c66963dc89bc33d3a37c1 (from https://pypi.org/simple/rcsb-exdb/), version: 0.15 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/1d/92/77ade5a4e13eb89c15fb04d7259835f44949d378814dc351774ab2ea6dec/rcsb.exdb-0.18.tar.gz#sha256=41aec36c8f147ed955fa0a2b521cf774895a919b88580c88550128496acb835d (from https://pypi.org/simple/rcsb-exdb/), version: 0.18 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/56/e2/dba667072a0dc090322f6b4f98a2a6bafef6d667d2ed5dd453848f085175/rcsb.exdb-0.19.tar.gz#sha256=1b9ae7e98c572045964a9eda5ec8a76613ecc8f6519e6edbd46626d7355d4b02 (from https://pypi.org/simple/rcsb-exdb/), version: 0.19 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/12/e8/35aeca283b264d96d445b9e1768bd115538100478e93b6e3a2427101ba4e/rcsb.exdb-0.22.tar.gz#sha256=aa25e4891468d46a21f48f20f46b00e3a3cf7654e4bb769bb0a6cf9ac4c13cb9 (from https://pypi.org/simple/rcsb-exdb/), version: 0.22 2019-10-19T01:57:45 Found link https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab (from https://pypi.org/simple/rcsb-exdb/), version: 0.23 2019-10-19T01:57:45 Using version 0.23 (newest of versions: 0.23) 2019-10-19T01:57:45 Created temporary directory: /tmp/pip-unpack-0zxd2yzz 2019-10-19T01:57:45 Downloading https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz 2019-10-19T01:57:45 Downloading from URL https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab (from https://pypi.org/simple/rcsb-exdb/) 2019-10-19T01:57:45 Added rcsb.exdb==0.23 from https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab to build tracker '/tmp/pip-req-tracker-ly532t1j' 2019-10-19T01:57:45 Running setup.py (path:/tmp/pip-wheel-7kespr22/rcsb.exdb/setup.py) egg_info for package rcsb.exdb 2019-10-19T01:57:45 Running command python setup.py egg_info 2019-10-19T01:57:47 running egg_info 2019-10-19T01:57:47 creating pip-egg-info/rcsb.exdb.egg-info 2019-10-19T01:57:47 writing dependency_links to pip-egg-info/rcsb.exdb.egg-info/dependency_links.txt 2019-10-19T01:57:47 writing entry points to pip-egg-info/rcsb.exdb.egg-info/entry_points.txt 2019-10-19T01:57:47 writing pip-egg-info/rcsb.exdb.egg-info/PKG-INFO 2019-10-19T01:57:47 writing top-level names to pip-egg-info/rcsb.exdb.egg-info/top_level.txt 2019-10-19T01:57:47 writing requirements to pip-egg-info/rcsb.exdb.egg-info/requires.txt 2019-10-19T01:57:47 writing manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt' 2019-10-19T01:57:47 reading manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt' 2019-10-19T01:57:47 reading manifest template 'MANIFEST.in' 2019-10-19T01:57:47 writing manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt' 2019-10-19T01:57:48 Source in /tmp/pip-wheel-7kespr22/rcsb.exdb has version 0.23, which satisfies requirement rcsb.exdb==0.23 from https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab 2019-10-19T01:57:48 Removed rcsb.exdb==0.23 from https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab from build tracker '/tmp/pip-req-tracker-ly532t1j' 2019-10-19T01:57:48 Building wheels for collected packages: rcsb.exdb 2019-10-19T01:57:48 Created temporary directory: /tmp/pip-wheel-wbf_ge32 2019-10-19T01:57:48 Building wheel for rcsb.exdb (setup.py): started 2019-10-19T01:57:48 Destination directory: /tmp/pip-wheel-wbf_ge32 2019-10-19T01:57:48 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-7kespr22/rcsb.exdb/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wbf_ge32 2019-10-19T01:57:50 running bdist_wheel 2019-10-19T01:57:50 running build 2019-10-19T01:57:50 running build_py 2019-10-19T01:57:50 creating build 2019-10-19T01:57:50 creating build/lib 2019-10-19T01:57:50 creating build/lib/rcsb 2019-10-19T01:57:50 copying rcsb/__init__.py -> build/lib/rcsb 2019-10-19T01:57:50 creating build/lib/rcsb/exdb 2019-10-19T01:57:50 copying rcsb/exdb/__init__.py -> build/lib/rcsb/exdb 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/seq 2019-10-19T01:57:50 copying rcsb/exdb/seq/ReferenceSequenceAssignmentAdapter.py -> build/lib/rcsb/exdb/seq 2019-10-19T01:57:50 copying rcsb/exdb/seq/TaxonomyExtractor.py -> build/lib/rcsb/exdb/seq 2019-10-19T01:57:50 copying rcsb/exdb/seq/ReferenceSequenceAssignmentProvider.py -> build/lib/rcsb/exdb/seq 2019-10-19T01:57:50 copying rcsb/exdb/seq/__init__.py -> build/lib/rcsb/exdb/seq 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 copying rcsb/exdb/utils/ObjectUpdater.py -> build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 copying rcsb/exdb/utils/ObjectAdapterBase.py -> build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 copying rcsb/exdb/utils/ObjectTransformer.py -> build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 copying rcsb/exdb/utils/ObjectExtractor.py -> build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 copying rcsb/exdb/utils/__init__.py -> build/lib/rcsb/exdb/utils 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/chemref 2019-10-19T01:57:50 copying rcsb/exdb/chemref/ChemRefEtlWorker.py -> build/lib/rcsb/exdb/chemref 2019-10-19T01:57:50 copying rcsb/exdb/chemref/ChemRefExtractor.py -> build/lib/rcsb/exdb/chemref 2019-10-19T01:57:50 copying rcsb/exdb/chemref/__init__.py -> build/lib/rcsb/exdb/chemref 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/tree 2019-10-19T01:57:50 copying rcsb/exdb/tree/TreeNodeListWorker.py -> build/lib/rcsb/exdb/tree 2019-10-19T01:57:50 copying rcsb/exdb/tree/__init__.py -> build/lib/rcsb/exdb/tree 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/cli 2019-10-19T01:57:50 copying rcsb/exdb/cli/__init__.py -> build/lib/rcsb/exdb/cli 2019-10-19T01:57:50 copying rcsb/exdb/cli/ExDbExec.py -> build/lib/rcsb/exdb/cli 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testObjectTransformer.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/fixturePdbxLoader.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testObjectExtractor.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testReferenceSequenceAssignmentAdapter.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testCitationUtils.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testReferenceSequenceAssignmentProvider.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testTreeNodeListWorker.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testObjectUpdater.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testTaxonomyExtractor.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testChemRefLoader.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/fixtureDictMethodResourceProvider.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/testCitationExtractor.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 copying rcsb/exdb/tests/__init__.py -> build/lib/rcsb/exdb/tests 2019-10-19T01:57:50 creating build/lib/rcsb/exdb/citation 2019-10-19T01:57:50 copying rcsb/exdb/citation/CitationExtractor.py -> build/lib/rcsb/exdb/citation 2019-10-19T01:57:50 copying rcsb/exdb/citation/CitationUtils.py -> build/lib/rcsb/exdb/citation 2019-10-19T01:57:50 copying rcsb/exdb/citation/__init__.py -> build/lib/rcsb/exdb/citation 2019-10-19T01:57:50 installing to build/bdist.linux-armv7l/wheel 2019-10-19T01:57:50 running install 2019-10-19T01:57:50 running install_lib 2019-10-19T01:57:50 creating build/bdist.linux-armv7l 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/seq 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/seq/ReferenceSequenceAssignmentAdapter.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/seq/TaxonomyExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/seq/ReferenceSequenceAssignmentProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/seq/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/utils/ObjectUpdater.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/utils/ObjectAdapterBase.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/utils/ObjectTransformer.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/utils/ObjectExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/chemref/ChemRefEtlWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/chemref/ChemRefExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/tree 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tree/TreeNodeListWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tree 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tree/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tree 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/cli 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/cli 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/cli/ExDbExec.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/cli 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testObjectTransformer.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/fixturePdbxLoader.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testObjectExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testReferenceSequenceAssignmentAdapter.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testCitationUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testReferenceSequenceAssignmentProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testTreeNodeListWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testObjectUpdater.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testTaxonomyExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testChemRefLoader.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/fixtureDictMethodResourceProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/testCitationExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/tests/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests 2019-10-19T01:57:50 creating build/bdist.linux-armv7l/wheel/rcsb/exdb/citation 2019-10-19T01:57:50 copying build/lib/rcsb/exdb/citation/CitationExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation 2019-10-19T01:57:51 copying build/lib/rcsb/exdb/citation/CitationUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation 2019-10-19T01:57:51 copying build/lib/rcsb/exdb/citation/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation 2019-10-19T01:57:51 copying build/lib/rcsb/exdb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb 2019-10-19T01:57:51 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb 2019-10-19T01:57:51 running install_egg_info 2019-10-19T01:57:51 running egg_info 2019-10-19T01:57:51 writing rcsb.exdb.egg-info/PKG-INFO 2019-10-19T01:57:51 writing top-level names to rcsb.exdb.egg-info/top_level.txt 2019-10-19T01:57:51 writing entry points to rcsb.exdb.egg-info/entry_points.txt 2019-10-19T01:57:51 writing dependency_links to rcsb.exdb.egg-info/dependency_links.txt 2019-10-19T01:57:51 writing requirements to rcsb.exdb.egg-info/requires.txt 2019-10-19T01:57:51 reading manifest file 'rcsb.exdb.egg-info/SOURCES.txt' 2019-10-19T01:57:51 reading manifest template 'MANIFEST.in' 2019-10-19T01:57:51 writing manifest file 'rcsb.exdb.egg-info/SOURCES.txt' 2019-10-19T01:57:51 Copying rcsb.exdb.egg-info to build/bdist.linux-armv7l/wheel/rcsb.exdb-0.23-py3.5.egg-info 2019-10-19T01:57:51 running install_scripts 2019-10-19T01:57:51 creating build/bdist.linux-armv7l/wheel/rcsb.exdb-0.23.dist-info/WHEEL 2019-10-19T01:57:51 Building wheel for rcsb.exdb (setup.py): finished with status 'done' 2019-10-19T01:57:51 Stored in directory: /tmp/tmpadf0iqfo 2019-10-19T01:57:51 Successfully built rcsb.exdb 2019-10-19T01:57:51 Cleaning up... 2019-10-19T01:57:51 Removing source in /tmp/pip-wheel-7kespr22/rcsb.exdb 2019-10-19T01:57:51 Removed build tracker '/tmp/pip-req-tracker-ly532t1j'