2019-10-20T17:11:01 Created temporary directory: /tmp/pip-ephem-wheel-cache-yht8ikq_
2019-10-20T17:11:01 Created temporary directory: /tmp/pip-req-tracker-thggyp9x
2019-10-20T17:11:01 Created requirements tracker '/tmp/pip-req-tracker-thggyp9x'
2019-10-20T17:11:01 Created temporary directory: /tmp/pip-wheel-l6hvq7j0
2019-10-20T17:11:01 Collecting rcsb.exdb==0.25
2019-10-20T17:11:01   1 location(s) to search for versions of rcsb.exdb:
2019-10-20T17:11:01   * https://pypi.org/simple/rcsb-exdb/
2019-10-20T17:11:01   Getting page https://pypi.org/simple/rcsb-exdb/
2019-10-20T17:11:02   Analyzing links from page https://pypi.org/simple/rcsb-exdb/
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/2a/f6/c272e3a39c603fc2bdf78edc91d3a6056f471a5c66479355c17afb893f8e/rcsb.exdb-0.14-py2.py3-none-any.whl#sha256=bc785d883d7bd02e5ba7682bc9174f1220c03de11fe29759815ac8c77356be93 (from https://pypi.org/simple/rcsb-exdb/), version: 0.14
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/4f/27/45559ce42d4dca34b32ee6e4c7bb4ff166070974082a66b8c5ca5786eba7/rcsb.exdb-0.14.tar.gz#sha256=d6e1a912cda7168eca97cae6dd56d002f7f422efbbe2fa89e2286a302177405a (from https://pypi.org/simple/rcsb-exdb/), version: 0.14
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/22/fd/bb5e00835d980568f90e999d1292796acc4a95943e86acfe47308d3f705e/rcsb.exdb-0.15.tar.gz#sha256=0214f6967aa0d3d667114dde904be917a7c6e3893b7c66963dc89bc33d3a37c1 (from https://pypi.org/simple/rcsb-exdb/), version: 0.15
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/1d/92/77ade5a4e13eb89c15fb04d7259835f44949d378814dc351774ab2ea6dec/rcsb.exdb-0.18.tar.gz#sha256=41aec36c8f147ed955fa0a2b521cf774895a919b88580c88550128496acb835d (from https://pypi.org/simple/rcsb-exdb/), version: 0.18
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/56/e2/dba667072a0dc090322f6b4f98a2a6bafef6d667d2ed5dd453848f085175/rcsb.exdb-0.19.tar.gz#sha256=1b9ae7e98c572045964a9eda5ec8a76613ecc8f6519e6edbd46626d7355d4b02 (from https://pypi.org/simple/rcsb-exdb/), version: 0.19
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/12/e8/35aeca283b264d96d445b9e1768bd115538100478e93b6e3a2427101ba4e/rcsb.exdb-0.22.tar.gz#sha256=aa25e4891468d46a21f48f20f46b00e3a3cf7654e4bb769bb0a6cf9ac4c13cb9 (from https://pypi.org/simple/rcsb-exdb/), version: 0.22
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/46/58/f6d9e449ab090ea202958358f51971f150ebe6064b2482a5894b47665415/rcsb.exdb-0.23.tar.gz#sha256=ddedde8359f12717ac5b34c0e11ac4bb4ce9edd3d88eca879f5657e4ff4e03ab (from https://pypi.org/simple/rcsb-exdb/), version: 0.23
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/14/2d/24a45dd6fb8ba51d2445929227949bd50c74122c3ce7cd30145adee625fe/rcsb.exdb-0.24.tar.gz#sha256=78ae760d90186fe143067f9861d967da9b73894976ea01d1dd28069d0b58129a (from https://pypi.org/simple/rcsb-exdb/), version: 0.24
2019-10-20T17:11:02     Found link https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz#sha256=34e1aa922045ee937ae97835ca3464d80604135b00cc91119aa1c3d191b0a06a (from https://pypi.org/simple/rcsb-exdb/), version: 0.25
2019-10-20T17:11:02   Using version 0.25 (newest of versions: 0.25)
2019-10-20T17:11:02   Created temporary directory: /tmp/pip-unpack-mi8zo951
2019-10-20T17:11:02   Downloading https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz
2019-10-20T17:11:02   Downloading from URL https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz#sha256=34e1aa922045ee937ae97835ca3464d80604135b00cc91119aa1c3d191b0a06a (from https://pypi.org/simple/rcsb-exdb/)
2019-10-20T17:11:02   Added rcsb.exdb==0.25 from https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz#sha256=34e1aa922045ee937ae97835ca3464d80604135b00cc91119aa1c3d191b0a06a to build tracker '/tmp/pip-req-tracker-thggyp9x'
2019-10-20T17:11:02     Running setup.py (path:/tmp/pip-wheel-l6hvq7j0/rcsb.exdb/setup.py) egg_info for package rcsb.exdb
2019-10-20T17:11:02     Running command python setup.py egg_info
2019-10-20T17:11:04     running egg_info
2019-10-20T17:11:04     creating pip-egg-info/rcsb.exdb.egg-info
2019-10-20T17:11:04     writing dependency_links to pip-egg-info/rcsb.exdb.egg-info/dependency_links.txt
2019-10-20T17:11:04     writing pip-egg-info/rcsb.exdb.egg-info/PKG-INFO
2019-10-20T17:11:04     writing top-level names to pip-egg-info/rcsb.exdb.egg-info/top_level.txt
2019-10-20T17:11:04     writing entry points to pip-egg-info/rcsb.exdb.egg-info/entry_points.txt
2019-10-20T17:11:04     writing requirements to pip-egg-info/rcsb.exdb.egg-info/requires.txt
2019-10-20T17:11:04     writing manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt'
2019-10-20T17:11:05     reading manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt'
2019-10-20T17:11:05     reading manifest template 'MANIFEST.in'
2019-10-20T17:11:05     writing manifest file 'pip-egg-info/rcsb.exdb.egg-info/SOURCES.txt'
2019-10-20T17:11:05   Source in /tmp/pip-wheel-l6hvq7j0/rcsb.exdb has version 0.25, which satisfies requirement rcsb.exdb==0.25 from https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz#sha256=34e1aa922045ee937ae97835ca3464d80604135b00cc91119aa1c3d191b0a06a
2019-10-20T17:11:05   Removed rcsb.exdb==0.25 from https://files.pythonhosted.org/packages/c1/be/645512d5fd0fe429e9e1462b1f822da18ddfa3ee4ecbd1142070e9e6c2e6/rcsb.exdb-0.25.tar.gz#sha256=34e1aa922045ee937ae97835ca3464d80604135b00cc91119aa1c3d191b0a06a from build tracker '/tmp/pip-req-tracker-thggyp9x'
2019-10-20T17:11:05 Building wheels for collected packages: rcsb.exdb
2019-10-20T17:11:05   Created temporary directory: /tmp/pip-wheel-vb186mds
2019-10-20T17:11:05   Building wheel for rcsb.exdb (setup.py): started
2019-10-20T17:11:05   Destination directory: /tmp/pip-wheel-vb186mds
2019-10-20T17:11:05   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-l6hvq7j0/rcsb.exdb/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-vb186mds
2019-10-20T17:11:07   running bdist_wheel
2019-10-20T17:11:07   running build
2019-10-20T17:11:07   running build_py
2019-10-20T17:11:07   creating build
2019-10-20T17:11:07   creating build/lib
2019-10-20T17:11:07   creating build/lib/rcsb
2019-10-20T17:11:07   copying rcsb/__init__.py -> build/lib/rcsb
2019-10-20T17:11:07   creating build/lib/rcsb/exdb
2019-10-20T17:11:07   copying rcsb/exdb/__init__.py -> build/lib/rcsb/exdb
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/seq
2019-10-20T17:11:07   copying rcsb/exdb/seq/ReferenceSequenceAssignmentAdapter.py -> build/lib/rcsb/exdb/seq
2019-10-20T17:11:07   copying rcsb/exdb/seq/TaxonomyExtractor.py -> build/lib/rcsb/exdb/seq
2019-10-20T17:11:07   copying rcsb/exdb/seq/ReferenceSequenceAssignmentProvider.py -> build/lib/rcsb/exdb/seq
2019-10-20T17:11:07   copying rcsb/exdb/seq/__init__.py -> build/lib/rcsb/exdb/seq
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   copying rcsb/exdb/utils/ObjectUpdater.py -> build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   copying rcsb/exdb/utils/ObjectAdapterBase.py -> build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   copying rcsb/exdb/utils/ObjectTransformer.py -> build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   copying rcsb/exdb/utils/ObjectExtractor.py -> build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   copying rcsb/exdb/utils/__init__.py -> build/lib/rcsb/exdb/utils
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/chemref
2019-10-20T17:11:07   copying rcsb/exdb/chemref/ChemRefEtlWorker.py -> build/lib/rcsb/exdb/chemref
2019-10-20T17:11:07   copying rcsb/exdb/chemref/ChemRefExtractor.py -> build/lib/rcsb/exdb/chemref
2019-10-20T17:11:07   copying rcsb/exdb/chemref/__init__.py -> build/lib/rcsb/exdb/chemref
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/tree
2019-10-20T17:11:07   copying rcsb/exdb/tree/TreeNodeListWorker.py -> build/lib/rcsb/exdb/tree
2019-10-20T17:11:07   copying rcsb/exdb/tree/__init__.py -> build/lib/rcsb/exdb/tree
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/cli
2019-10-20T17:11:07   copying rcsb/exdb/cli/__init__.py -> build/lib/rcsb/exdb/cli
2019-10-20T17:11:07   copying rcsb/exdb/cli/ExDbExec.py -> build/lib/rcsb/exdb/cli
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testObjectTransformer.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/fixturePdbxLoader.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testObjectExtractor.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testReferenceSequenceAssignmentAdapter.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testCitationUtils.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testReferenceSequenceAssignmentProvider.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testTreeNodeListWorker.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testObjectUpdater.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testTaxonomyExtractor.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testChemRefLoader.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/fixtureDictMethodResourceProvider.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/testCitationExtractor.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   copying rcsb/exdb/tests/__init__.py -> build/lib/rcsb/exdb/tests
2019-10-20T17:11:07   creating build/lib/rcsb/exdb/citation
2019-10-20T17:11:07   copying rcsb/exdb/citation/CitationExtractor.py -> build/lib/rcsb/exdb/citation
2019-10-20T17:11:07   copying rcsb/exdb/citation/CitationUtils.py -> build/lib/rcsb/exdb/citation
2019-10-20T17:11:07   copying rcsb/exdb/citation/__init__.py -> build/lib/rcsb/exdb/citation
2019-10-20T17:11:08   installing to build/bdist.linux-armv7l/wheel
2019-10-20T17:11:08   running install
2019-10-20T17:11:08   running install_lib
2019-10-20T17:11:08   creating build/bdist.linux-armv7l
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/seq
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/seq/ReferenceSequenceAssignmentAdapter.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/seq/TaxonomyExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/seq/ReferenceSequenceAssignmentProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/seq/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/seq
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/utils/ObjectUpdater.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/utils/ObjectAdapterBase.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/utils/ObjectTransformer.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/utils/ObjectExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/utils
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/chemref/ChemRefEtlWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/chemref/ChemRefExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/chemref
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/tree
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tree/TreeNodeListWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tree
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tree/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tree
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/cli
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/cli
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/cli/ExDbExec.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/cli
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testObjectTransformer.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/fixturePdbxLoader.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testObjectExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testReferenceSequenceAssignmentAdapter.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testCitationUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testReferenceSequenceAssignmentProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testTreeNodeListWorker.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testObjectUpdater.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testTaxonomyExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testChemRefLoader.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/fixtureDictMethodResourceProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/testCitationExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/tests/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/tests
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb/exdb/citation
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/citation/CitationExtractor.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/citation/CitationUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/citation/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb/citation
2019-10-20T17:11:08   copying build/lib/rcsb/exdb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/exdb
2019-10-20T17:11:08   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2019-10-20T17:11:08   running install_egg_info
2019-10-20T17:11:08   running egg_info
2019-10-20T17:11:08   writing dependency_links to rcsb.exdb.egg-info/dependency_links.txt
2019-10-20T17:11:08   writing top-level names to rcsb.exdb.egg-info/top_level.txt
2019-10-20T17:11:08   writing requirements to rcsb.exdb.egg-info/requires.txt
2019-10-20T17:11:08   writing rcsb.exdb.egg-info/PKG-INFO
2019-10-20T17:11:08   writing entry points to rcsb.exdb.egg-info/entry_points.txt
2019-10-20T17:11:08   reading manifest file 'rcsb.exdb.egg-info/SOURCES.txt'
2019-10-20T17:11:08   reading manifest template 'MANIFEST.in'
2019-10-20T17:11:08   writing manifest file 'rcsb.exdb.egg-info/SOURCES.txt'
2019-10-20T17:11:08   Copying rcsb.exdb.egg-info to build/bdist.linux-armv7l/wheel/rcsb.exdb-0.25-py3.5.egg-info
2019-10-20T17:11:08   running install_scripts
2019-10-20T17:11:08   creating build/bdist.linux-armv7l/wheel/rcsb.exdb-0.25.dist-info/WHEEL
2019-10-20T17:11:09   Building wheel for rcsb.exdb (setup.py): finished with status 'done'
2019-10-20T17:11:09   Stored in directory: /tmp/tmpe3vnjy0r
2019-10-20T17:11:09 Successfully built rcsb.exdb
2019-10-20T17:11:09 Cleaning up...
2019-10-20T17:11:09   Removing source in /tmp/pip-wheel-l6hvq7j0/rcsb.exdb
2019-10-20T17:11:09 Removed build tracker '/tmp/pip-req-tracker-thggyp9x'