2019-10-21T02:38:54 Created temporary directory: /tmp/pip-ephem-wheel-cache-mju4lim2 2019-10-21T02:38:54 Created temporary directory: /tmp/pip-req-tracker-5ayrkj5v 2019-10-21T02:38:54 Created requirements tracker '/tmp/pip-req-tracker-5ayrkj5v' 2019-10-21T02:38:54 Created temporary directory: /tmp/pip-wheel-i2shs27n 2019-10-21T02:38:54 Collecting mrsimulator==0.1.3 2019-10-21T02:38:54 1 location(s) to search for versions of mrsimulator: 2019-10-21T02:38:54 * https://pypi.org/simple/mrsimulator/ 2019-10-21T02:38:54 Getting page https://pypi.org/simple/mrsimulator/ 2019-10-21T02:38:54 Analyzing links from page https://pypi.org/simple/mrsimulator/ 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/3e/96/f694a7465d2a194af7b1c9df5eb93ae1caf1568605d2feee441f052a4cf9/mrsimulator-0.1.2-cp36-cp36m-manylinux1_x86_64.whl#sha256=963fe29bf68be47763a6c9af270222ec35523f0a46f2387f70472c0954f85d0f (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/28/de/a330ed1f27e98e685da0434848c3688ced0401adb3ded320d1ee64ad5dd1/mrsimulator-0.1.2-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=81c9501b176c182db9c2bdf369900ded339c80243a8a6bb3a9ef52d3910b8ab4 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/3d/71/87788c2fa714eb18fee4d97d20c53896c2f09e382e6f82a1a8f3e088efe1/mrsimulator-0.1.2-cp37-cp37m-manylinux1_x86_64.whl#sha256=0f3db293685372ff7390877b594cdea4acc43ccd8cd6d6bbabf13f2b835a2bc2 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Found link https://files.pythonhosted.org/packages/fa/03/fe23b2828bdf43777f7531ba072215d2a3828d07aa66e09b3a3aa370a281/mrsimulator-0.1.2.tar.gz#sha256=09a642e32ca3ebdd137363d74f99de7685f06c962eb933baf68d98b4fcb0d6a9 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6), version: 0.1.2 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/38/1e/895923a38a24509d1d53375b5f4fb83cde0ac4ccbbba11fbc6efa129ac7a/mrsimulator-0.1.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=909779a84c968f5c240f1eed92a618848b1d250602fd2a5f6724cafa0540370d (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/eb/41/92dece3e2a0d4009492a4bc2d8b3eba3e84409df348370cebf88a7b98cba/mrsimulator-0.1.3-cp36-cp36m-manylinux2010_x86_64.whl#sha256=eb1c388643d94a83cb81d2dea876416af2bd3e56daa444c35ef80fa1230795d5 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/e2/5c/995414acf08f67ed69902e23eeb9d1bd92371789d355129eac51fc581b1c/mrsimulator-0.1.3-cp37-cp37m-manylinux1_x86_64.whl#sha256=845f87c136b8252f99290aae9b4446b132c10bca9c9f1ed46dd9278b7a868201 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Skipping link https://files.pythonhosted.org/packages/0d/74/cc357a744387aaf971a20630024e175c05e90c0b385052454ebc03dd42f1/mrsimulator-0.1.3-cp37-cp37m-manylinux2010_x86_64.whl#sha256=1748a2575ead049b61f4dca3538a07d7c0d81fa0185446e110179214bd444e70 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6); it is not compatible with this Python 2019-10-21T02:38:54 Found link https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz#sha256=67d389a6399a11b526b19138d0029d44ffb21bbad70dd3f7cf6f0a14ceaccad4 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6), version: 0.1.3 2019-10-21T02:38:54 Using version 0.1.3 (newest of versions: 0.1.3) 2019-10-21T02:38:54 Created temporary directory: /tmp/pip-unpack-jbxfhmw_ 2019-10-21T02:38:55 Downloading https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz (143kB) 2019-10-21T02:38:55 Downloading from URL https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz#sha256=67d389a6399a11b526b19138d0029d44ffb21bbad70dd3f7cf6f0a14ceaccad4 (from https://pypi.org/simple/mrsimulator/) (requires-python:>=3.6) 2019-10-21T02:38:55 Added mrsimulator==0.1.3 from https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz#sha256=67d389a6399a11b526b19138d0029d44ffb21bbad70dd3f7cf6f0a14ceaccad4 to build tracker '/tmp/pip-req-tracker-5ayrkj5v' 2019-10-21T02:38:55 Running setup.py (path:/tmp/pip-wheel-i2shs27n/mrsimulator/setup.py) egg_info for package mrsimulator 2019-10-21T02:38:55 Running command python setup.py egg_info 2019-10-21T02:39:05 0.1.3 2019-10-21T02:39:05 /tmp/pip-wheel-i2shs27n/mrsimulator 2019-10-21T02:39:05 ['/usr/include/x86_64-linux-gnu/', '/usr/include/', '/app/.apt/usr/include/openblas', '/usr/include/openblas', '/app/.apt/usr/include/', '/app/.apt/usr/include/x86_64-linux-gnu/', '/tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/', '/usr/lib/python3/dist-packages/numpy/core/include'] 2019-10-21T02:39:05 ['/usr/lib/x86_64-linux-gnu/', '/app/.apt/usr/lib/', '/usr/lib64/', '/usr/lib/', '/app/.apt/usr/lib64/', '/app/.apt/usr/lib/x86_64-linux-gnu/'] 2019-10-21T02:39:05 ['fftw3_threads', 'fftw3', 'openblas', 'pthread'] 2019-10-21T02:39:05 ['-g', '-O3'] 2019-10-21T02:39:05 ['-lm'] 2019-10-21T02:39:05 Compiling src/c_lib/mrmethods/nmr_methods.pyx because it changed. 2019-10-21T02:39:05 Compiling src/c_lib/test/test.pyx because it changed. 2019-10-21T02:39:05 [1/2] Cythonizing src/c_lib/mrmethods/nmr_methods.pyx 2019-10-21T02:39:05 [2/2] Cythonizing src/c_lib/test/test.pyx 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Plex/Scanners.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Plex/Actions.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/Scanning.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/Visitor.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/FlowControl.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Runtime/refnanny.pyx because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/FusedNode.py because it changed. 2019-10-21T02:39:53 Compiling /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Tempita/_tempita.py because it changed. 2019-10-21T02:39:53 [1/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/FlowControl.py 2019-10-21T02:39:53 [2/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/FusedNode.py 2019-10-21T02:39:53 [3/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/Scanning.py 2019-10-21T02:39:53 [4/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Compiler/Visitor.py 2019-10-21T02:39:53 [5/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Plex/Actions.py 2019-10-21T02:39:53 [6/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Plex/Scanners.py 2019-10-21T02:39:53 [7/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Runtime/refnanny.pyx 2019-10-21T02:39:53 [8/8] Cythonizing /tmp/easy_install-w8n9ux7z/Cython-0.29.13/Cython/Tempita/_tempita.py 2019-10-21T02:39:54 /usr/lib/python3.7/distutils/extension.py:131: UserWarning: Unknown Extension options: 'data_files' 2019-10-21T02:39:54 warnings.warn(msg) 2019-10-21T02:39:54 Unable to find pgen, not compiling formal grammar. 2019-10-21T02:39:54 warning: no files found matching 'Doc/*' 2019-10-21T02:39:54 warning: no files found matching '*.pyx' under directory 'Cython/Debugger/Tests' 2019-10-21T02:39:54 warning: no files found matching '*.pxd' under directory 'Cython/Debugger/Tests' 2019-10-21T02:39:54 warning: no files found matching '*.pxd' under directory 'Cython/Utility' 2019-10-21T02:40:06 warning: no files found matching 'pyximport/README' 2019-10-21T02:47:30 Installed /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg 2019-10-21T02:47:32 running egg_info 2019-10-21T02:47:32 creating pip-egg-info/mrsimulator.egg-info 2019-10-21T02:47:32 writing pip-egg-info/mrsimulator.egg-info/PKG-INFO 2019-10-21T02:47:32 writing dependency_links to pip-egg-info/mrsimulator.egg-info/dependency_links.txt 2019-10-21T02:47:32 writing requirements to pip-egg-info/mrsimulator.egg-info/requires.txt 2019-10-21T02:47:32 writing top-level names to pip-egg-info/mrsimulator.egg-info/top_level.txt 2019-10-21T02:47:32 writing manifest file 'pip-egg-info/mrsimulator.egg-info/SOURCES.txt' 2019-10-21T02:47:32 reading manifest file 'pip-egg-info/mrsimulator.egg-info/SOURCES.txt' 2019-10-21T02:47:32 reading manifest template 'MANIFEST.in' 2019-10-21T02:47:32 writing manifest file 'pip-egg-info/mrsimulator.egg-info/SOURCES.txt' 2019-10-21T02:47:32 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module Cython was already imported from /usr/lib/python3/dist-packages/Cython/__init__.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:32 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:32 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module cython was already imported from /usr/lib/python3/dist-packages/cython.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:32 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:33 Source in /tmp/pip-wheel-i2shs27n/mrsimulator has version 0.1.3, which satisfies requirement mrsimulator==0.1.3 from https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz#sha256=67d389a6399a11b526b19138d0029d44ffb21bbad70dd3f7cf6f0a14ceaccad4 2019-10-21T02:47:33 Removed mrsimulator==0.1.3 from https://files.pythonhosted.org/packages/bf/ef/221a5b647ee529196ee600c0afd1207cb3234144ee82ad85015d62453744/mrsimulator-0.1.3.tar.gz#sha256=67d389a6399a11b526b19138d0029d44ffb21bbad70dd3f7cf6f0a14ceaccad4 from build tracker '/tmp/pip-req-tracker-5ayrkj5v' 2019-10-21T02:47:33 Building wheels for collected packages: mrsimulator 2019-10-21T02:47:33 Created temporary directory: /tmp/pip-wheel-8wpvjfhx 2019-10-21T02:47:33 Building wheel for mrsimulator (setup.py): started 2019-10-21T02:47:33 Destination directory: /tmp/pip-wheel-8wpvjfhx 2019-10-21T02:47:33 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-i2shs27n/mrsimulator/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8wpvjfhx 2019-10-21T02:47:35 0.1.3 2019-10-21T02:47:35 /tmp/pip-wheel-i2shs27n/mrsimulator 2019-10-21T02:47:35 ['/usr/include/openblas', '/app/.apt/usr/include/', '/app/.apt/usr/include/x86_64-linux-gnu/', '/app/.apt/usr/include/openblas', '/usr/include/', '/usr/include/x86_64-linux-gnu/', '/tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/', '/usr/lib/python3/dist-packages/numpy/core/include'] 2019-10-21T02:47:35 ['/usr/lib/x86_64-linux-gnu/', '/usr/lib/', '/app/.apt/usr/lib/x86_64-linux-gnu/', '/usr/lib64/', '/app/.apt/usr/lib64/', '/app/.apt/usr/lib/'] 2019-10-21T02:47:35 ['openblas', 'fftw3_threads', 'fftw3', 'pthread'] 2019-10-21T02:47:35 ['-g', '-O3'] 2019-10-21T02:47:35 ['-lm'] 2019-10-21T02:47:35 /usr/lib/python3.7/distutils/extension.py:131: UserWarning: Unknown Extension options: 'data_files' 2019-10-21T02:47:35 warnings.warn(msg) 2019-10-21T02:47:37 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module Cython was already imported from /usr/lib/python3/dist-packages/Cython/__init__.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:37 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:37 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module cython was already imported from /usr/lib/python3/dist-packages/cython.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:37 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:37 running bdist_wheel 2019-10-21T02:47:37 running build 2019-10-21T02:47:37 running build_py 2019-10-21T02:47:37 creating build 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/tensors.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/parseable.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/site.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/miscellaneous.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/__init__.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/spectrum.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/importer.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/isotopomer.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/simulator.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 copying src/mrsimulator/unit.py -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/orientation.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/Hamiltonian.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/angular_momentum.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/utils.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/__init__.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/transition_function.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 copying src/mrsimulator/python/simulator.py -> build/lib.linux-armv7l-3.7/mrsimulator/python 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/tests 2019-10-21T02:47:37 copying src/mrsimulator/tests/test_core.py -> build/lib.linux-armv7l-3.7/mrsimulator/tests 2019-10-21T02:47:37 copying src/mrsimulator/tests/__init__.py -> build/lib.linux-armv7l-3.7/mrsimulator/tests 2019-10-21T02:47:37 copying src/mrsimulator/tests/test_parseable.py -> build/lib.linux-armv7l-3.7/mrsimulator/tests 2019-10-21T02:47:37 copying src/mrsimulator/tests/test_simulator.py -> build/lib.linux-armv7l-3.7/mrsimulator/tests 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/widgets.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/model_01.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/sidebar.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/post_simulation.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/graph.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/dimension.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/__init__.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/app.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/__main__.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/test_dash.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/toolbar.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/custom_widgets.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/navbar.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 copying src/mrsimulator/app/titlebar.py -> build/lib.linux-armv7l-3.7/mrsimulator/app 2019-10-21T02:47:37 running egg_info 2019-10-21T02:47:37 writing src/mrsimulator.egg-info/PKG-INFO 2019-10-21T02:47:37 writing dependency_links to src/mrsimulator.egg-info/dependency_links.txt 2019-10-21T02:47:37 writing requirements to src/mrsimulator.egg-info/requires.txt 2019-10-21T02:47:37 writing top-level names to src/mrsimulator.egg-info/top_level.txt 2019-10-21T02:47:37 reading manifest file 'src/mrsimulator.egg-info/SOURCES.txt' 2019-10-21T02:47:37 reading manifest template 'MANIFEST.in' 2019-10-21T02:47:37 writing manifest file 'src/mrsimulator.egg-info/SOURCES.txt' 2019-10-21T02:47:37 copying src/mrsimulator/isotope_data.json -> build/lib.linux-armv7l-3.7/mrsimulator 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/examples 2019-10-21T02:47:37 copying src/mrsimulator/examples/mas.json -> build/lib.linux-armv7l-3.7/mrsimulator/examples 2019-10-21T02:47:37 copying src/mrsimulator/examples/static.json -> build/lib.linux-armv7l-3.7/mrsimulator/examples 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/app/assets 2019-10-21T02:47:37 copying src/mrsimulator/app/assets/custom.css -> build/lib.linux-armv7l-3.7/mrsimulator/app/assets 2019-10-21T02:47:37 creating build/lib.linux-armv7l-3.7/mrsimulator/app/resource 2019-10-21T02:47:37 copying src/mrsimulator/app/resource/mrsimulator-dark-featured.png -> build/lib.linux-armv7l-3.7/mrsimulator/app/resource 2019-10-21T02:47:37 running build_ext 2019-10-21T02:47:37 building 'mrsimulator.methods' extension 2019-10-21T02:47:38 C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2019-10-21T02:47:38 creating build/temp.linux-armv7l-3.7 2019-10-21T02:47:38 creating build/temp.linux-armv7l-3.7/src 2019-10-21T02:47:38 creating build/temp.linux-armv7l-3.7/src/c_lib 2019-10-21T02:47:38 creating build/temp.linux-armv7l-3.7/src/c_lib/mrmethods 2019-10-21T02:47:38 creating build/temp.linux-armv7l-3.7/src/c_lib/lib 2019-10-21T02:47:38 compile options: '-I/usr/include/openblas -I/app/.apt/usr/include/ -I/app/.apt/usr/include/x86_64-linux-gnu/ -I/app/.apt/usr/include/openblas -I/usr/include/ -I/usr/include/x86_64-linux-gnu/ -I/tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c' 2019-10-21T02:47:38 extra options: '-g -O3' 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/lib/interpolation.c 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/lib/mrsimulator.carm-linux-gnueabihf-gcc: src/c_lib/lib/angular_momentum.c 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/mrmethods/nmr_methods.c 2019-10-21T02:47:38 src/c_lib/lib/interpolation.c:204:1: warning: multi-line comment [-Wcomment] 2019-10-21T02:47:38 // if abs(v0.x - 1) < eps and abs(v1.x - 1) < eps \ 2019-10-21T02:47:38 ^ 2019-10-21T02:47:38 In file included from src/c_lib/lib/mrsimulator.c:9: 2019-10-21T02:47:38 /tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/mrsimulator.h:21:10: fatal error: fftw3.h: No such file or directory 2019-10-21T02:47:38 #include "fftw3.h" 2019-10-21T02:47:38 ^~~~~~~~~ 2019-10-21T02:47:38 compilation terminated. 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/lib/octahedron.c 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/lib/spinning_sidebands.c 2019-10-21T02:47:38 In file included from /tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/spinning_sidebands.h:9, 2019-10-21T02:47:38 from src/c_lib/mrmethods/nmr_methods.c:671: 2019-10-21T02:47:38 /tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/mrsimulator.h:21:10: fatal error: fftw3.h: No such file or directory 2019-10-21T02:47:38 #include "fftw3.h" 2019-10-21T02:47:38 ^~~~~~~~~ 2019-10-21T02:47:38 compilation terminated. 2019-10-21T02:47:38 arm-linux-gnueabihf-gcc: src/c_lib/lib/powder_setup.c 2019-10-21T02:47:39 In file included from /tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/spinning_sidebands.h:9, 2019-10-21T02:47:39 from src/c_lib/lib/spinning_sidebands.c:10: 2019-10-21T02:47:39 /tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/mrsimulator.h:21:10: fatal error: fftw3.h: No such file or directory 2019-10-21T02:47:39 #include "fftw3.h" 2019-10-21T02:47:39 ^~~~~~~~~ 2019-10-21T02:47:39 compilation terminated. 2019-10-21T02:47:39 arm-linux-gnueabihf-gcc: src/c_lib/lib/averaging_scheme.c 2019-10-21T02:47:40 error: Command "arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/openblas -I/app/.apt/usr/include/ -I/app/.apt/usr/include/x86_64-linux-gnu/ -I/app/.apt/usr/include/openblas -I/usr/include/ -I/usr/include/x86_64-linux-gnu/ -I/tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/c_lib/lib/mrsimulator.c -o build/temp.linux-armv7l-3.7/src/c_lib/lib/mrsimulator.o -g -O3" failed with exit status 1 2019-10-21T02:47:40 Building wheel for mrsimulator (setup.py): finished with status 'error' 2019-10-21T02:47:40 ERROR: Failed building wheel for mrsimulator 2019-10-21T02:47:40 Running setup.py clean for mrsimulator 2019-10-21T02:47:40 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-i2shs27n/mrsimulator/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2019-10-21T02:47:42 0.1.3 2019-10-21T02:47:42 /tmp/pip-wheel-i2shs27n/mrsimulator 2019-10-21T02:47:42 ['/app/.apt/usr/include/', '/usr/include/', '/usr/include/x86_64-linux-gnu/', '/usr/include/openblas', '/app/.apt/usr/include/openblas', '/app/.apt/usr/include/x86_64-linux-gnu/', '/tmp/pip-wheel-i2shs27n/mrsimulator/src/c_lib/include/', '/usr/lib/python3/dist-packages/numpy/core/include'] 2019-10-21T02:47:42 ['/app/.apt/usr/lib64/', '/usr/lib64/', '/app/.apt/usr/lib/x86_64-linux-gnu/', '/app/.apt/usr/lib/', '/usr/lib/', '/usr/lib/x86_64-linux-gnu/'] 2019-10-21T02:47:42 ['openblas', 'fftw3_threads', 'fftw3', 'pthread'] 2019-10-21T02:47:42 ['-g', '-O3'] 2019-10-21T02:47:42 ['-lm'] 2019-10-21T02:47:42 /usr/lib/python3.7/distutils/extension.py:131: UserWarning: Unknown Extension options: 'data_files' 2019-10-21T02:47:42 warnings.warn(msg) 2019-10-21T02:47:44 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module Cython was already imported from /usr/lib/python3/dist-packages/Cython/__init__.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:44 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:44 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:720: UserWarning: Module cython was already imported from /usr/lib/python3/dist-packages/cython.py, but /tmp/pip-wheel-i2shs27n/mrsimulator/.eggs/Cython-0.29.13-py3.7-linux-armv7l.egg is being added to sys.path 2019-10-21T02:47:44 pkg_resources.working_set.add(dist, replace=True) 2019-10-21T02:47:44 running clean 2019-10-21T02:47:44 removing 'build/temp.linux-armv7l-3.7' (and everything under it) 2019-10-21T02:47:44 removing 'build/lib.linux-armv7l-3.7' (and everything under it) 2019-10-21T02:47:44 'build/bdist.linux-armv7l' does not exist -- can't clean it 2019-10-21T02:47:44 'build/scripts-3.7' does not exist -- can't clean it 2019-10-21T02:47:44 removing 'build' 2019-10-21T02:47:44 Failed to build mrsimulator 2019-10-21T02:47:44 Cleaning up... 2019-10-21T02:47:44 Removing source in /tmp/pip-wheel-i2shs27n/mrsimulator 2019-10-21T02:47:45 Removed build tracker '/tmp/pip-req-tracker-5ayrkj5v' 2019-10-21T02:47:45 ERROR: Failed to build one or more wheels 2019-10-21T02:47:45 Exception information: 2019-10-21T02:47:45 Traceback (most recent call last): 2019-10-21T02:47:45 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main 2019-10-21T02:47:45 status = self.run(options, args) 2019-10-21T02:47:45 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 178, in run 2019-10-21T02:47:45 "Failed to build one or more wheels" 2019-10-21T02:47:45 pip._internal.exceptions.CommandError: Failed to build one or more wheels