2019-10-25T20:32:14 Created temporary directory: /tmp/pip-ephem-wheel-cache-eo9_ut2l 2019-10-25T20:32:14 Created temporary directory: /tmp/pip-req-tracker-he51jg68 2019-10-25T20:32:14 Created requirements tracker '/tmp/pip-req-tracker-he51jg68' 2019-10-25T20:32:14 Created temporary directory: /tmp/pip-wheel-gy57h4z5 2019-10-25T20:32:14 Collecting knock-knock==0.2.1 2019-10-25T20:32:14 1 location(s) to search for versions of knock-knock: 2019-10-25T20:32:14 * https://pypi.org/simple/knock-knock/ 2019-10-25T20:32:14 Getting page https://pypi.org/simple/knock-knock/ 2019-10-25T20:32:15 Analyzing links from page https://pypi.org/simple/knock-knock/ 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/51/06/1d5d27d2097aba3c8f88290cdce0f68b0d28d5bcb5d64eaa644054e9be25/knock_knock-0.1.4.tar.gz#sha256=826d8ecdd832b969b769319ca32ed9e248860d7253e84a456b149206d664986d (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.1.4 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/4d/e9/4925fae3db58020837a72dfd442d06b3119da529b0e70f350d8b38ecbf68/knock_knock-0.1.5.tar.gz#sha256=eb722e4c6283a6a05494565a7323203e88eb61422e0331d68b7325a5c06343f9 (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.1.5 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/52/db/a12e4988424bd12b8c5e38ba1920c132cc9e5d8164aa2f497090a13a32c2/knock_knock-0.1.6.tar.gz#sha256=eeb9f9b43c25158f1d273478c0ec647b0077ce3d630a310ee10233a095aff23f (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.1.6 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/c7/71/8c2b9e6bd02d7d0343029056143b45e4adb7fe86891f04c360af39f63d42/knock_knock-0.1.7.tar.gz#sha256=41fd2a82a016997d7840564b13760775d035158fb1b2d243a02ff965a67adff4 (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.1.7 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/2a/0e/a89d2891844ada30588f575badf95716c26a9ee54e24e79eec2c9eb425dd/knock_knock-0.2.tar.gz#sha256=29ad1f18783ac8b05e35a5e0182015788ca04fe768fda3465670b741c573faaf (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.2 2019-10-25T20:32:15 Found link https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz#sha256=466250fe26904c347a64a8a2707eb8cb8c1f2184e7364ff028f4700341525f61 (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6), version: 0.2.1 2019-10-25T20:32:15 Using version 0.2.1 (newest of versions: 0.2.1) 2019-10-25T20:32:15 Created temporary directory: /tmp/pip-unpack-xishhfu3 2019-10-25T20:32:15 Downloading https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz (4.0MB) 2019-10-25T20:32:15 Downloading from URL https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz#sha256=466250fe26904c347a64a8a2707eb8cb8c1f2184e7364ff028f4700341525f61 (from https://pypi.org/simple/knock-knock/) (requires-python:>=3.6) 2019-10-25T20:32:16 Added knock-knock==0.2.1 from https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz#sha256=466250fe26904c347a64a8a2707eb8cb8c1f2184e7364ff028f4700341525f61 to build tracker '/tmp/pip-req-tracker-he51jg68' 2019-10-25T20:32:16 Running setup.py (path:/tmp/pip-wheel-gy57h4z5/knock-knock/setup.py) egg_info for package knock-knock 2019-10-25T20:32:16 Running command python setup.py egg_info 2019-10-25T20:32:18 running egg_info 2019-10-25T20:32:18 creating pip-egg-info/knock_knock.egg-info 2019-10-25T20:32:18 writing pip-egg-info/knock_knock.egg-info/PKG-INFO 2019-10-25T20:32:18 writing dependency_links to pip-egg-info/knock_knock.egg-info/dependency_links.txt 2019-10-25T20:32:18 writing requirements to pip-egg-info/knock_knock.egg-info/requires.txt 2019-10-25T20:32:18 writing top-level names to pip-egg-info/knock_knock.egg-info/top_level.txt 2019-10-25T20:32:18 writing manifest file 'pip-egg-info/knock_knock.egg-info/SOURCES.txt' 2019-10-25T20:32:18 reading manifest file 'pip-egg-info/knock_knock.egg-info/SOURCES.txt' 2019-10-25T20:32:18 writing manifest file 'pip-egg-info/knock_knock.egg-info/SOURCES.txt' 2019-10-25T20:32:18 Source in /tmp/pip-wheel-gy57h4z5/knock-knock has version 0.2.1, which satisfies requirement knock-knock==0.2.1 from https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz#sha256=466250fe26904c347a64a8a2707eb8cb8c1f2184e7364ff028f4700341525f61 2019-10-25T20:32:18 Removed knock-knock==0.2.1 from https://files.pythonhosted.org/packages/1e/77/86a1a3047b15380ed26ae0754cf7870a572e4893d7e359e5bf4c4b9a932f/knock_knock-0.2.1.tar.gz#sha256=466250fe26904c347a64a8a2707eb8cb8c1f2184e7364ff028f4700341525f61 from build tracker '/tmp/pip-req-tracker-he51jg68' 2019-10-25T20:32:18 Building wheels for collected packages: knock-knock 2019-10-25T20:32:18 Created temporary directory: /tmp/pip-wheel-ugb6cmp2 2019-10-25T20:32:18 Building wheel for knock-knock (setup.py): started 2019-10-25T20:32:18 Destination directory: /tmp/pip-wheel-ugb6cmp2 2019-10-25T20:32:18 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-gy57h4z5/knock-knock/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ugb6cmp2 2019-10-25T20:32:20 running bdist_wheel 2019-10-25T20:32:20 running build 2019-10-25T20:32:20 running build_py 2019-10-25T20:32:20 creating build 2019-10-25T20:32:20 creating build/lib 2019-10-25T20:32:20 creating build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/table.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/svg.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/experiment.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/build_targets.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/layout.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/target_info.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/__init__.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/visualize.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/blast.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/range_picker.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/read_outcome.py -> build/lib/knock_knock 2019-10-25T20:32:20 copying knock_knock/modal_template.tpl -> build/lib/knock_knock 2019-10-25T20:32:20 creating build/lib/knock_knock/example_data 2019-10-25T20:32:20 creating build/lib/knock_knock/example_data/data 2019-10-25T20:32:20 creating build/lib/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying knock_knock/example_data/data/pacbio/RAB11A_PCR.fastq.gz -> build/lib/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying knock_knock/example_data/data/pacbio/RAB11A_plasmid.fastq.gz -> build/lib/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying knock_knock/example_data/data/pacbio/sample_sheet.csv -> build/lib/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 creating build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying knock_knock/example_data/data/illumina/BCAP31_ultramer_R1.fastq.gz -> build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying knock_knock/example_data/data/illumina/CLTA_PCR_R2.fastq.gz -> build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying knock_knock/example_data/data/illumina/BCAP31_ultramer_R2.fastq.gz -> build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying knock_knock/example_data/data/illumina/sample_sheet.csv -> build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying knock_knock/example_data/data/illumina/CLTA_PCR_R1.fastq.gz -> build/lib/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 creating build/lib/knock_knock/example_data/targets 2019-10-25T20:32:20 copying knock_knock/example_data/targets/targets.csv -> build/lib/knock_knock/example_data/targets 2019-10-25T20:32:20 copying knock_knock/example_data/targets/donors.csv -> build/lib/knock_knock/example_data/targets 2019-10-25T20:32:20 copying knock_knock/example_data/targets/sgRNAs.csv -> build/lib/knock_knock/example_data/targets 2019-10-25T20:32:20 copying knock_knock/example_data/targets/amplicon_primers.csv -> build/lib/knock_knock/example_data/targets 2019-10-25T20:32:20 running build_scripts 2019-10-25T20:32:20 creating build/scripts-3.7 2019-10-25T20:32:20 copying and adjusting knock_knock/knock-knock -> build/scripts-3.7 2019-10-25T20:32:20 changing mode of build/scripts-3.7/knock-knock from 644 to 755 2019-10-25T20:32:20 installing to build/bdist.linux-armv7l/wheel 2019-10-25T20:32:20 running install 2019-10-25T20:32:20 running install_lib 2019-10-25T20:32:20 creating build/bdist.linux-armv7l 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/table.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/modal_template.tpl -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/svg.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/experiment.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/build_targets.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/layout.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/target_info.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/__init__.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/visualize.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/blast.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/range_picker.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 copying build/lib/knock_knock/read_outcome.py -> build/bdist.linux-armv7l/wheel/knock_knock 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock/example_data 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock/example_data/targets 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/targets/targets.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/targets 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/targets/donors.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/targets 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/targets/sgRNAs.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/targets 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/targets/amplicon_primers.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/targets 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock/example_data/data 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/pacbio/RAB11A_PCR.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/pacbio/RAB11A_plasmid.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/pacbio/sample_sheet.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/pacbio 2019-10-25T20:32:20 creating build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/illumina/BCAP31_ultramer_R1.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/illumina/CLTA_PCR_R2.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:20 copying build/lib/knock_knock/example_data/data/illumina/BCAP31_ultramer_R2.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:21 copying build/lib/knock_knock/example_data/data/illumina/sample_sheet.csv -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:21 copying build/lib/knock_knock/example_data/data/illumina/CLTA_PCR_R1.fastq.gz -> build/bdist.linux-armv7l/wheel/knock_knock/example_data/data/illumina 2019-10-25T20:32:21 running install_egg_info 2019-10-25T20:32:21 running egg_info 2019-10-25T20:32:21 writing knock_knock.egg-info/PKG-INFO 2019-10-25T20:32:21 writing dependency_links to knock_knock.egg-info/dependency_links.txt 2019-10-25T20:32:21 writing requirements to knock_knock.egg-info/requires.txt 2019-10-25T20:32:21 writing top-level names to knock_knock.egg-info/top_level.txt 2019-10-25T20:32:21 reading manifest file 'knock_knock.egg-info/SOURCES.txt' 2019-10-25T20:32:21 writing manifest file 'knock_knock.egg-info/SOURCES.txt' 2019-10-25T20:32:21 Copying knock_knock.egg-info to build/bdist.linux-armv7l/wheel/knock_knock-0.2.1-py3.7.egg-info 2019-10-25T20:32:21 running install_scripts 2019-10-25T20:32:21 creating build/bdist.linux-armv7l/wheel/knock_knock-0.2.1.data 2019-10-25T20:32:21 creating build/bdist.linux-armv7l/wheel/knock_knock-0.2.1.data/scripts 2019-10-25T20:32:21 copying build/scripts-3.7/knock-knock -> build/bdist.linux-armv7l/wheel/knock_knock-0.2.1.data/scripts 2019-10-25T20:32:21 changing mode of build/bdist.linux-armv7l/wheel/knock_knock-0.2.1.data/scripts/knock-knock to 755 2019-10-25T20:32:21 creating build/bdist.linux-armv7l/wheel/knock_knock-0.2.1.dist-info/WHEEL 2019-10-25T20:32:21 creating '/tmp/pip-wheel-ugb6cmp2/knock_knock-0.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-10-25T20:32:21 adding 'knock_knock/__init__.py' 2019-10-25T20:32:21 adding 'knock_knock/blast.py' 2019-10-25T20:32:21 adding 'knock_knock/build_targets.py' 2019-10-25T20:32:21 adding 'knock_knock/experiment.py' 2019-10-25T20:32:21 adding 'knock_knock/layout.py' 2019-10-25T20:32:21 adding 'knock_knock/modal_template.tpl' 2019-10-25T20:32:21 adding 'knock_knock/range_picker.py' 2019-10-25T20:32:21 adding 'knock_knock/read_outcome.py' 2019-10-25T20:32:21 adding 'knock_knock/svg.py' 2019-10-25T20:32:21 adding 'knock_knock/table.py' 2019-10-25T20:32:21 adding 'knock_knock/target_info.py' 2019-10-25T20:32:21 adding 'knock_knock/visualize.py' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/illumina/BCAP31_ultramer_R1.fastq.gz' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/illumina/BCAP31_ultramer_R2.fastq.gz' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/illumina/CLTA_PCR_R1.fastq.gz' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/illumina/CLTA_PCR_R2.fastq.gz' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/illumina/sample_sheet.csv' 2019-10-25T20:32:21 adding 'knock_knock/example_data/data/pacbio/RAB11A_PCR.fastq.gz' 2019-10-25T20:32:22 adding 'knock_knock/example_data/data/pacbio/RAB11A_plasmid.fastq.gz' 2019-10-25T20:32:22 adding 'knock_knock/example_data/data/pacbio/sample_sheet.csv' 2019-10-25T20:32:22 adding 'knock_knock/example_data/targets/amplicon_primers.csv' 2019-10-25T20:32:22 adding 'knock_knock/example_data/targets/donors.csv' 2019-10-25T20:32:22 adding 'knock_knock/example_data/targets/sgRNAs.csv' 2019-10-25T20:32:22 adding 'knock_knock/example_data/targets/targets.csv' 2019-10-25T20:32:22 adding 'knock_knock-0.2.1.data/scripts/knock-knock' 2019-10-25T20:32:22 adding 'knock_knock-0.2.1.dist-info/METADATA' 2019-10-25T20:32:22 adding 'knock_knock-0.2.1.dist-info/WHEEL' 2019-10-25T20:32:22 adding 'knock_knock-0.2.1.dist-info/top_level.txt' 2019-10-25T20:32:22 adding 'knock_knock-0.2.1.dist-info/RECORD' 2019-10-25T20:32:22 removing build/bdist.linux-armv7l/wheel 2019-10-25T20:32:22 Building wheel for knock-knock (setup.py): finished with status 'done' 2019-10-25T20:32:22 Stored in directory: /tmp/tmpj0by4g3t 2019-10-25T20:32:22 Successfully built knock-knock 2019-10-25T20:32:22 Cleaning up... 2019-10-25T20:32:22 Removing source in /tmp/pip-wheel-gy57h4z5/knock-knock 2019-10-25T20:32:22 Removed build tracker '/tmp/pip-req-tracker-he51jg68'