2019-11-08T16:11:27 Created temporary directory: /tmp/pip-ephem-wheel-cache-l713_cjl
2019-11-08T16:11:27 Created temporary directory: /tmp/pip-req-tracker-mu6fonqn
2019-11-08T16:11:27 Created requirements tracker '/tmp/pip-req-tracker-mu6fonqn'
2019-11-08T16:11:27 Created temporary directory: /tmp/pip-wheel-yfywo0u_
2019-11-08T16:11:27 Collecting RouToolPa==0.82
2019-11-08T16:11:27   1 location(s) to search for versions of RouToolPa:
2019-11-08T16:11:27   * https://pypi.org/simple/routoolpa/
2019-11-08T16:11:27   Getting page https://pypi.org/simple/routoolpa/
2019-11-08T16:11:27   Analyzing links from page https://pypi.org/simple/routoolpa/
2019-11-08T16:11:27     Found link https://files.pythonhosted.org/packages/25/2a/d654c1f3fba268cfeb0d01f93a9738f392a5be2d4b6c150dd45df123299b/RouToolPa-0.80.tar.gz#sha256=667d3b75011c9c2f73c9431785c187868b3150ba886934f29b77f780361230c3 (from https://pypi.org/simple/routoolpa/), version: 0.80
2019-11-08T16:11:27     Found link https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz#sha256=bab9660e0d3040ddf32c19747a518573f586c9629777c3b09c4fac4b9dd3a8c4 (from https://pypi.org/simple/routoolpa/), version: 0.82
2019-11-08T16:11:27   Using version 0.82 (newest of versions: 0.82)
2019-11-08T16:11:27   Created temporary directory: /tmp/pip-unpack-duln5n0l
2019-11-08T16:11:28   Downloading https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz (335kB)
2019-11-08T16:11:28   Downloading from URL https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz#sha256=bab9660e0d3040ddf32c19747a518573f586c9629777c3b09c4fac4b9dd3a8c4 (from https://pypi.org/simple/routoolpa/)
2019-11-08T16:11:29   Added RouToolPa==0.82 from https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz#sha256=bab9660e0d3040ddf32c19747a518573f586c9629777c3b09c4fac4b9dd3a8c4 to build tracker '/tmp/pip-req-tracker-mu6fonqn'
2019-11-08T16:11:29     Running setup.py (path:/tmp/pip-wheel-yfywo0u_/RouToolPa/setup.py) egg_info for package RouToolPa
2019-11-08T16:11:29     Running command python setup.py egg_info
2019-11-08T16:11:31     running egg_info
2019-11-08T16:11:31     creating pip-egg-info/RouToolPa.egg-info
2019-11-08T16:11:31     writing top-level names to pip-egg-info/RouToolPa.egg-info/top_level.txt
2019-11-08T16:11:31     writing pip-egg-info/RouToolPa.egg-info/PKG-INFO
2019-11-08T16:11:31     writing dependency_links to pip-egg-info/RouToolPa.egg-info/dependency_links.txt
2019-11-08T16:11:31     writing requirements to pip-egg-info/RouToolPa.egg-info/requires.txt
2019-11-08T16:11:31     writing manifest file 'pip-egg-info/RouToolPa.egg-info/SOURCES.txt'
2019-11-08T16:11:32     reading manifest file 'pip-egg-info/RouToolPa.egg-info/SOURCES.txt'
2019-11-08T16:11:32     writing manifest file 'pip-egg-info/RouToolPa.egg-info/SOURCES.txt'
2019-11-08T16:11:32   Source in /tmp/pip-wheel-yfywo0u_/RouToolPa has version 0.82, which satisfies requirement RouToolPa==0.82 from https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz#sha256=bab9660e0d3040ddf32c19747a518573f586c9629777c3b09c4fac4b9dd3a8c4
2019-11-08T16:11:32   Removed RouToolPa==0.82 from https://files.pythonhosted.org/packages/ff/1e/893e5d09013dbd46bafa9e83d49c5cca34b285ad698d1f75bc452ab3ac64/RouToolPa-0.82.tar.gz#sha256=bab9660e0d3040ddf32c19747a518573f586c9629777c3b09c4fac4b9dd3a8c4 from build tracker '/tmp/pip-req-tracker-mu6fonqn'
2019-11-08T16:11:32 Building wheels for collected packages: RouToolPa
2019-11-08T16:11:32   Created temporary directory: /tmp/pip-wheel-wi7ox11p
2019-11-08T16:11:32   Building wheel for RouToolPa (setup.py): started
2019-11-08T16:11:32   Destination directory: /tmp/pip-wheel-wi7ox11p
2019-11-08T16:11:32   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-yfywo0u_/RouToolPa/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wi7ox11p
2019-11-08T16:11:34   running bdist_wheel
2019-11-08T16:11:34   running build
2019-11-08T16:11:34   running build_py
2019-11-08T16:11:34   creating build
2019-11-08T16:11:34   creating build/lib
2019-11-08T16:11:34   creating build/lib/RouToolPa
2019-11-08T16:11:34   copying RouToolPa/__init__.py -> build/lib/RouToolPa
2019-11-08T16:11:34   creating build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/File.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Drawing.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Evolution.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/TreeFam.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/MtDNA.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Ensembl.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/VCF.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/NCBI.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Project.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Tree.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Phylogenetics.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Annotations.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/EggNOG.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Fastq.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/GO.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Math.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:34   copying RouToolPa/Routines/Sequence.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/Alignment.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/MultipleAlignment.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/Expression.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/SequenceCluster.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/Primer.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/Pacbio.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/Matplotlib.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   copying RouToolPa/Routines/__init__.py -> build/lib/RouToolPa/Routines
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatSearchTools.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/AssemblyTools.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/TVC.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/Abstract.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   copying RouToolPa/Tools/__init__.py -> build/lib/RouToolPa/Tools
2019-11-08T16:11:35   creating build/lib/RouToolPa/Formats
2019-11-08T16:11:35   copying RouToolPa/Formats/VariantFormats.py -> build/lib/RouToolPa/Formats
2019-11-08T16:11:35   copying RouToolPa/Formats/AlignmentFormats.py -> build/lib/RouToolPa/Formats
2019-11-08T16:11:35   copying RouToolPa/Formats/AnnotationFormats.py -> build/lib/RouToolPa/Formats
2019-11-08T16:11:35   copying RouToolPa/Formats/__init__.py -> build/lib/RouToolPa/Formats
2019-11-08T16:11:35   creating build/lib/RouToolPa/Collections
2019-11-08T16:11:35   copying RouToolPa/Collections/__init__.py -> build/lib/RouToolPa/Collections
2019-11-08T16:11:35   copying RouToolPa/Collections/General.py -> build/lib/RouToolPa/Collections
2019-11-08T16:11:35   creating build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Barrnap.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/GFF.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/BUSCO.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/BLAST.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/LAST.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Primer3.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/CAFE.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/TRF.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Haploview.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/VCF.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/FaCut.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/GVF.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/R.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/KrATER.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/DESeq2.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Sequence.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/CCFOld.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/MultipleAlignment.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/HGMD.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Dovetail.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Coockiecutter.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Cufflinks.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/VCFOld.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/SNPeff.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/FastQC.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Abstract.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/PAML.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/Trimmomatic.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/__init__.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/PLINK.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   copying RouToolPa/Parsers/General.py -> build/lib/RouToolPa/Parsers
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatMasking/TRF.py -> build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatMasking/RepeatScout.py -> build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatMasking/RepeatMasker.py -> build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatMasking/RepeatModeler.py -> build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   copying RouToolPa/Tools/RepeatMasking/__init__.py -> build/lib/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/BLAST
2019-11-08T16:11:35   copying RouToolPa/Tools/BLAST/BLAST.py -> build/lib/RouToolPa/Tools/BLAST
2019-11-08T16:11:35   copying RouToolPa/Tools/BLAST/BLASTPlus.py -> build/lib/RouToolPa/Tools/BLAST
2019-11-08T16:11:35   copying RouToolPa/Tools/BLAST/__init__.py -> build/lib/RouToolPa/Tools/BLAST
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/EMPHF
2019-11-08T16:11:35   copying RouToolPa/Tools/EMPHF/EMPHF.py -> build/lib/RouToolPa/Tools/EMPHF
2019-11-08T16:11:35   copying RouToolPa/Tools/EMPHF/__init__.py -> build/lib/RouToolPa/Tools/EMPHF
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Kmers
2019-11-08T16:11:35   copying RouToolPa/Tools/Kmers/Jellyfish.py -> build/lib/RouToolPa/Tools/Kmers
2019-11-08T16:11:35   copying RouToolPa/Tools/Kmers/GenomeTester4.py -> build/lib/RouToolPa/Tools/Kmers
2019-11-08T16:11:35   copying RouToolPa/Tools/Kmers/__init__.py -> build/lib/RouToolPa/Tools/Kmers
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:35   copying RouToolPa/Tools/Scaffolders/SSPACE.py -> build/lib/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:35   copying RouToolPa/Tools/Scaffolders/LRNAScaffolder.py -> build/lib/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:35   copying RouToolPa/Tools/Scaffolders/__init__.py -> build/lib/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard/SortVcf.py -> build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard/CreateSequenceDictionary.py -> build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard/AddOrReplaceReadGroups.py -> build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard/MarkDuplicates.py -> build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   copying RouToolPa/Tools/Picard/__init__.py -> build/lib/RouToolPa/Tools/Picard
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Primers
2019-11-08T16:11:35   copying RouToolPa/Tools/Primers/Primer3.py -> build/lib/RouToolPa/Tools/Primers
2019-11-08T16:11:35   copying RouToolPa/Tools/Primers/__init__.py -> build/lib/RouToolPa/Tools/Primers
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/BioFormats
2019-11-08T16:11:35   copying RouToolPa/Tools/BioFormats/BioConvert.py -> build/lib/RouToolPa/Tools/BioFormats
2019-11-08T16:11:35   copying RouToolPa/Tools/BioFormats/__init__.py -> build/lib/RouToolPa/Tools/BioFormats
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/GapClosers
2019-11-08T16:11:35   copying RouToolPa/Tools/GapClosers/GapFiller.py -> build/lib/RouToolPa/Tools/GapClosers
2019-11-08T16:11:35   copying RouToolPa/Tools/GapClosers/Sealer.py -> build/lib/RouToolPa/Tools/GapClosers
2019-11-08T16:11:35   copying RouToolPa/Tools/GapClosers/__init__.py -> build/lib/RouToolPa/Tools/GapClosers
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/AIndex
2019-11-08T16:11:35   copying RouToolPa/Tools/AIndex/AIndex.py -> build/lib/RouToolPa/Tools/AIndex
2019-11-08T16:11:35   copying RouToolPa/Tools/AIndex/__init__.py -> build/lib/RouToolPa/Tools/AIndex
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Population
2019-11-08T16:11:35   copying RouToolPa/Tools/Population/PSMC.py -> build/lib/RouToolPa/Tools/Population
2019-11-08T16:11:35   copying RouToolPa/Tools/Population/__init__.py -> build/lib/RouToolPa/Tools/Population
2019-11-08T16:11:35   copying RouToolPa/Tools/Population/PLINK.py -> build/lib/RouToolPa/Tools/Population
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/CombineVariants.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/FastaAlternateReferenceMaker.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/AnalyzeCovariates.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/BaseRecalibrator.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/ValidateVariants.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/ApplyRecalibration.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/VariantFiltration.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/RealignerTargetCreator.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/HaplotypeCaller.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/VariantRecalibrator.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/UnifiedGenotyper.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/CatVariants.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/GenotypeGVCFs.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/IndelRealigner.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/PrintReads.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/Abstract.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/__init__.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   copying RouToolPa/Tools/GATK/SelectVariants.py -> build/lib/RouToolPa/Tools/GATK
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/ExaBayes.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/MrBayes.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/PartitionFinder.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/ExaML.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/RAxML.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/__init__.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   copying RouToolPa/Tools/Phylogenetics/Gblocks.py -> build/lib/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/DISCOVAR.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/Fermi.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/Spades.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/Supernova.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/BionanoSolve.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/MaSuRCA.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/PEAR.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/Platanus.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/__init__.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   copying RouToolPa/Tools/Assemblers/Quast.py -> build/lib/RouToolPa/Tools/Assemblers
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:35   copying RouToolPa/Tools/LinuxTools/CGAS.py -> build/lib/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:35   copying RouToolPa/Tools/LinuxTools/Valgrind.py -> build/lib/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:35   copying RouToolPa/Tools/LinuxTools/Download.py -> build/lib/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:35   copying RouToolPa/Tools/LinuxTools/__init__.py -> build/lib/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   copying RouToolPa/Tools/MultipleAlignment/SWAMP.py -> build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   copying RouToolPa/Tools/MultipleAlignment/GUIDANCE2.py -> build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   copying RouToolPa/Tools/MultipleAlignment/PRANK.py -> build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   copying RouToolPa/Tools/MultipleAlignment/MAFFT.py -> build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   copying RouToolPa/Tools/MultipleAlignment/__init__.py -> build/lib/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:35   copying RouToolPa/Tools/ImageMagick/Convert.py -> build/lib/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:35   copying RouToolPa/Tools/ImageMagick/__init__.py -> build/lib/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:35   creating build/lib/RouToolPa/Tools/Expression
2019-11-08T16:11:35   copying RouToolPa/Tools/Expression/Cufflinks.py -> build/lib/RouToolPa/Tools/Expression
2019-11-08T16:11:35   copying RouToolPa/Tools/Expression/__init__.py -> build/lib/RouToolPa/Tools/Expression
2019-11-08T16:11:35   copying RouToolPa/Tools/Expression/HTSeq.py -> build/lib/RouToolPa/Tools/Expression
2019-11-08T16:11:35   copying RouToolPa/Tools/Expression/Subread.py -> build/lib/RouToolPa/Tools/Expression
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Samtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Samtools/Samtools.py -> build/lib/RouToolPa/Tools/Samtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Samtools/__init__.py -> build/lib/RouToolPa/Tools/Samtools
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Evolution
2019-11-08T16:11:36   copying RouToolPa/Tools/Evolution/__init__.py -> build/lib/RouToolPa/Tools/Evolution
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Stirka
2019-11-08T16:11:36   copying RouToolPa/Tools/Stirka/Trimmer.py -> build/lib/RouToolPa/Tools/Stirka
2019-11-08T16:11:36   copying RouToolPa/Tools/Stirka/__init__.py -> build/lib/RouToolPa/Tools/Stirka
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/MaskFasta.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/GetFasta.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/Flank.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/Intersect.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/GenomeCov.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/BamToFastq.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   copying RouToolPa/Tools/Bedtools/__init__.py -> build/lib/RouToolPa/Tools/Bedtools
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/HMMER
2019-11-08T16:11:36   copying RouToolPa/Tools/HMMER/HMMER3.py -> build/lib/RouToolPa/Tools/HMMER
2019-11-08T16:11:36   copying RouToolPa/Tools/HMMER/__init__.py -> build/lib/RouToolPa/Tools/HMMER
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Clustering
2019-11-08T16:11:36   copying RouToolPa/Tools/Clustering/CDHit.py -> build/lib/RouToolPa/Tools/Clustering
2019-11-08T16:11:36   copying RouToolPa/Tools/Clustering/__init__.py -> build/lib/RouToolPa/Tools/Clustering
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/Tophat.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/Bowtie2.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/TMAP.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/STAR.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/LongRanger.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/BWA.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/Novoalign.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/BLAT.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/GEM.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   copying RouToolPa/Tools/Alignment/__init__.py -> build/lib/RouToolPa/Tools/Alignment
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:36   copying RouToolPa/Tools/SRAToolkit/FastqDump.py -> build/lib/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:36   copying RouToolPa/Tools/SRAToolkit/__init__.py -> build/lib/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/Clumpify.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/FaCut.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/NextClip.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/Adapters.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/FastQC.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/TrimGalore.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/Trimmomatic.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/__init__.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/Cutadapt.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   copying RouToolPa/Tools/Filter/Cookiecutter.py -> build/lib/RouToolPa/Tools/Filter
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/WGA
2019-11-08T16:11:36   copying RouToolPa/Tools/WGA/LAST.py -> build/lib/RouToolPa/Tools/WGA
2019-11-08T16:11:36   copying RouToolPa/Tools/WGA/__init__.py -> build/lib/RouToolPa/Tools/WGA
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/GenotypeGVCFs4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/VariantFiltration4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/FastaAlternateReferenceMaker4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/SelectVariants4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/AnalyzeCovariates4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/HaplotypeCaller4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/SortVcf4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/CombineGVCFs4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/UnifiedGenotyper.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/BaseRecalibrator4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/GenomicsDBImport4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/Abstract.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/ValidateVariants4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/__init__.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   copying RouToolPa/Tools/GATK4/CombineVariants4.py -> build/lib/RouToolPa/Tools/GATK4
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/Barrnap.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/BUSCO.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/GlimerHMM.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/Exonerate.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/VEP.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/Emapper.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/SNPeff.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/AUGUSTUS.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/__init__.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   copying RouToolPa/Tools/Annotation/TransDecoder.py -> build/lib/RouToolPa/Tools/Annotation
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/PacBio
2019-11-08T16:11:36   copying RouToolPa/Tools/PacBio/SMRTLink4.py -> build/lib/RouToolPa/Tools/PacBio
2019-11-08T16:11:36   copying RouToolPa/Tools/PacBio/__init__.py -> build/lib/RouToolPa/Tools/PacBio
2019-11-08T16:11:36   creating build/lib/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:36   copying RouToolPa/Tools/Evolution/PAML/MCMCTree.py -> build/lib/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:36   copying RouToolPa/Tools/Evolution/PAML/Codeml.py -> build/lib/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:36   copying RouToolPa/Tools/Evolution/PAML/__init__.py -> build/lib/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:36   installing to build/bdist.linux-armv7l/wheel
2019-11-08T16:11:36   running install
2019-11-08T16:11:36   running install_lib
2019-11-08T16:11:36   creating build/bdist.linux-armv7l
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/File.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Drawing.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Evolution.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/TreeFam.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/MtDNA.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Ensembl.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/VCF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/NCBI.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Project.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Tree.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Phylogenetics.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Annotations.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/EggNOG.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Fastq.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/GO.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Math.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Sequence.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Alignment.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/MultipleAlignment.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Expression.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/SequenceCluster.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Primer.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Pacbio.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/Matplotlib.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   copying build/lib/RouToolPa/Routines/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Routines
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatMasking/TRF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatMasking/RepeatScout.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatMasking/RepeatMasker.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatMasking/RepeatModeler.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatMasking/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/RepeatMasking
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/RepeatSearchTools.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BLAST
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/BLAST/BLAST.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BLAST
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/BLAST/BLASTPlus.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BLAST
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/BLAST/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BLAST
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/EMPHF
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/EMPHF/EMPHF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/EMPHF
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/EMPHF/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/EMPHF
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Kmers
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Kmers/Jellyfish.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Kmers
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Kmers/GenomeTester4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Kmers
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Kmers/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Kmers
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Scaffolders/SSPACE.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Scaffolders/LRNAScaffolder.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Scaffolders/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Scaffolders
2019-11-08T16:11:36   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:36   copying build/lib/RouToolPa/Tools/Picard/SortVcf.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Picard/CreateSequenceDictionary.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Picard/AddOrReplaceReadGroups.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Picard/MarkDuplicates.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Picard/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Picard
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Primers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Primers/Primer3.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Primers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Primers/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Primers
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BioFormats
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/BioFormats/BioConvert.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BioFormats
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/BioFormats/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/BioFormats
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GapClosers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GapClosers/GapFiller.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GapClosers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GapClosers/Sealer.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GapClosers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GapClosers/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GapClosers
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/AIndex
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/AIndex/AIndex.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/AIndex
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/AIndex/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/AIndex
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Picard.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Population
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Population/PSMC.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Population
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Population/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Population
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Population/PLINK.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Population
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/CombineVariants.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/FastaAlternateReferenceMaker.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/AnalyzeCovariates.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/BaseRecalibrator.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/ValidateVariants.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/ApplyRecalibration.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/VariantFiltration.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/RealignerTargetCreator.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/HaplotypeCaller.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/VariantRecalibrator.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/UnifiedGenotyper.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/CatVariants.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/GenotypeGVCFs.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/IndelRealigner.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/PrintReads.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/Abstract.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK/SelectVariants.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/ExaBayes.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/MrBayes.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/PartitionFinder.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/ExaML.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/RAxML.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Phylogenetics/Gblocks.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Phylogenetics
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/DISCOVAR.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/Fermi.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/Spades.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/Supernova.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/BionanoSolve.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/MaSuRCA.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/PEAR.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/Platanus.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Assemblers/Quast.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Assemblers
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/LinuxTools/CGAS.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/LinuxTools/Valgrind.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/LinuxTools/Download.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/LinuxTools/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/LinuxTools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/AssemblyTools.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/MultipleAlignment/SWAMP.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/MultipleAlignment/GUIDANCE2.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/MultipleAlignment/PRANK.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/MultipleAlignment/MAFFT.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/MultipleAlignment/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/MultipleAlignment
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/ImageMagick/Convert.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/ImageMagick/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/ImageMagick
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Expression
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Expression/Cufflinks.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Expression
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Expression/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Expression
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Expression/HTSeq.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Expression
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Expression/Subread.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Expression
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Samtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Samtools/Samtools.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Samtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Samtools/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Samtools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Evolution/PAML/MCMCTree.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Evolution/PAML/Codeml.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Evolution/PAML/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution/PAML
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Evolution/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Evolution
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Stirka
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Stirka/Trimmer.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Stirka
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Stirka/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Stirka
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/MaskFasta.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/GetFasta.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/Flank.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/Intersect.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/GenomeCov.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/BamToFastq.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Bedtools/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Bedtools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/HMMER
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/HMMER/HMMER3.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/HMMER
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/HMMER/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/HMMER
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Clustering
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Clustering/CDHit.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Clustering
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Clustering/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Clustering
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/Tophat.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/Bowtie2.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/TMAP.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/STAR.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/LongRanger.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/BWA.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/Novoalign.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/BLAT.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/GEM.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Alignment/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Alignment
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/SRAToolkit/FastqDump.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/SRAToolkit/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/SRAToolkit
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/Clumpify.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/FaCut.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/NextClip.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/Adapters.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/FastQC.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/TrimGalore.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/Trimmomatic.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/Cutadapt.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Filter/Cookiecutter.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Filter
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/TVC.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/WGA
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/WGA/LAST.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/WGA
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/WGA/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/WGA
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Abstract.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/GenotypeGVCFs4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/VariantFiltration4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/FastaAlternateReferenceMaker4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/SelectVariants4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/AnalyzeCovariates4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/HaplotypeCaller4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/SortVcf4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/CombineGVCFs4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/UnifiedGenotyper.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/BaseRecalibrator4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/GenomicsDBImport4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/Abstract.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/ValidateVariants4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/GATK4/CombineVariants4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/GATK4
2019-11-08T16:11:37   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/Barrnap.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/BUSCO.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/GlimerHMM.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/Exonerate.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/VEP.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/Emapper.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:37   copying build/lib/RouToolPa/Tools/Annotation/SNPeff.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/Annotation/AUGUSTUS.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/Annotation/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/Annotation/TransDecoder.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/Annotation
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools
2019-11-08T16:11:38   creating build/bdist.linux-armv7l/wheel/RouToolPa/Tools/PacBio
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/PacBio/SMRTLink4.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/PacBio
2019-11-08T16:11:38   copying build/lib/RouToolPa/Tools/PacBio/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Tools/PacBio
2019-11-08T16:11:38   creating build/bdist.linux-armv7l/wheel/RouToolPa/Formats
2019-11-08T16:11:38   copying build/lib/RouToolPa/Formats/VariantFormats.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Formats
2019-11-08T16:11:38   copying build/lib/RouToolPa/Formats/AlignmentFormats.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Formats
2019-11-08T16:11:38   copying build/lib/RouToolPa/Formats/AnnotationFormats.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Formats
2019-11-08T16:11:38   copying build/lib/RouToolPa/Formats/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Formats
2019-11-08T16:11:38   creating build/bdist.linux-armv7l/wheel/RouToolPa/Collections
2019-11-08T16:11:38   copying build/lib/RouToolPa/Collections/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Collections
2019-11-08T16:11:38   copying build/lib/RouToolPa/Collections/General.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Collections
2019-11-08T16:11:38   creating build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Barrnap.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/GFF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/BUSCO.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/BLAST.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/LAST.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Primer3.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/CAFE.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/TRF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Haploview.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/VCF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/FaCut.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/GVF.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/R.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/KrATER.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/DESeq2.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Sequence.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/CCFOld.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/MultipleAlignment.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/HGMD.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Dovetail.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Coockiecutter.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Cufflinks.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/VCFOld.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/SNPeff.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/FastQC.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Abstract.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/PAML.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/Trimmomatic.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/PLINK.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/Parsers/General.py -> build/bdist.linux-armv7l/wheel/RouToolPa/Parsers
2019-11-08T16:11:38   copying build/lib/RouToolPa/__init__.py -> build/bdist.linux-armv7l/wheel/RouToolPa
2019-11-08T16:11:38   running install_egg_info
2019-11-08T16:11:38   running egg_info
2019-11-08T16:11:38   writing dependency_links to RouToolPa.egg-info/dependency_links.txt
2019-11-08T16:11:38   writing requirements to RouToolPa.egg-info/requires.txt
2019-11-08T16:11:38   writing RouToolPa.egg-info/PKG-INFO
2019-11-08T16:11:38   writing top-level names to RouToolPa.egg-info/top_level.txt
2019-11-08T16:11:38   reading manifest file 'RouToolPa.egg-info/SOURCES.txt'
2019-11-08T16:11:38   writing manifest file 'RouToolPa.egg-info/SOURCES.txt'
2019-11-08T16:11:38   Copying RouToolPa.egg-info to build/bdist.linux-armv7l/wheel/RouToolPa-0.82-py3.5.egg-info
2019-11-08T16:11:38   running install_scripts
2019-11-08T16:11:38   creating build/bdist.linux-armv7l/wheel/RouToolPa-0.82.dist-info/WHEEL
2019-11-08T16:11:40   Building wheel for RouToolPa (setup.py): finished with status 'done'
2019-11-08T16:11:40   Stored in directory: /tmp/tmp2s2dfo8w
2019-11-08T16:11:40 Successfully built RouToolPa
2019-11-08T16:11:40 Cleaning up...
2019-11-08T16:11:40   Removing source in /tmp/pip-wheel-yfywo0u_/RouToolPa
2019-11-08T16:11:40 Removed build tracker '/tmp/pip-req-tracker-mu6fonqn'