2019-11-20T15:07:43 Created temporary directory: /tmp/pip-ephem-wheel-cache-ajly2ewy 2019-11-20T15:07:43 Created temporary directory: /tmp/pip-req-tracker-9vn9tfvy 2019-11-20T15:07:43 Created requirements tracker '/tmp/pip-req-tracker-9vn9tfvy' 2019-11-20T15:07:43 Created temporary directory: /tmp/pip-wheel-y3zmyf50 2019-11-20T15:07:43 Collecting camoco==0.6.4 2019-11-20T15:07:43 1 location(s) to search for versions of camoco: 2019-11-20T15:07:43 * https://pypi.org/simple/camoco/ 2019-11-20T15:07:43 Getting page https://pypi.org/simple/camoco/ 2019-11-20T15:07:44 Analyzing links from page https://pypi.org/simple/camoco/ 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/43/41/d0d81fb45e70fbeb4eecd8a45e1cf580cd00221f41110291c9d81431051f/camoco-0.1.0.tar.gz#sha256=c10fe092c2ab4d1776e387cf6a71862f0dd8f676ad4a4e5c5bc3859dbb5b43e3 (from https://pypi.org/simple/camoco/), version: 0.1.0 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/ac/2a/a2d57a86796705e676e89ba06ac5ca9d6031f8257d3d191fe1b62cb3e027/camoco-0.1.1.tar.gz#sha256=163accc022c638875f41fb78bf53081d78fb83359c770c8a5dd2fe2b4959e0bf (from https://pypi.org/simple/camoco/), version: 0.1.1 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/36/76/4ead6259156a34138d5a1470a6fffe90bf84060ecbf6ba24d35ff6444556/camoco-0.1.2.tar.gz#sha256=a48a88d15143d9167866ebdf444b7d692a840d1d739d68fe634166967be13b1f (from https://pypi.org/simple/camoco/), version: 0.1.2 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/b8/39/ef06f826443955669d6b53c265239e080a7d419ab14e479fb2f0dc30e3a0/camoco-0.1.3.tar.gz#sha256=0a459a64c1a716c96f5101de7d05844f7fd49f493cb4a0778b66d1699e888a8c (from https://pypi.org/simple/camoco/), version: 0.1.3 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/2f/89/053c4d7d7e219d10a8f79a57f55b054e3d2072597332a06dbc62f567ee59/camoco-0.1.4.tar.gz#sha256=d64e9ca46de62d0605853905db625d63d12bec82fbb9b62a489d869116786670 (from https://pypi.org/simple/camoco/), version: 0.1.4 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/1b/b1/231f9627750ca9cabee0762a3682cc2bb3f30650f6a8232d8e3af32a3823/camoco-0.1.5.tar.gz#sha256=a9b2065c30a2501d90220124cd324262e774ebb88da74d4296c67f576ee5e3f6 (from https://pypi.org/simple/camoco/), version: 0.1.5 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/fa/6e/370a6eff0d3fb9ff43b0ea5899a393ccca0773a5d0ced60193672a08ca9d/camoco-0.1.6.tar.gz#sha256=01bfad661df4b0957ef74d5f7219deea4a619a31c0f92ebcbbd5cc5f35a2f14b (from https://pypi.org/simple/camoco/), version: 0.1.6 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/cb/99/3aeb19604c709bafd7be0564423b6d56ec9dbb608f9ec763b58faedf361c/camoco-0.1.7.tar.gz#sha256=5f97b9777f530dd1020efcfbc9b95c2f04dc25ccb0eafe4b377bdc83f4637e79 (from https://pypi.org/simple/camoco/), version: 0.1.7 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/86/b9/74946b1d3f0214e451528e29131ca23b99bbe78720b9981638d20838bfeb/camoco-0.1.8.tar.gz#sha256=cafb540c7417a18ee5c34e6560c25e3cef08045cc2251f78f568423036f8513e (from https://pypi.org/simple/camoco/), version: 0.1.8 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 (from https://pypi.org/simple/camoco/), version: 0.6.0 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/89/1f/b09a750aad7666bc593123781cc284d610df777a4360f6f1bd8fb0d7ff27/camoco-0.6.1.tar.gz#sha256=82e9200793e5b5cd8fd3f359508995f6cc76fc6b964c28e75341bed1c0974caf (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.1 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.2 2019-11-20T15:07:44 The package https://files.pythonhosted.org/packages/23/0e/3616fbe340618546b8ddab8711e9f1442c2a9ff2ec315eb1cc9afd6d2123/camoco-0.6.3.tar.gz#sha256=550159a5a32949a8f28efd6d0cfde07e28859cdcd457df105a9420d2e4322fa2 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6, <3.7) is incompatible with the python version in use. Acceptable python versions are: >=3.6, <3.7 2019-11-20T15:07:44 Found link https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f (from https://pypi.org/simple/camoco/) (requires-python:>=3.6,<3.8), version: 0.6.4 2019-11-20T15:07:44 Using version 0.6.4 (newest of versions: 0.6.4) 2019-11-20T15:07:44 Created temporary directory: /tmp/pip-unpack-zgvr5m29 2019-11-20T15:07:44 Downloading https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz (100kB) 2019-11-20T15:07:44 Downloading from URL https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f (from https://pypi.org/simple/camoco/) (requires-python:>=3.6,<3.8) 2019-11-20T15:07:44 Added camoco==0.6.4 from https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f to build tracker '/tmp/pip-req-tracker-9vn9tfvy' 2019-11-20T15:07:44 Running setup.py (path:/tmp/pip-wheel-y3zmyf50/camoco/setup.py) egg_info for package camoco 2019-11-20T15:07:44 Running command python setup.py egg_info 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Plex/Scanners.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Plex/Actions.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/Scanning.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/Visitor.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/FlowControl.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Runtime/refnanny.pyx because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/FusedNode.py because it changed. 2019-11-20T15:08:34 Compiling /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Tempita/_tempita.py because it changed. 2019-11-20T15:08:34 [1/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/FlowControl.py 2019-11-20T15:08:34 [2/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/FusedNode.py 2019-11-20T15:08:34 [3/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/Scanning.py 2019-11-20T15:08:34 [4/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Compiler/Visitor.py 2019-11-20T15:08:34 [5/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Plex/Actions.py 2019-11-20T15:08:34 [6/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Plex/Scanners.py 2019-11-20T15:08:34 [7/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Runtime/refnanny.pyx 2019-11-20T15:08:34 [8/8] Cythonizing /tmp/easy_install-mg3v72p7/Cython-0.29.10/Cython/Tempita/_tempita.py 2019-11-20T15:08:35 Unable to find pgen, not compiling formal grammar. 2019-11-20T15:08:35 warning: no files found matching 'Doc/*' 2019-11-20T15:08:35 warning: no files found matching '*.pyx' under directory 'Cython/Debugger/Tests' 2019-11-20T15:08:35 warning: no files found matching '*.pxd' under directory 'Cython/Debugger/Tests' 2019-11-20T15:08:35 warning: no files found matching '*.pxd' under directory 'Cython/Utility' 2019-11-20T15:08:47 warning: no files found matching 'pyximport/README' 2019-11-20T15:15:54 Installed /tmp/pip-wheel-y3zmyf50/camoco/.eggs/Cython-0.29.10-py3.7-linux-armv7l.egg 2019-11-20T15:15:56 running egg_info 2019-11-20T15:15:56 creating pip-egg-info/camoco.egg-info 2019-11-20T15:15:56 writing pip-egg-info/camoco.egg-info/PKG-INFO 2019-11-20T15:15:56 writing dependency_links to pip-egg-info/camoco.egg-info/dependency_links.txt 2019-11-20T15:15:56 writing requirements to pip-egg-info/camoco.egg-info/requires.txt 2019-11-20T15:15:56 writing top-level names to pip-egg-info/camoco.egg-info/top_level.txt 2019-11-20T15:15:56 writing manifest file 'pip-egg-info/camoco.egg-info/SOURCES.txt' 2019-11-20T15:15:56 reading manifest file 'pip-egg-info/camoco.egg-info/SOURCES.txt' 2019-11-20T15:15:56 writing manifest file 'pip-egg-info/camoco.egg-info/SOURCES.txt' 2019-11-20T15:15:57 Source in /tmp/pip-wheel-y3zmyf50/camoco has version 0.6.4, which satisfies requirement camoco==0.6.4 from https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f 2019-11-20T15:15:57 Removed camoco==0.6.4 from https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f from build tracker '/tmp/pip-req-tracker-9vn9tfvy' 2019-11-20T15:15:57 Building wheels for collected packages: camoco 2019-11-20T15:15:57 Created temporary directory: /tmp/pip-wheel-mcde4ufr 2019-11-20T15:15:57 Building wheel for camoco (setup.py): started 2019-11-20T15:15:57 Destination directory: /tmp/pip-wheel-mcde4ufr 2019-11-20T15:15:57 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-y3zmyf50/camoco/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-mcde4ufr 2019-11-20T15:16:00 running bdist_wheel 2019-11-20T15:16:00 running build 2019-11-20T15:16:00 running build_py 2019-11-20T15:16:00 creating build 2019-11-20T15:16:00 creating build/lib.linux-armv7l-3.7 2019-11-20T15:16:00 creating build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Genome.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/COB.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Overlap.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Locus.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Term.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Chrom.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Expr.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/RefGen.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Tools.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/NetComp.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/GWAS.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Config.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Exceptions.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Ontology.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/__init__.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/Camoco.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 copying camoco/GOnt.py -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:00 creating build/lib.linux-armv7l-3.7/camoco/cli 2019-11-20T15:16:00 copying camoco/cli/__init__.py -> build/lib.linux-armv7l-3.7/camoco/cli 2019-11-20T15:16:00 creating build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/health.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/cistrans.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/remove.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/crossRef.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/snp2gene.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/build.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/simulateGWAS.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/list.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/__init__.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/Analysis.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/plotGWAS.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/locality.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 copying camoco/cli/commands/geneneighbors.py -> build/lib.linux-armv7l-3.7/camoco/cli/commands 2019-11-20T15:16:00 running egg_info 2019-11-20T15:16:00 writing camoco.egg-info/PKG-INFO 2019-11-20T15:16:00 writing dependency_links to camoco.egg-info/dependency_links.txt 2019-11-20T15:16:00 writing requirements to camoco.egg-info/requires.txt 2019-11-20T15:16:00 writing top-level names to camoco.egg-info/top_level.txt 2019-11-20T15:16:01 reading manifest file 'camoco.egg-info/SOURCES.txt' 2019-11-20T15:16:01 writing manifest file 'camoco.egg-info/SOURCES.txt' 2019-11-20T15:16:01 copying camoco/PCCUP.pyx -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:01 copying camoco/RefGenDist.pyx -> build/lib.linux-armv7l-3.7/camoco 2019-11-20T15:16:01 copying camoco/cli/camoco -> build/lib.linux-armv7l-3.7/camoco/cli 2019-11-20T15:16:01 running build_ext 2019-11-20T15:16:01 cythoning camoco/PCCUP.pyx to camoco/PCCUP.c 2019-11-20T15:16:02 /tmp/pip-wheel-y3zmyf50/camoco/.eggs/Cython-0.29.10-py3.7-linux-armv7l.egg/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-y3zmyf50/camoco/camoco/PCCUP.pyx 2019-11-20T15:16:02 tree = Parsing.p_module(s, pxd, full_module_name) 2019-11-20T15:16:09 building 'camoco.PCCUP' extension 2019-11-20T15:16:09 creating build/temp.linux-armv7l-3.7 2019-11-20T15:16:09 creating build/temp.linux-armv7l-3.7/camoco 2019-11-20T15:16:09 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c camoco/PCCUP.c -o build/temp.linux-armv7l-3.7/camoco/PCCUP.o 2019-11-20T15:16:09 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-11-20T15:16:09 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-11-20T15:16:09 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-11-20T15:16:09 from camoco/PCCUP.c:598: 2019-11-20T15:16:09 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-11-20T15:16:09 #warning "Using deprecated NumPy API, disable it with " \ 2019-11-20T15:16:09 ^~~~~~~ 2019-11-20T15:16:36 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/camoco/PCCUP.o -o build/lib.linux-armv7l-3.7/camoco/PCCUP.cpython-37m-arm-linux-gnueabihf.so 2019-11-20T15:16:36 cythoning camoco/RefGenDist.pyx to camoco/RefGenDist.c 2019-11-20T15:16:36 /tmp/pip-wheel-y3zmyf50/camoco/.eggs/Cython-0.29.10-py3.7-linux-armv7l.egg/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-y3zmyf50/camoco/camoco/RefGenDist.pyx 2019-11-20T15:16:36 tree = Parsing.p_module(s, pxd, full_module_name) 2019-11-20T15:16:41 building 'camoco.RefGenDist' extension 2019-11-20T15:16:41 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c camoco/RefGenDist.c -o build/temp.linux-armv7l-3.7/camoco/RefGenDist.o 2019-11-20T15:17:03 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/camoco/RefGenDist.o -o build/lib.linux-armv7l-3.7/camoco/RefGenDist.cpython-37m-arm-linux-gnueabihf.so 2019-11-20T15:17:03 running build_scripts 2019-11-20T15:17:03 creating build/scripts-3.7 2019-11-20T15:17:03 copying and adjusting camoco/cli/camoco -> build/scripts-3.7 2019-11-20T15:17:03 changing mode of build/scripts-3.7/camoco from 644 to 755 2019-11-20T15:17:03 installing to build/bdist.linux-armv7l/wheel 2019-11-20T15:17:03 running install 2019-11-20T15:17:03 running install_lib 2019-11-20T15:17:03 creating build/bdist.linux-armv7l 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Genome.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco/cli 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/camoco -> build/bdist.linux-armv7l/wheel/camoco/cli 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/health.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/cistrans.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/remove.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/crossRef.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/snp2gene.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/build.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/simulateGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/list.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/Analysis.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/plotGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/locality.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/commands/geneneighbors.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/cli/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/COB.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/PCCUP.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Overlap.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Locus.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/RefGenDist.pyx -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Term.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Chrom.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/PCCUP.pyx -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Expr.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/RefGen.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/RefGenDist.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Tools.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/NetComp.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/GWAS.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Config.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Exceptions.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Ontology.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/__init__.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/Camoco.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 copying build/lib.linux-armv7l-3.7/camoco/GOnt.py -> build/bdist.linux-armv7l/wheel/camoco 2019-11-20T15:17:03 running install_egg_info 2019-11-20T15:17:03 Copying camoco.egg-info to build/bdist.linux-armv7l/wheel/camoco-0.6.4-py3.7.egg-info 2019-11-20T15:17:03 running install_scripts 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco-0.6.4.data 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco-0.6.4.data/scripts 2019-11-20T15:17:03 copying build/scripts-3.7/camoco -> build/bdist.linux-armv7l/wheel/camoco-0.6.4.data/scripts 2019-11-20T15:17:03 changing mode of build/bdist.linux-armv7l/wheel/camoco-0.6.4.data/scripts/camoco to 755 2019-11-20T15:17:03 creating build/bdist.linux-armv7l/wheel/camoco-0.6.4.dist-info/WHEEL 2019-11-20T15:17:03 creating '/tmp/pip-wheel-mcde4ufr/camoco-0.6.4-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-11-20T15:17:03 adding 'camoco/COB.py' 2019-11-20T15:17:03 adding 'camoco/Camoco.py' 2019-11-20T15:17:03 adding 'camoco/Chrom.py' 2019-11-20T15:17:03 adding 'camoco/Config.py' 2019-11-20T15:17:03 adding 'camoco/Exceptions.py' 2019-11-20T15:17:03 adding 'camoco/Expr.py' 2019-11-20T15:17:03 adding 'camoco/GOnt.py' 2019-11-20T15:17:03 adding 'camoco/GWAS.py' 2019-11-20T15:17:03 adding 'camoco/Genome.py' 2019-11-20T15:17:03 adding 'camoco/Locus.py' 2019-11-20T15:17:03 adding 'camoco/NetComp.py' 2019-11-20T15:17:03 adding 'camoco/Ontology.py' 2019-11-20T15:17:03 adding 'camoco/Overlap.py' 2019-11-20T15:17:04 adding 'camoco/PCCUP.cpython-37m-arm-linux-gnueabihf.so' 2019-11-20T15:17:04 adding 'camoco/PCCUP.pyx' 2019-11-20T15:17:04 adding 'camoco/RefGen.py' 2019-11-20T15:17:04 adding 'camoco/RefGenDist.cpython-37m-arm-linux-gnueabihf.so' 2019-11-20T15:17:04 adding 'camoco/RefGenDist.pyx' 2019-11-20T15:17:04 adding 'camoco/Term.py' 2019-11-20T15:17:04 adding 'camoco/Tools.py' 2019-11-20T15:17:04 adding 'camoco/__init__.py' 2019-11-20T15:17:04 adding 'camoco/cli/__init__.py' 2019-11-20T15:17:04 adding 'camoco/cli/camoco' 2019-11-20T15:17:04 adding 'camoco/cli/commands/Analysis.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/__init__.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/build.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/cistrans.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/crossRef.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/geneneighbors.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/health.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/list.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/locality.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/plotGWAS.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/remove.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/simulateGWAS.py' 2019-11-20T15:17:04 adding 'camoco/cli/commands/snp2gene.py' 2019-11-20T15:17:04 adding 'camoco-0.6.4.data/scripts/camoco' 2019-11-20T15:17:04 adding 'camoco-0.6.4.dist-info/METADATA' 2019-11-20T15:17:04 adding 'camoco-0.6.4.dist-info/WHEEL' 2019-11-20T15:17:04 adding 'camoco-0.6.4.dist-info/top_level.txt' 2019-11-20T15:17:04 adding 'camoco-0.6.4.dist-info/RECORD' 2019-11-20T15:17:04 removing build/bdist.linux-armv7l/wheel 2019-11-20T15:17:05 Building wheel for camoco (setup.py): finished with status 'done' 2019-11-20T15:17:05 Stored in directory: /tmp/tmp6llp_d5m 2019-11-20T15:17:05 Successfully built camoco 2019-11-20T15:17:05 Cleaning up... 2019-11-20T15:17:05 Removing source in /tmp/pip-wheel-y3zmyf50/camoco 2019-11-20T15:17:05 Removed build tracker '/tmp/pip-req-tracker-9vn9tfvy'