2019-11-20T17:06:40 Created temporary directory: /tmp/pip-ephem-wheel-cache-nrs_q42r 2019-11-20T17:06:40 Created temporary directory: /tmp/pip-req-tracker-yggbvwtn 2019-11-20T17:06:40 Created requirements tracker '/tmp/pip-req-tracker-yggbvwtn' 2019-11-20T17:06:40 Created temporary directory: /tmp/pip-wheel-_jjlrr2_ 2019-11-20T17:06:40 Collecting nifstd-tools==0.0.1 2019-11-20T17:06:40 1 location(s) to search for versions of nifstd-tools: 2019-11-20T17:06:40 * https://pypi.org/simple/nifstd-tools/ 2019-11-20T17:06:40 Getting page https://pypi.org/simple/nifstd-tools/ 2019-11-20T17:06:41 Analyzing links from page https://pypi.org/simple/nifstd-tools/ 2019-11-20T17:06:41 Found link https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.1 2019-11-20T17:06:41 Using version 0.0.1 (newest of versions: 0.0.1) 2019-11-20T17:06:41 Created temporary directory: /tmp/pip-unpack-8ujqetgu 2019-11-20T17:06:41 Downloading https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz (147kB) 2019-11-20T17:06:41 Downloading from URL https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2019-11-20T17:06:41 Added nifstd-tools==0.0.1 from https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 to build tracker '/tmp/pip-req-tracker-yggbvwtn' 2019-11-20T17:06:41 Running setup.py (path:/tmp/pip-wheel-_jjlrr2_/nifstd-tools/setup.py) egg_info for package nifstd-tools 2019-11-20T17:06:41 Running command python setup.py egg_info 2019-11-20T17:06:43 running egg_info 2019-11-20T17:06:43 creating pip-egg-info/nifstd_tools.egg-info 2019-11-20T17:06:43 writing pip-egg-info/nifstd_tools.egg-info/PKG-INFO 2019-11-20T17:06:43 writing dependency_links to pip-egg-info/nifstd_tools.egg-info/dependency_links.txt 2019-11-20T17:06:43 writing entry points to pip-egg-info/nifstd_tools.egg-info/entry_points.txt 2019-11-20T17:06:43 writing requirements to pip-egg-info/nifstd_tools.egg-info/requires.txt 2019-11-20T17:06:43 writing top-level names to pip-egg-info/nifstd_tools.egg-info/top_level.txt 2019-11-20T17:06:43 writing manifest file 'pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2019-11-20T17:06:43 reading manifest file 'pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2019-11-20T17:06:43 writing manifest file 'pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2019-11-20T17:06:43 Source in /tmp/pip-wheel-_jjlrr2_/nifstd-tools has version 0.0.1, which satisfies requirement nifstd-tools==0.0.1 from https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 2019-11-20T17:06:43 Removed nifstd-tools==0.0.1 from https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 from build tracker '/tmp/pip-req-tracker-yggbvwtn' 2019-11-20T17:06:43 Building wheels for collected packages: nifstd-tools 2019-11-20T17:06:43 Created temporary directory: /tmp/pip-wheel-wa1dseca 2019-11-20T17:06:43 Building wheel for nifstd-tools (setup.py): started 2019-11-20T17:06:43 Destination directory: /tmp/pip-wheel-wa1dseca 2019-11-20T17:06:43 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-_jjlrr2_/nifstd-tools/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wa1dseca 2019-11-20T17:06:45 running bdist_wheel 2019-11-20T17:06:45 running build 2019-11-20T17:06:45 running build_py 2019-11-20T17:06:45 creating build 2019-11-20T17:06:45 creating build/lib 2019-11-20T17:06:45 creating build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/extracting_pmids_from_neurolex.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/ncbigene_slim.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/dumpnlx.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/hbp_parc_output.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/fragment_map.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/allen_transgenic_lines.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/aba_uberon.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/nifgafix.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/slimgen.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/chebi_slim.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/ksdesc_bridge.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/utils.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/hbp_cells.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/__init__.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/scr_sync.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/sheets_sparc.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/chebi_bridge.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/nif_cell.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/cocomac_uberon.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/mapnlxilx.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/docs.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/hbp_merge.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/gen_nat_models.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 copying nifstd_tools/ontree.py -> build/lib/nifstd_tools 2019-11-20T17:06:45 running build_scripts 2019-11-20T17:06:45 creating build/scripts-3.7 2019-11-20T17:06:45 copying bin/ttlcmp -> build/scripts-3.7 2019-11-20T17:06:45 installing to build/bdist.linux-armv7l/wheel 2019-11-20T17:06:45 running install 2019-11-20T17:06:45 running install_lib 2019-11-20T17:06:45 creating build/bdist.linux-armv7l 2019-11-20T17:06:45 creating build/bdist.linux-armv7l/wheel 2019-11-20T17:06:45 creating build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/extracting_pmids_from_neurolex.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/ncbigene_slim.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/dumpnlx.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/hbp_parc_output.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/fragment_map.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/allen_transgenic_lines.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/aba_uberon.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/nifgafix.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/slimgen.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/chebi_slim.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/ksdesc_bridge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/utils.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/hbp_cells.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/__init__.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/scr_sync.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/sheets_sparc.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/chebi_bridge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/nif_cell.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/cocomac_uberon.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/mapnlxilx.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/docs.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/hbp_merge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/gen_nat_models.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 copying build/lib/nifstd_tools/ontree.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2019-11-20T17:06:45 running install_egg_info 2019-11-20T17:06:45 running egg_info 2019-11-20T17:06:45 writing nifstd_tools.egg-info/PKG-INFO 2019-11-20T17:06:45 writing dependency_links to nifstd_tools.egg-info/dependency_links.txt 2019-11-20T17:06:45 writing entry points to nifstd_tools.egg-info/entry_points.txt 2019-11-20T17:06:45 writing requirements to nifstd_tools.egg-info/requires.txt 2019-11-20T17:06:45 writing top-level names to nifstd_tools.egg-info/top_level.txt 2019-11-20T17:06:45 reading manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2019-11-20T17:06:45 writing manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2019-11-20T17:06:45 Copying nifstd_tools.egg-info to build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1-py3.7.egg-info 2019-11-20T17:06:45 running install_scripts 2019-11-20T17:06:45 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1.data 2019-11-20T17:06:45 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1.data/scripts 2019-11-20T17:06:45 copying build/scripts-3.7/ttlcmp -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1.data/scripts 2019-11-20T17:06:45 changing mode of build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1.data/scripts/ttlcmp to 755 2019-11-20T17:06:45 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2019-11-20T17:06:45 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.1.dist-info/WHEEL 2019-11-20T17:06:45 creating '/tmp/pip-wheel-wa1dseca/nifstd_tools-0.0.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-11-20T17:06:45 adding 'nifstd_tools/__init__.py' 2019-11-20T17:06:45 adding 'nifstd_tools/aba_uberon.py' 2019-11-20T17:06:45 adding 'nifstd_tools/allen_transgenic_lines.py' 2019-11-20T17:06:45 adding 'nifstd_tools/chebi_bridge.py' 2019-11-20T17:06:45 adding 'nifstd_tools/chebi_slim.py' 2019-11-20T17:06:45 adding 'nifstd_tools/cocomac_uberon.py' 2019-11-20T17:06:45 adding 'nifstd_tools/docs.py' 2019-11-20T17:06:45 adding 'nifstd_tools/dumpnlx.py' 2019-11-20T17:06:45 adding 'nifstd_tools/extracting_pmids_from_neurolex.py' 2019-11-20T17:06:45 adding 'nifstd_tools/fragment_map.py' 2019-11-20T17:06:45 adding 'nifstd_tools/gen_nat_models.py' 2019-11-20T17:06:45 adding 'nifstd_tools/hbp_cells.py' 2019-11-20T17:06:45 adding 'nifstd_tools/hbp_merge.py' 2019-11-20T17:06:45 adding 'nifstd_tools/hbp_parc_output.py' 2019-11-20T17:06:45 adding 'nifstd_tools/ksdesc_bridge.py' 2019-11-20T17:06:45 adding 'nifstd_tools/mapnlxilx.py' 2019-11-20T17:06:45 adding 'nifstd_tools/ncbigene_slim.py' 2019-11-20T17:06:45 adding 'nifstd_tools/nif_cell.py' 2019-11-20T17:06:45 adding 'nifstd_tools/nifgafix.py' 2019-11-20T17:06:45 adding 'nifstd_tools/ontree.py' 2019-11-20T17:06:45 adding 'nifstd_tools/scr_sync.py' 2019-11-20T17:06:45 adding 'nifstd_tools/sheets_sparc.py' 2019-11-20T17:06:45 adding 'nifstd_tools/slimgen.py' 2019-11-20T17:06:45 adding 'nifstd_tools/utils.py' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.data/scripts/ttlcmp' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/LICENSE' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/METADATA' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/WHEEL' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/entry_points.txt' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/top_level.txt' 2019-11-20T17:06:45 adding 'nifstd_tools-0.0.1.dist-info/RECORD' 2019-11-20T17:06:45 removing build/bdist.linux-armv7l/wheel 2019-11-20T17:06:46 Building wheel for nifstd-tools (setup.py): finished with status 'done' 2019-11-20T17:06:46 Stored in directory: /tmp/tmp49jpejbw 2019-11-20T17:06:46 Successfully built nifstd-tools 2019-11-20T17:06:46 Cleaning up... 2019-11-20T17:06:46 Removing source in /tmp/pip-wheel-_jjlrr2_/nifstd-tools 2019-11-20T17:06:46 Removed build tracker '/tmp/pip-req-tracker-yggbvwtn'